Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq4 170 4e-37
seq2 120 6e-22
seq3 111 3e-19
seq5 86.0 1e-11
>seq4
Length=4536433
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| |||||||| | || |||||||| || ||| ||| || || ||||| || || ||
Sbjct 670985 CCACCGCGAAGTCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAT 671044
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || || ||||| ||||| || || | || |||||||| || |||
Sbjct 671045 AGAGTGCGGCCATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGA 671104
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|||||||||||||| |||||||| | ||||||| || |||||||| | || || |||
Sbjct 671105 ATGCCTTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCACT 671164
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || ||||| || ||||| || || |||||||| || ||||||||
Sbjct 671165 TCTAAAGTGATCGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| | | ||||| || || ||||| || || |||||||| || |||||
Sbjct 671213 CCACCACGAAGTCTGAGTACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAA 671272
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || ||||| | ||||| || ||||| || | || ||||||||| |||||
Sbjct 671273 AGAGTTCGGCCGTCTTCGAGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGGG 671332
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||||||||| ||||| | || ||| || || ||||||| ||||||||
Sbjct 671333 ATACCCTCCTTGTCTTGGATCTTGGATTTCACGTTGTCAATAGTGTCTGACGATTCTACA 671392
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| |||||||||||| || ||||| ||||||||||| || |||||
Sbjct 671393 TCCAGGGTGATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 671439
Score = 147 bits (162), Expect = 4e-30
Identities = 153/198 (77%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324
||||| ||||| |||||||| |||||| | || | || ||||| | ||||| |||
Sbjct 671471 GTGGATTCTTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCGTCTTCAAGTTGCTTTCCG 671530
Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384
||||| || || | || |||||||| |||||||||||||||||||||||||| | |||
Sbjct 671531 GCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCTTGAATCTTGGATTTG 671590
Query 68385 ACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGT 68443
||| |||||||| || ||| ||||| || || | || ||||| || || || || ||
Sbjct 671591 ACGTTGTCGATGGTATC-GCTCGATTCGACCTCGAGCGTAATGGTCTTGCCGGTAAGAGT 671649
Query 68444 CTTGACGAATATCTGCAT 68461
||||||||| || |||||
Sbjct 671650 CTTGACGAAGATTTGCAT 671667
Score = 131 bits (144), Expect = 3e-25
Identities = 154/206 (75%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | ||||||||||| || || || ||||||||||| || |||
Sbjct 671669 CCACCACGGAGACGGAGAACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTC 671728
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | || ||||| | ||||| |||||||| || || | || |||||||| |||
Sbjct 671729 AAGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGA 671788
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
|||||||||||||| || ||||| | ||||| || |||||||| ||| ||||| ||
Sbjct 671789 ATGCCTTCCTTGTCCTGGATCTTGGATTTGACATTGTCAATGGTGTC-GCTCGATTCGAC 671847
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGA 68439
|| | |||||||| ||||| ||||
Sbjct 671848 CTCGAGCGTGATGGTCTTTCCGGTGA 671873
>seq2
Length=8083196
Score = 120 bits (132), Expect = 6e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
||||||||||| || ||| | || | ||||| || | ||||| |||||||| ||
Sbjct 5300564 TTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGATC 5300505
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || ||||| ||||| || |||||||||||||| ||||| | ||| || |||
Sbjct 5300504 AGGCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTAACATTGTCG 5300445
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | || || || || | ||||||||| || ||||| ||||||||||||||
Sbjct 5300444 ATCGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 5300386
Score = 96.9 bits (106), Expect = 6e-15
Identities = 94/121 (78%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 225514 GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTC 225573
|||||| || ||||| |||||||||||||||| ||||||||||| || ||||| || ||
Sbjct 7862078 GAGCCAGGCAACGTTCTTGACGTCCATGTGGTTCGTAGGTTCGTCGAGCAGCAGAATATC 7862019
Query 225574 AGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGA 225633
|| || || ||| || | ||||| ||||||||| |||||||| || || || ||
Sbjct 7862018 AGGGGTTTCGAAGACGGCACGGGCGAGAGCCAGCTTCATCTTCCAGCCACCCGAGAGCGA 7861959
Query 225634 G 225634
|
Sbjct 7861958 G 7861958
>seq3
Length=7540789
Score = 111 bits (122), Expect = 3e-19
Identities = 106/136 (78%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293
||| || || ||||| | |||| ||| || || ||||| || |||||||| || |||||
Sbjct 3360428 TCCACCACGCAGGCGGAGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 3360369
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353
||| || | || ||||| | ||||| |||||||| ||||| | ||| ||||| || ||
Sbjct 3360368 GAGAGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATGAGGCGTTGCTGGTCTGGCGG 3360309
Query 68354 AATGCCTTCCTTGTCT 68369
|||||||||||||||
Sbjct 3360308 GATGCCTTCCTTGTCT 3360293
>seq5
Length=4186638
Score = 86.0 bits (94), Expect = 1e-11
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
||||| |||| |||||||||| | || | | |||||||| || || || || |||||
Sbjct 1000382 CCATCCTCTAGCTGCTTCCCGCCAAACACCAACCTTTGTTGATCTGGCGGTATACCTTCT 1000441
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||||||||| || || ||||| || |||||| ||| | | ||| || ||
Sbjct 1000442 TTGTCTTGAATTTTGGCTTTGACCGCGCTGATGGTATCTTCCCACAAGACTCGCAGTGTT 1000501
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATAT 68455
|| ||||| || || | |||||||| ||| ||
Sbjct 1000502 ATAGTTTTCCCGGTCAAGGTCTTGATGAAAAT 1000533
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621973749640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |