Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2 279 1e-69 seq6 264 2e-65 >seq2 Length=8083196 Score = 279 bits (308), Expect = 1e-69 Identities = 1115/1725 (65%), Gaps = 83/1725 (5%) Strand=Plus/Plus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| |||| |||| ||||| || ||| |||| | |||||||||||||| ||||| Sbjct 1632009 ACGGTGAATTGGATCGGTGCCGTCGCAGCCATGGTGCGGAGGTAGTACATGCCTGTCTTC 1632068 Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856 || || | |||| || || |||||| | || | ||| ||| | ||| Sbjct 1632069 AGGCCCATCTTCCAGCCGGCGAAGTGCATCGAGGTGATCTTGCCCATGGTTGGCT----- 1632123 Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTC 243915 ||| | ||| | ||| ||||| ||| || || | ||||| |||| || || Sbjct 1632124 ----CCTTG---AGATGAATGTTAAGGGATTGGGATTGATCAATGAAGG-CGCCACGATC 1632175 Query 243916 TGCGGCCATGGTGATGA-GGTCCTTCTGA--GATATCTCATACGCCGTCTTGTAGATGGG 243972 |||||||| || | ||| | | ||| ||| || || || ||||| |||| || Sbjct 1632176 CGCGGCCATTTGGAGTACGGTGCGT-TGACTGATTTCCCAGACA--GTCTTATAGAGGGC 1632232 Query 243973 CTTGAGGTGCTCGGGGAACCCTTCG--ATGTTCTGCACCGAGCCCTTGTGGACGATGAGC 244030 |||||||| |||||| || | | ||| || | ||| || | | |||||| Sbjct 1632233 CTTGAGGTCGGCGGGGATG--TTGGGAACGTTTTGGATCGATCCACCATCGGCGATGATG 1632290 Query 244031 TGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCT- 244089 || | |||||| || ||| || |||| | | || || |||| ||| Sbjct 1632291 CGGTTCTTCATGTTGTCTGACCAGAGACCCATGTCGACAAGATCCCT---CAGGAGCCAT 1632347 Query 244090 --GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGC 244147 ||| || || || ||||| || | ||| || ||||| ||| | ||| | || Sbjct 1632348 GGGTTGACAACTTGGAACTCGCCTGCCAGGACACGGCGGGAGTATATGTTCGAGGTGTAG 1632407 Query 244148 GGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGAC 244207 || |||| || || |||||||||| ||||| | ||| |||||| |||||||| | Sbjct 1632408 GGTTCGAAGCATTCGTTGTTGCCCAGGATCTGAGAAGTGGACGCAGTAGGCATGGGAGCG 1632467 Query 244208 ACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATG-CGGAGTCTGAGCTCGTTCCAGTC 244266 || || || ||| | || || ||| | || ||| | | ||| || |||||| Sbjct 1632468 ACGAGGAGGGAGTTGCGGACACCATGCTTAGCAATCTCGGCCTTT-AGCGAGTCCCAGTC 1632526 Query 244267 CCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTT 244326 ||| | | | ||| | ||| | |||||| ||| |||| || | || | Sbjct 1632527 CCATAGGTCTGAGGGAG---------TGACGTTCCACATATCATACTGGAGGATACCTTG 1632577 Query 244327 GCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCT 244386 | ||| |||||||| ||||| |||| ||| || || || ||| || || | ||| Sbjct 1632578 GGAGACTGGGCTGCCTTCGTATGTCGAGTAAGGCCCCTCTTCCTGCGCGAGTTCACACGA 1632637 Query 244387 CTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTT 244446 || |||||| |||| ||||||||| |||||||| | || | | || |||| Sbjct 1632638 GGCGGTGAGGGCAGCGTGGTAGATGGTTTCGAAGATTTGGGTATTGAGTTGACGAGCCT- 1632696 Query 244447 GCCGCAG-GT-GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCG 244504 ||| || || ||| || | | || | ||| | || || || || || || ||| Sbjct 1632697 -CCGGAGAGTCGAAAGGAAGACGCAGAGCGAGGAAAGCATCTGCGAGGCCTTGAACACCG 1632755 Query 244505 ATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTG 244564 | ||| || |||| |||||| |||| | | || || || || ||||| ||||| Sbjct 1632756 AGGCCAATAGGTCGGTGTCGGAAGTTGCTCTTCTTCGCCTCCGGGACCGGGTAGTAGTTG 1632815 Query 244565 CCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGA 244624 | ||||| | |||||| | |||||| |||| | ||||||| ||| || | Sbjct 1632816 ACATCGATGATCTTGTTCAAGTTGCGAGTGACGACTTGGACGACCTCGTGGAGACGACCG 1632875 Query 244625 AAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACG 244684 ||||| |||||| |||||| | | ||||| | ||| | | ||||| | | Sbjct 1632876 AAGTCATACTCG-------CCTCGG-GCT--TGATCGACG-AAAGTGGGA-AGGGCCAGG 1632923 Query 244685 CTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAG 244744 ||| || |||||||| || ||||| || | |||||| | ||||||||| ||||| Sbjct 1632924 GAGGCAAGATTGCAGACTGCAACCTCATCAGGTGCGGTGTATTCGACAATCTCTGTGCAC 1632983 Query 244745 AGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCC 244804 | ||| | | ||| || ||||| | || || ||| ||| |||||| || ||| Sbjct 1632984 AAGTTGGAACTCCGGATTGTTCCCAGATTCTTCTGGTTGCTCTTCTTGTTGCACGCATCC 1633043 Query 244805 TTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGG 244864 || || |||||| | ||| ||| |||||| || | |||| | | | ||| || Sbjct 1633044 TTATAAAGCATGTATGGCGTCCCAGTCTCGGTTTGAGACTCGAGAATGGCATACCACAGC 1633103 Query 244865 TCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCT-CTGCCTCGTAGCGGGTGTACAGGGC 244923 | | ||||||| ||| ||| ||| | ||| | |||||| ||| || || Sbjct 1633104 TTCTGGGCCTTGATGGTCTGTCGA-CCTCGTCCTTCCTTCTCGTACTTCTCGTAGAGTGC 1633162 Query 244924 CTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACT 244983 |||||||||| || |||| || | || || ||| | ||||| | ||| | Sbjct 1633163 CTCGAACTCGTCACCGTAGACATCAGCAAGACCAGGGGCCTCGTGTGGGCAGAAGAGTGT 1633222 Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043 ||| || | || || | |||||||||||| || ||| |||| ||||| | ||| Sbjct 1633223 CCAGTCTTGATTCTTCTCAACACGCTGCATGAAGAGATCCGGGGTCCAAAGGGCGTAGAA 1633282 Query 245044 GAGGTCCCTGGTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCA 245101 | ||| | || ||||| || ||| ||| |||||| | ||| | |||||||||| Sbjct 1633283 CAAGTCAC--GTGCTCTGACTTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAAAAGTCA 1633340 Query 245102 AAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCT 245161 |||||||| ||||||| || || | ||||| || | || || || ||||||||||| Sbjct 1633341 AAGACGTCAGCGTGCCATGGTTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCA 1633400 Query 245162 CCCTGGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCC 245217 || ||||| | | | ||| ||| |||||| | ||||| | || | | || Sbjct 1633401 CCTTGGTCGA----CATATCGGGCGGTGTTGTTGAAAACACGCAGCATGGGAATGAGACC 1633456 Query 245218 GTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCC-CTTGCCCCTGAGGTTGCTGATGG 245276 ||| ||| || |||||||| ||||| | || |||||| || ||| | || Sbjct 1633457 GTTGGAGGTACCATTGGTGCCGGCAATGTAAGAACCGGTTGCCC----GGATGCAG-TGA 1633511 Query 245277 ACAT----GCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCT 245332 ||| || | ||||| || ||||||||| | ||| ||| |||||| ||||| Sbjct 1633512 GCATTGAGTCCAATGCCGCCAGCAGTCTTGGAGATCATGGCACAGATCTTGAGAGTGTCG 1633571 Query 245333 GCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGC 245392 || ||||| ||||| || |||||||| | || ||||| |||||||| | |||| Sbjct 1633572 TAGATACCCTCAATGCTATCTTCCTTCATGTCAATCAAGAAGCATGAGGACAG-TTGGGC 1633630 Query 245393 TTG-GGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAA 245436 ||| || ||| | |||||| ||||| ||| ||||| ||||| Sbjct 1633631 TTGAGGTGTGCCGGCGTTGAAGAGAGTCGGGGAAGCGTGTGTAAA 1633675 >seq6 Length=1840879 Score = 264 bits (292), Expect = 2e-65 Identities = 376/526 (71%), Gaps = 5/526 (1%) Strand=Plus/Plus Query 42618 GCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAG 42677 ||||| || ||||| ||||||||| ||||| || || ||||| | || |||||| | Sbjct 490465 GCCATTGACACGATTCCCTGCATCCGCAAGAAAGCCGATTGGGCATTGAAGTGGATCTCG 490524 Query 42678 AGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTC 42737 || | | |||| | | | || || || || ||||||||||||| || ||| Sbjct 490525 GACAAGGAGTCCAGCTTCGCCCAACGACTCGTGGCGTTCGCCGCCGTCGAGGGTATTTTC 490584 Query 42738 TTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC-GATGCCCGGACT 42796 ||||| ||| | ||||| |||||||||||||| ||| |||| ||| ||||||||| || Sbjct 490585 TTCTCCGGCTCTTTCGCGTCCATCTTCTGGCTGAAGAGCAAGG-GTCTGATGCCCGGCCT 490643 Query 42797 CACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCT 42856 |||||||| || ||||||||| | |||||||| |||| | |||||||||||||| Sbjct 490644 GACCTTCTCCAATGAACTCATCTCGCGCGACGAGGGCATGCACACCGACTTTGCCTGCCT 490703 Query 42857 CCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCAC 42916 ||| | | || | | ||||||| | | || | || ||||||||| Sbjct 490704 GCTGATGCAG---CATTTGAAGCACAAGGCAGACCCCGCGCTGATCGAACACATCATCAC 490760 Query 42917 GGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGG 42976 || ||||||| ||||||||||| ||||| || | | || ||||| |||| | || Sbjct 490761 CGAAGCCGTGGGCATCGAGAAGGAATTCCTGACCGATGCTCTTCCCGTCGGCCTGTTGGG 490820 Query 42977 CATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCA 43036 |||||| | | || ||| |||||||| ||| ||||||||||| || ||| | Sbjct 490821 AATGAACGCCAAGCTGATGCAACAGTACATCGAGTTCGTCGCCGACCGCCTGCTGCTCGC 490880 Query 43037 GATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTC 43096 |||| || ||| |||||||| | | | ||||||| ||| |||||||||||||| Sbjct 490881 CCTGGGCAACAAGCGCGTCTACAACGCCCAGAACCCCTTCCCCTTCATGGAGAACATCTC 490940 Query 43097 GTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTAC 43142 | | | |||||||||||| || |||||||| || |||| ||||||| Sbjct 490941 GCTCGCGGGCAAGACCAATTTCTTCGAGAAACGTGTCGGCGACTAC 490986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338763243120