Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq4 170 4e-37 seq2 120 6e-22 seq3 111 3e-19 seq5 86.0 1e-11 >seq4 Length=4536433 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || |||||||| | || |||||||| || ||| ||| || || ||||| || || || Sbjct 670985 CCACCGCGAAGTCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAT 671044 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || || ||||| ||||| || || | || |||||||| || ||| Sbjct 671045 AGAGTGCGGCCATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGA 671104 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| |||||||| | ||||||| || |||||||| | || || ||| Sbjct 671105 ATGCCTTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCACT 671164 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || ||||| || ||||| || || |||||||| || |||||||| Sbjct 671165 TCTAAAGTGATCGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| | | ||||| || || ||||| || || |||||||| || ||||| Sbjct 671213 CCACCACGAAGTCTGAGTACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAA 671272 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | ||||| || ||||| || | || ||||||||| ||||| Sbjct 671273 AGAGTTCGGCCGTCTTCGAGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGGG 671332 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| | || ||| || || ||||||| |||||||| Sbjct 671333 ATACCCTCCTTGTCTTGGATCTTGGATTTCACGTTGTCAATAGTGTCTGACGATTCTACA 671392 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| |||||||||||| || ||||| ||||||||||| || ||||| Sbjct 671393 TCCAGGGTGATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 671439 Score = 147 bits (162), Expect = 4e-30 Identities = 153/198 (77%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324 ||||| ||||| |||||||| |||||| | || | || ||||| | ||||| ||| Sbjct 671471 GTGGATTCTTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCGTCTTCAAGTTGCTTTCCG 671530 Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384 ||||| || || | || |||||||| |||||||||||||||||||||||||| | ||| Sbjct 671531 GCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCTTGAATCTTGGATTTG 671590 Query 68385 ACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGT 68443 ||| |||||||| || ||| ||||| || || | || ||||| || || || || || Sbjct 671591 ACGTTGTCGATGGTATC-GCTCGATTCGACCTCGAGCGTAATGGTCTTGCCGGTAAGAGT 671649 Query 68444 CTTGACGAATATCTGCAT 68461 ||||||||| || ||||| Sbjct 671650 CTTGACGAAGATTTGCAT 671667 Score = 131 bits (144), Expect = 3e-25 Identities = 154/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | ||||||||||| || || || ||||||||||| || ||| Sbjct 671669 CCACCACGGAGACGGAGAACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTC 671728 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | || ||||| | ||||| |||||||| || || | || |||||||| ||| Sbjct 671729 AAGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGA 671788 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 |||||||||||||| || ||||| | ||||| || |||||||| ||| ||||| || Sbjct 671789 ATGCCTTCCTTGTCCTGGATCTTGGATTTGACATTGTCAATGGTGTC-GCTCGATTCGAC 671847 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGA 68439 || | |||||||| ||||| |||| Sbjct 671848 CTCGAGCGTGATGGTCTTTCCGGTGA 671873 >seq2 Length=8083196 Score = 120 bits (132), Expect = 6e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 ||||||||||| || ||| | || | ||||| || | ||||| |||||||| || Sbjct 5300564 TTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGATC 5300505 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| ||||| || |||||||||||||| ||||| | ||| || ||| Sbjct 5300504 AGGCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTAACATTGTCG 5300445 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | || || || || | ||||||||| || ||||| |||||||||||||| Sbjct 5300444 ATCGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 5300386 Score = 96.9 bits (106), Expect = 6e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 225514 GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTC 225573 |||||| || ||||| |||||||||||||||| ||||||||||| || ||||| || || Sbjct 7862078 GAGCCAGGCAACGTTCTTGACGTCCATGTGGTTCGTAGGTTCGTCGAGCAGCAGAATATC 7862019 Query 225574 AGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGA 225633 || || || ||| || | ||||| ||||||||| |||||||| || || || || Sbjct 7862018 AGGGGTTTCGAAGACGGCACGGGCGAGAGCCAGCTTCATCTTCCAGCCACCCGAGAGCGA 7861959 Query 225634 G 225634 | Sbjct 7861958 G 7861958 >seq3 Length=7540789 Score = 111 bits (122), Expect = 3e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293 ||| || || ||||| | |||| ||| || || ||||| || |||||||| || ||||| Sbjct 3360428 TCCACCACGCAGGCGGAGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 3360369 Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 ||| || | || ||||| | ||||| |||||||| ||||| | ||| ||||| || || Sbjct 3360368 GAGAGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATGAGGCGTTGCTGGTCTGGCGG 3360309 Query 68354 AATGCCTTCCTTGTCT 68369 ||||||||||||||| Sbjct 3360308 GATGCCTTCCTTGTCT 3360293 >seq5 Length=4186638 Score = 86.0 bits (94), Expect = 1e-11 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 ||||| |||| |||||||||| | || | | |||||||| || || || || ||||| Sbjct 1000382 CCATCCTCTAGCTGCTTCCCGCCAAACACCAACCTTTGTTGATCTGGCGGTATACCTTCT 1000441 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||||||||| || || ||||| || |||||| ||| | | ||| || || Sbjct 1000442 TTGTCTTGAATTTTGGCTTTGACCGCGCTGATGGTATCTTCCCACAAGACTCGCAGTGTT 1000501 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATAT 68455 || ||||| || || | |||||||| ||| || Sbjct 1000502 ATAGTTTTCCCGGTCAAGGTCTTGATGAAAAT 1000533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621973749640