Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq4 167 6e-36
seq2 114 3e-20
>seq4
Length=4536433
Score = 167 bits (184), Expect = 6e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || ||||| ||||| ||||||| ||| ||| || ||||| || |||||||
Sbjct 671213 CCACCACGAAGTCTGAGTACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAA 671272
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || |||||||| | ||| || ||||||||||||| || ||||| ||||
Sbjct 671273 AGAGTTCGGCCGTCTTCGAGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGGG 671332
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || || ||||| || | ||||||||| || |||| || |||||||||
Sbjct 671333 ATACCCTCCTTGTCTTGGATCTTGGATTTCACGTTGTCAATAGTGTCTGACGATTCTACA 671392
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| || || ||||| |||||||||||||| || |||||
Sbjct 671393 TCCAGGGTGATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 671439
Score = 163 bits (180), Expect = 7e-35
Identities = 176/232 (76%), Gaps = 1/232 (0%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| || || ||||||| || |||||||| | ||| |||||| ||||| || || |
Sbjct 671437 CATG-CCGCCACGGAGTCGGAGGACGAGATGCAAGGTGGATTCTTTCTGGATGTTGTAAT 671495
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
|| | ||||| |||||||| | ||| ||||| ||||||||||| ||||| ||
Sbjct 671496 CGCTCAAGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGG 671555
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
|| || ||||| || || || || || | ||| ||||| || || | |||||||||||
Sbjct 671556 GAGGAATGCCTTCCTTGTCTTGAATCTTGGATTTGACGTTGTCGATGGTATCGCTCGATT 671615
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || |||||||| || ||||| ||||| |||||||||||||| || |||||
Sbjct 671616 CGACCTCGAGCGTAATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 671667
Score = 132 bits (146), Expect = 1e-25
Identities = 170/233 (73%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
|| |||||||| ||||| || || | || | ||||| || || || || || |||||
Sbjct 670982 TGACCACCGCGAAGTCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCA 671041
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
| || ||||| || || || ||||| || || || ||||||| |||||||| |||
Sbjct 671042 GATAGAGTGCGGCCATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGG---TCT 671098
Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420
||| || ||||| || ||||| || |||| || ||||| || || | || ||
Sbjct 671099 GGGGGAATGCCTTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGAC 671158
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| | ||||||||||| || |||||||||||||| || ||||||||
Sbjct 671159 TCCACTTCTAAAGTGATCGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211
Score = 123 bits (136), Expect = 6e-23
Identities = 128/168 (76%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| |||||||| || |||||| | ||||| |||||||| | ||| ||||| |||||
Sbjct 671704 TTCCTTTTGGATGTTGTAGTCGCTCAAGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCGAA 671763
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|||||| ||||| || || || ||||| || |||||||| || | ||| || ||
Sbjct 671764 GATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGGATCTTGGATTTGACATT 671823
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGT 288449
|| || | ||||||||||| || ||||||||||| ||||| |||||
Sbjct 671824 GTCAATGGTGTCGCTCGATTCGACCTCGAGCGTGATGGTCTTTCCGGT 671871
>seq2
Length=8083196
Score = 114 bits (126), Expect = 3e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || | |||||| || || || | || || ||||| |||| ||||||||
Sbjct 3687720 CCACCTCGCAATCTAAGCACAAGGTGCAGGGTTGACTCCTTTTGAATATCATAGTCGGAA 3687779
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | || || |||||||| |||||||||||||||| || |||||| ||||
Sbjct 3687780 AGAGTTCTACCATCCTCTAATTGCTTTCCTGCGAAGATCAACCGTTGTTGATCTGGTGGG 3687839
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || ||||| ||||| || | || || || || | || ||||| ||||| ||
Sbjct 3687840 ATGCCCTCCTTATCTTGGATCTTAGACTTGACATTGTCGACAGTGTCGCTGGATTCGACC 3687899
Query 288427 TCGAGCGTGATCGTCTTCCCGGT 288449
|| || || || ||||| |||||
Sbjct 3687900 TCAAGTGTAATGGTCTTGCCGGT 3687922
Score = 107 bits (118), Expect = 5e-18
Identities = 131/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|||||||| || |||||| | ||||| || || || | ||| || || |||||||||
Sbjct 5300564 TTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGATC 5300505
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
|| ||||| || |||||||||||| || || ||||| || | || || || ||
Sbjct 5300504 AGGCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTAACATTGTCG 5300445
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | ||| ||| || || || || ||||| ||||| || ||||| |||||||||||
Sbjct 5300444 ATCGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 5300386
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179653840770086
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |