Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq6 141 9e-29
seq4 109 5e-19
seq2 96.9 3e-15
>seq6
Length=1840879
Score = 141 bits (156), Expect = 9e-29
Identities = 343/514 (67%), Gaps = 13/514 (3%)
Strand=Plus/Plus
Query 52329 CCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG---CC 52385
|| ||| | ||||| || || | |||||| ||||||||||| | |||| | ||
Sbjct 490480 CCCTGCATCCGCAAGAAAGCCGATTGGGCATTGAAGTGGATCTCG---GACAAGGAGTCC 490536
Query 52386 ACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGC 52445
| | ||| | || | ||||| |||||| |||||||| | || || ||||||
Sbjct 490537 AGCTTCGCCCAACGACTCGTGGCGTTCGCCGCCGTCGAGGGTATTTTCTTCTCCGGCTCT 490596
Query 52446 TTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAAC 52505
|| || ||||||| | | || | || || | |||||||||||||| ||| |||
Sbjct 490597 TTCGCGTCCATCTTCTGGCTGAAGAGCAAGGGTCTGATGCCCGGCCTGACCTTCTCCAAT 490656
Query 52506 GAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT-CTACTACAAGAC 52564
|| | || ||||||||||| || ||||||| |||||||| ||||| || | ||
Sbjct 490657 GAACTCATCTCGCGCGACGAGGGCATGCACACCGACTTTGCCTGCCTGCTGATGCA---- 490712
Query 52565 GCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGC 52624
|| ||| | || || | | |||| ||| ||| || || ||||
Sbjct 490713 GCATTTGAAGCACAAGGCAGACCCCGCGCTGATCGAACACATCATCACCGAAGCCGTGGG 490772
Query 52625 TATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCA 52684
||||| ||||| || | || | || || || |||| ||| |||| |||||||| |
Sbjct 490773 CATCGAGAAGGAATTCCTGACCGATGCTCTTCCCGTCGGCCTGTTGGGAATGAACGCCAA 490832
Query 52685 GTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCC 52744
| ||| ||||||||||||| || || || || ||| || | | | ||||| |
Sbjct 490833 GCTGATGCAACAGTACATCGAGTTCGTCGCCGACCGCCTGCTGCT-CGCCCTGGGCAACA 490891
Query 52745 AAAG-TACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCA 52803
| | || |||||| | || || || || ||| | ||||| ||||| | |||||
Sbjct 490892 AGCGCGTCTACAACGCCCAGAACCCCTTCCCCTTCATGGAGAACATCTCGCTCGCGGGCA 490951
Query 52804 AGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
||||||| || |||||||| || |||||||| ||
Sbjct 490952 AGACCAATTTCTTCGAGAAACGTGTCGGCGACTA 490985
>seq4
Length=4536433
Score = 109 bits (120), Expect = 5e-19
Identities = 139/189 (74%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | ||| || |||| | || |||||||| |||||||||||||||
Sbjct 671669 CCACCACGGAGACGGAGAACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTC 671728
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||| || ||||| || |||| |||| || ||||| ||||| |||||
Sbjct 671729 AAGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGA 671788
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||| ||||| ||| || ||| | |||| || | ||||||| |||| || ||
Sbjct 671789 ATGCCTTCCTTGTCCTGGATCTTGGATTTGACATTG-TCAATGGTGTCGCTCGATTCGAC 671847
Query 138567 CTCGACCGT 138575
||||| |||
Sbjct 671848 CTCGAGCGT 671856
Score = 105 bits (116), Expect = 7e-18
Identities = 142/194 (73%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| |||||||||||||| | ||| || ||||| | ||| || |||| | |
Sbjct 671020 CTCCTTCTGAATGTTGTAGTCAGATAGAGTGCGGCCATCCTCCAATTGCTTGCCGGCAAA 671079
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540
||| | ||||||||||| || || || ||||| ||||| ||| | || | || | |
Sbjct 671080 GATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTC-CTGAATCTTCGACTTGACGT 671138
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
|| || | |||||| | |||||||| || | || | ||| || ||||||||||| ||
Sbjct 671139 TG-TCAATGGTGTCCGAGGACTCCACTTCTAAAGTGATCGTCTTTCCAGTCAGAGTCTTG 671197
Query 138601 ACAAAAATCTGCAT 138614
||||| ||||||||
Sbjct 671198 ACAAAGATCTGCAT 671211
>seq2
Length=8083196
Score = 96.9 bits (106), Expect = 3e-15
Identities = 132/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
||||||| |||||||||||||||| ||| || ||||||||||| || |||| |||
Sbjct 5300566 CCTTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGA 5300507
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543
| || ||||| |||||||| || || ||||| ||||| ||| || || | ||||
Sbjct 5300506 TCAGGCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTAACATTG- 5300448
Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603
|| | || || | |||||| ||||| | || | || || || ||||| || || ||
Sbjct 5300447 TCGATCGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACG 5300388
Query 138604 AA 138605
||
Sbjct 5300387 AA 5300386
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262170478640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |