Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq6 136 9e-27
seq1 95.1 3e-14
seq3 84.2 5e-11
>seq6
Length=1840879
Score = 136 bits (150), Expect = 9e-27
Identities = 287/420 (68%), Gaps = 6/420 (1%)
Strand=Plus/Plus
Query 243318 CGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCG-CCATCTTTTGGCTGCGGAACAAAG 243376
||| || |||||| | || ||||| |||| ||| ||||||| |||||| || ||| |
Sbjct 490569 CGTCGAGGGTATTTTCTTCTCCGGCTCTTTC-GCGTCCATCTTCTGGCTGAAGAGCAAGG 490627
Query 243377 GTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACC 243436
|| ||||||| ||||| | || || || ||||| |||||||||||| | |||
Sbjct 490628 GTCTGATGCCCGGCCTGACCTTCTCCAATGAACTCATCTCGCGCGACGAGGGCATGCACA 490687
Query 243437 AACAGTTCGGTGAGCTTATGTATTCAA-AGCTCCAGAACAAGCTACCATTCGAAACGGTC 243495
| || | || || || || | | || ||||| | || | ||
Sbjct 490688 CCGACTTTGCCTGCCTGCTG-ATGCAGCATTTGAAGCACAAGGCAGACCCCGCGCTGATC 490746
Query 243496 AAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCA 243555
|||| |||||||| ||||| || | | ||| ||||||||| | ||| ||| ||||
Sbjct 490747 GAACACATCATCACCGAAGCCGTGGGCATCGAGAAGGAATTCCTGACCGATGCTCTTCCC 490806
Query 243556 TGCCGGCTTATTGGCA-TGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGA 243614
| |||| | |||| | ||||| | | || ||| |||||||||||| ||||| |||||
Sbjct 490807 -GTCGGCCTGTTGGGAATGAACGCCAAGCTGATGCAACAGTACATCGAGTTCGTCGCCGA 490865
Query 243615 CCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTT 243674
|||| | | |||| || || | || || |||||| || |||||||||| ||||
Sbjct 490866 CCGCCTGCTGCTCGCCCTGGGCAACAAGCGCGTCTACAACGCCCAGAACCCCTTCCCCTT 490925
Query 243675 TATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTA 243734
|||||| ||| ||||| || || || || |||||||| || |||||| | || ||
Sbjct 490926 CATGGAGAACATCTCGCTCGCGGGCAAGACCAATTTCTTCGAGAAACGTGTCGGCGACTA 490985
>seq1
Length=8684298
Score = 95.1 bits (104), Expect = 3e-14
Identities = 183/267 (69%), Gaps = 5/267 (2%)
Strand=Plus/Minus
Query 333726 TTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGG 333785
|| ||||| |||| || || |||||||| | | |||||| || |||| || ||
Sbjct 2563153 TTGACGAAGTCGGCGAGGTTGCCCTTGTAATGCACCAGCTTC---TTCTGTTCATAGTG- 2563098
Query 333786 ATA-ATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGA 333844
||| || |||||| || ||||||||||| | |||||||| || || |||| | |
Sbjct 2563097 ATAGATGTCGGTGCATACGGCGTCGAGGAAGGCCGAGTCGTGAGAAACGATCAGCGAGGT 2563038
Query 333845 AACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATG 333904
| | | || ||| | ||||||| || ||| | || || | || ||||||
Sbjct 2563037 GATTTGCGTATGGTCGTGAAGGTATTGTTGCAACCATTTGACATTGGCTACGTCAAGATG 2562978
Query 333905 GTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGC 333964
||||||||||||||||| | || | | ||| || ||||| || ||||| | |||
Sbjct 2562977 ATTGGTCGGCTCGTCAAGCAAGAGCACATCGGCGCGCATCAGCATGGCTCGTGCCAAAGC 2562918
Query 333965 GAGTTTCATTTTCCACCCTCCTGAAAG 333991
| ||||| |||||||| || |||||
Sbjct 2562917 CAACTTCATCTTCCACCCACCAGAAAG 2562891
>seq3
Length=7540789
Score = 84.2 bits (92), Expect = 5e-11
Identities = 301/464 (65%), Gaps = 15/464 (3%)
Strand=Plus/Minus
Query 298085 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAG 298144
|| || || ||||| |||| ||||||| ||||| || ||| | ||||| |
Sbjct 2906303 ACAATTGGTGTGATAAACTCGACCAAGAACTTTGGAAGCCTGAGCAGACTGGGGAACTGG 2906244
Query 298145 CTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTC 298204
|| || ||||| || | | ||| |||||| ||||||| |||| ||| |||
Sbjct 2906243 ACTTGCAAGAAGTTGATCAACAAACCCTTGATGTGACTTCCGTCGTGATCCTGGTCAGTC 2906184
Query 298205 ATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGA 298264
|||||||||| || || || || || ||||| |||| ||||| | ||
Sbjct 2906183 ATGATCATCAAGTGCCCATATCGGAGTCCATTGGTGTCGGTGTAGACTTTCTTGTGCTGT 2906124
Query 298265 AGGCCGA-GAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGATGCTTG--CCACG 298321
||||| | ||| || || | ||| || || ||||||| ||| ||| | | |
Sbjct 2906123 AGGCCTAGGAAGTTCTTGATGTTCTG-AATCTCGGCGTTCTT--TGAAATTTGATCAATG 2906067
Query 298322 GATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGA 298381
|||||||| |||||||| | ||||| ||||| || ||||| || ||| | || |
Sbjct 2906066 GATGCATCTCGGACATTTAGCAGTTTGCCACGCAGTGGGAAGACACCAAACAGATCTGGT 2906007
Query 298382 CCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCT---GCGGAATCCCCCTCCGTCAGA 298438
||||| || || | ||||| | || || | || || || || || || || |||
Sbjct 2906006 CCGACAACAGATCGACCTGCTAAGGCGAG---CCCTTTGGCAGAGTCTCCTTCGGTTAGA 2905950
Query 298439 ATGAGAGTGCACATTTTGCTGTTATTCGTTCCAGCCCATGTAGCATCGTTGAGTTTGGGA 298498
|| | ||||||| | | | | | || |||||| | |||||| | || |||||
Sbjct 2905949 ATCAAAGTGCACTTATGACCCTCTCTTGTGCCAGCCTTGTTGGCATCGGTAAGCTTGGGG 2905890
Query 298499 ATTCCAGTCACTCGGATCTTCTTGGTACCGTCGGTCTTCTTCAG 298542
| ||||| || || |||| ||||||| | |||||| ||
Sbjct 2905889 TT---AGTCATGCGACTCCGCTTGCTACCGTCCGACTTCTTGAG 2905849
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102879477165950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |