Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq6 136 9e-27 seq1 95.1 3e-14 seq3 84.2 5e-11 >seq6 Length=1840879 Score = 136 bits (150), Expect = 9e-27 Identities = 287/420 (68%), Gaps = 6/420 (1%) Strand=Plus/Plus Query 243318 CGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCG-CCATCTTTTGGCTGCGGAACAAAG 243376 ||| || |||||| | || ||||| |||| ||| ||||||| |||||| || ||| | Sbjct 490569 CGTCGAGGGTATTTTCTTCTCCGGCTCTTTC-GCGTCCATCTTCTGGCTGAAGAGCAAGG 490627 Query 243377 GTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACC 243436 || ||||||| ||||| | || || || ||||| |||||||||||| | ||| Sbjct 490628 GTCTGATGCCCGGCCTGACCTTCTCCAATGAACTCATCTCGCGCGACGAGGGCATGCACA 490687 Query 243437 AACAGTTCGGTGAGCTTATGTATTCAA-AGCTCCAGAACAAGCTACCATTCGAAACGGTC 243495 | || | || || || || | | || ||||| | || | || Sbjct 490688 CCGACTTTGCCTGCCTGCTG-ATGCAGCATTTGAAGCACAAGGCAGACCCCGCGCTGATC 490746 Query 243496 AAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCA 243555 |||| |||||||| ||||| || | | ||| ||||||||| | ||| ||| |||| Sbjct 490747 GAACACATCATCACCGAAGCCGTGGGCATCGAGAAGGAATTCCTGACCGATGCTCTTCCC 490806 Query 243556 TGCCGGCTTATTGGCA-TGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGA 243614 | |||| | |||| | ||||| | | || ||| |||||||||||| ||||| ||||| Sbjct 490807 -GTCGGCCTGTTGGGAATGAACGCCAAGCTGATGCAACAGTACATCGAGTTCGTCGCCGA 490865 Query 243615 CCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTT 243674 |||| | | |||| || || | || || |||||| || |||||||||| |||| Sbjct 490866 CCGCCTGCTGCTCGCCCTGGGCAACAAGCGCGTCTACAACGCCCAGAACCCCTTCCCCTT 490925 Query 243675 TATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTA 243734 |||||| ||| ||||| || || || || |||||||| || |||||| | || || Sbjct 490926 CATGGAGAACATCTCGCTCGCGGGCAAGACCAATTTCTTCGAGAAACGTGTCGGCGACTA 490985 >seq1 Length=8684298 Score = 95.1 bits (104), Expect = 3e-14 Identities = 183/267 (69%), Gaps = 5/267 (2%) Strand=Plus/Minus Query 333726 TTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGG 333785 || ||||| |||| || || |||||||| | | |||||| || |||| || || Sbjct 2563153 TTGACGAAGTCGGCGAGGTTGCCCTTGTAATGCACCAGCTTC---TTCTGTTCATAGTG- 2563098 Query 333786 ATA-ATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGA 333844 ||| || |||||| || ||||||||||| | |||||||| || || |||| | | Sbjct 2563097 ATAGATGTCGGTGCATACGGCGTCGAGGAAGGCCGAGTCGTGAGAAACGATCAGCGAGGT 2563038 Query 333845 AACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATG 333904 | | | || ||| | ||||||| || ||| | || || | || |||||| Sbjct 2563037 GATTTGCGTATGGTCGTGAAGGTATTGTTGCAACCATTTGACATTGGCTACGTCAAGATG 2562978 Query 333905 GTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGC 333964 ||||||||||||||||| | || | | ||| || ||||| || ||||| | ||| Sbjct 2562977 ATTGGTCGGCTCGTCAAGCAAGAGCACATCGGCGCGCATCAGCATGGCTCGTGCCAAAGC 2562918 Query 333965 GAGTTTCATTTTCCACCCTCCTGAAAG 333991 | ||||| |||||||| || ||||| Sbjct 2562917 CAACTTCATCTTCCACCCACCAGAAAG 2562891 >seq3 Length=7540789 Score = 84.2 bits (92), Expect = 5e-11 Identities = 301/464 (65%), Gaps = 15/464 (3%) Strand=Plus/Minus Query 298085 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAG 298144 || || || ||||| |||| ||||||| ||||| || ||| | ||||| | Sbjct 2906303 ACAATTGGTGTGATAAACTCGACCAAGAACTTTGGAAGCCTGAGCAGACTGGGGAACTGG 2906244 Query 298145 CTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTC 298204 || || ||||| || | | ||| |||||| ||||||| |||| ||| ||| Sbjct 2906243 ACTTGCAAGAAGTTGATCAACAAACCCTTGATGTGACTTCCGTCGTGATCCTGGTCAGTC 2906184 Query 298205 ATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGA 298264 |||||||||| || || || || || ||||| |||| ||||| | || Sbjct 2906183 ATGATCATCAAGTGCCCATATCGGAGTCCATTGGTGTCGGTGTAGACTTTCTTGTGCTGT 2906124 Query 298265 AGGCCGA-GAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGATGCTTG--CCACG 298321 ||||| | ||| || || | ||| || || ||||||| ||| ||| | | | Sbjct 2906123 AGGCCTAGGAAGTTCTTGATGTTCTG-AATCTCGGCGTTCTT--TGAAATTTGATCAATG 2906067 Query 298322 GATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGA 298381 |||||||| |||||||| | ||||| ||||| || ||||| || ||| | || | Sbjct 2906066 GATGCATCTCGGACATTTAGCAGTTTGCCACGCAGTGGGAAGACACCAAACAGATCTGGT 2906007 Query 298382 CCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCT---GCGGAATCCCCCTCCGTCAGA 298438 ||||| || || | ||||| | || || | || || || || || || || ||| Sbjct 2906006 CCGACAACAGATCGACCTGCTAAGGCGAG---CCCTTTGGCAGAGTCTCCTTCGGTTAGA 2905950 Query 298439 ATGAGAGTGCACATTTTGCTGTTATTCGTTCCAGCCCATGTAGCATCGTTGAGTTTGGGA 298498 || | ||||||| | | | | | || |||||| | |||||| | || ||||| Sbjct 2905949 ATCAAAGTGCACTTATGACCCTCTCTTGTGCCAGCCTTGTTGGCATCGGTAAGCTTGGGG 2905890 Query 298499 ATTCCAGTCACTCGGATCTTCTTGGTACCGTCGGTCTTCTTCAG 298542 | ||||| || || |||| ||||||| | |||||| || Sbjct 2905889 TT---AGTCATGCGACTCCGCTTGCTACCGTCCGACTTCTTGAG 2905849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879477165950