Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq4 134 1e-26 seq2 82.4 8e-11 >seq4 Length=4536433 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||| || | || || || ||||| | || |||||||| || ||||||||||| Sbjct 671441 CCGCCACGGAGTCGGAGGACGAGATGCAAGGTGGATTCTTTCTGGATGTTGTAATCGCTC 671500 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| |||||||||| ||||| ||||| | || || |||||||||||||||||| Sbjct 671501 AAGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGA 671560 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || ||||| || ||||| || || || || || | ||||| | | || || Sbjct 671561 ATGCCTTCCTTGTCTTGAATCTTGGATTTGACGTTGTCGATGGTATCGCTCGATTCGACC 671620 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||||||| | ||| || ||||| |||||||| Sbjct 671621 TCGAGCGTAATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 671667 Score = 96.9 bits (106), Expect = 3e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| ||||| |||||||| || | |||||| |||||||||| ||||| ||| Sbjct 671699 GTAGATTCCTTTTGGATGTTGTAGTCGCTCAAGGTGCGGCCGTCTTCAAGTTGCTTTCCG 671758 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359 || | || || |||||||||||||||||||| ||||| || || || || || Sbjct 671759 GCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGGATCTT 671811 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | ||| ||||| | || | || || || ||||||||||| || | Sbjct 670984 ACCACCGCGAAGTCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGA 671043 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | || || | |||||||||||| | || | ||||| ||||| || || Sbjct 671044 TAGAGTGCGGCCATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGG 671103 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || || || || || ||| || || | || || || ||||| Sbjct 671104 AATGCCTTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCAC 671163 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| ||| | ||||| || |||| ||| || || || || ||||| Sbjct 671164 TTCTAAAGTGATCGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211 >seq2 Length=8083196 Score = 82.4 bits (90), Expect = 8e-11 Identities = 128/181 (71%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315 ||||| |||||||| || | ||||| | || || || ||||||||||| | || Sbjct 5300564 TTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGATC 5300505 Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375 || ||||||||||| || || |||||||| || ||||| || || ||| ||| || Sbjct 5300504 AGGCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTAACATTGTCG 5300445 Query 64376 ACTGTATCACCGGCG--TCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433 | |||| ||| || || || || | || | ||||||||| |||| || || |||| Sbjct 5300444 ATCGTAT--CCGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 5300387 Query 64434 A 64434 | Sbjct 5300386 A 5300386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644568914280