Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq6 188 7e-43 seq4 111 1e-19 >seq6 Length=1840879 Score = 188 bits (208), Expect = 7e-43 Identities = 416/614 (68%), Gaps = 31/614 (5%) Strand=Plus/Plus Query 46979 CATCCACACGGAAATGTACAACCTTCTCATACACGCCCTCATCAAAGACG---AAGAGAA 47035 ||||||| |||| ||||||| ||| | || || | |||||| ||| || |||| Sbjct 490389 CATCCACTCGGAGATGTACAGTCTTTTGATTGACACGTACATCAACGACCCCAAACAGAA 490448 Query 47036 GCAAGCGACGCTTTTGAACGGTTTCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTG 47095 ||| | || || | | | || | || |||||| | |||| || ||||| || Sbjct 490449 GCA---GTATCTCTTTGATGCCATTGACACGATTCCCTGCATCCGCAAGAAAGCCGATTG 490505 Query 47096 GGCCATGAAGTACATT---GAAAACGAAAACGTCACTCTG-GCCGAACGTTTGATCGCTT 47151 ||| |||||| || || || || ||| || ||| |||| | | || | Sbjct 490506 GGCATTGAAGTGGATCTCGGACAAGGA----GTCCAGCTTCGCCCAACGACTCGTGGCGT 490561 Query 47152 TCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAA 47211 ||||| ||||||||| | |||||||| ||| || ||| | || || | |||| | Sbjct 490562 TCGCCGCCGTCGAGGGTATTTTCTTCTCCGGCTCTTTCGCGTCCATCTTCTGGCTGAAGA 490621 Query 47212 CCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCC 47271 ||| || | ||||||||||| || || ||| || || |||||| | ||||| ||| Sbjct 490622 GCAAGGGTCTGATGCCCGGCCTGACCTTCTCCAATGAACTCATCTCGCGCGACGAGGGCA 490681 Query 47272 TGCACACCAACTTTGCCTGTCT-CTACTACAACACTAGAGTCGATCAAAAGTTGGACGTG 47330 |||||||| |||||||||| || || | || || | || | || ||| ||| Sbjct 490682 TGCACACCGACTTTGCCTGCCTGCTGATGCAGCATTTGA----AGCACAAGGCAGAC--- 490734 Query 47331 CCCACCGTCAGCGA---CATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCC 47387 ||| | | | ||| ||| | |||||||||| | ||| |||| ||| || | || Sbjct 490735 CCCGCGCTGATCGAACACATCATCACCGAAGCCGTGGGCATCGAGAAGGAATTCCTGACC 490794 Query 47388 GAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAA 47447 || ||||| |||| | ||||||||||||| || ||||| | |||||||||| Sbjct 490795 GATGCTCTTCCCGTCGGCCTGTTGGGAATGAACGCCAAGCTGATGCAACAGTACATCGAG 490854 Query 47448 TTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGA---TTTACCACACCGAG 47504 || ||||||||||||||||| | || | | | | ||| | ||| || || || Sbjct 490855 TTCGTCGCCGACCGCCTGCT-GCTCGCCCTGGGCAAC--AAGCGCGTCTACAACGCCCAG 490911 Query 47505 AATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAG 47564 || || ||| || ||| | ||||| ||||||| |||||||||||| || |||||||| Sbjct 490912 AACCCCTTCCCCTTCATGGAGAACATCTCGCTCGCGGGCAAGACCAATTTCTTCGAGAAA 490971 Query 47565 CGCGTCGGCGAATA 47578 || |||||||| || Sbjct 490972 CGTGTCGGCGACTA 490985 >seq4 Length=4536433 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || || |||||| || | || ||| || ||||| ||||| || Sbjct 670985 CCACCGCGAAGTCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAT 671044 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || | || || || || ||||||||||||| || || || || Sbjct 671045 AGAGTGCGGCCATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGA 671104 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| ||||||||| || ||| ||||| |||| || | |||||||| ||| || Sbjct 671105 ATGCCTTCCTTGTCCTGAATCTTCGACTTGACGTTG-TCAATGGTGTCCGAGGACTCCAC 671163 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | ||| || || |||||||| || ||||| |||||||| Sbjct 671164 TTCTAAAGTGATCGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500580080880