Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq4 118 1e-21 >seq4 Length=4536433 Score = 118 bits (130), Expect = 1e-21 Identities = 153/206 (74%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 42005 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 42064 |||||| ||| || || || || |||||||| || || || |||| || || || Sbjct 671464 ATGCAAGGTGGATTCTTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCGTCTTCAAGTTG 671523 Query 42065 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 ||| || ||||| || || ||||||||||||| || | || |||||||| ||| | | Sbjct 671524 CTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCT-TGAATCT 671582 Query 42125 TTG-TTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCC 42182 | | ||||| ||| | | | || ||||||||||| || |||| ||| ||||| ||||| Sbjct 671583 TGGATTTGA-CGTTGTCGATGGTATCGCTCGATTCGACCTCGAGCGTAATGGTCTTGCCG 671641 Query 42183 GTTAGCGTCTTTACAAAGATTTGCAT 42208 || || ||||| || ||||||||||| Sbjct 671642 GTAAGAGTCTTGACGAAGATTTGCAT 671667 Score = 105 bits (116), Expect = 7e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 |||| ||| | ||| ||||| || || ||||| || | ||||| || |||| || Sbjct 671231 ACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCTTCG 671290 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 || ||||| || ||||| || | ||| || ||||| | ||| | | ||||||||| | Sbjct 671291 AGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGGGATACCCTCCTTGTCTTGG 671350 Query 42120 ATTTTTTGTTTGAGCGTCGCCACC-GTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 || || ||| | ||| | || ||||| |||||| ||||| | ||||||||||| Sbjct 671351 ATCTTGGATTTCA-CGTTGTCAATAGTGTCTGACGATTCTACATCCAGGGTGATGGTTTT 671409 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || || ||||| || ||||||||||| Sbjct 671410 GCCGGTGAGAGTCTTGACGAAGATTTGCAT 671439 Score = 98.7 bits (108), Expect = 1e-15 Identities = 154/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055 || |||||| || | ||||||||||| ||||| ||||| |||| ||||| || | || Sbjct 670999 CAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGATAGAGTGCGGCCATC 671058 Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 || | ||||| || || || || | |||||| ||||| | || | || |||||||| Sbjct 671059 CTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTC 671118 Query 42116 CATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATG 42173 | ||| | || | |||| ||| | | | ||||| || ||||| || | ||||| Sbjct 671119 C-TGAATCTTCGACTTGA-CGTTGTCAATGGTGTCCGAGGACTCCACTTCTAAAGTGATC 671176 Query 42174 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || || || ||||| |||||||| ||||| Sbjct 671177 GTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211 Score = 98.7 bits (108), Expect = 1e-15 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 |||||||| || ||||| || || || || |||| || || ||||| || ||||| Sbjct 671705 TCCTTTTGGATGTTGTAGTCGCTCAAGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCGAAG 671764 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || ||||||||||||| || | || ||||||||| ||| || ||||| | Sbjct 671765 ATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGGATCTTGGATTTGACATTG 671824 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184 | | |||||||||||||| || |||| ||||||||| || || || Sbjct 671825 TCAATGGTGTCGCTCGATTCGACCTCGAGCGTGATGGTCTTTCCGGT 671871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212548764080