Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq6 188 7e-43
seq4 111 1e-19
>seq6
Length=1840879
Score = 188 bits (208), Expect = 7e-43
Identities = 416/614 (68%), Gaps = 31/614 (5%)
Strand=Plus/Plus
Query 46979 CATCCACACGGAAATGTACAACCTTCTCATACACGCCCTCATCAAAGACG---AAGAGAA 47035
||||||| |||| ||||||| ||| | || || | |||||| ||| || ||||
Sbjct 490389 CATCCACTCGGAGATGTACAGTCTTTTGATTGACACGTACATCAACGACCCCAAACAGAA 490448
Query 47036 GCAAGCGACGCTTTTGAACGGTTTCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTG 47095
||| | || || | | | || | || |||||| | |||| || ||||| ||
Sbjct 490449 GCA---GTATCTCTTTGATGCCATTGACACGATTCCCTGCATCCGCAAGAAAGCCGATTG 490505
Query 47096 GGCCATGAAGTACATT---GAAAACGAAAACGTCACTCTG-GCCGAACGTTTGATCGCTT 47151
||| |||||| || || || || ||| || ||| |||| | | || |
Sbjct 490506 GGCATTGAAGTGGATCTCGGACAAGGA----GTCCAGCTTCGCCCAACGACTCGTGGCGT 490561
Query 47152 TCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAA 47211
||||| ||||||||| | |||||||| ||| || ||| | || || | |||| |
Sbjct 490562 TCGCCGCCGTCGAGGGTATTTTCTTCTCCGGCTCTTTCGCGTCCATCTTCTGGCTGAAGA 490621
Query 47212 CCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCC 47271
||| || | ||||||||||| || || ||| || || |||||| | ||||| |||
Sbjct 490622 GCAAGGGTCTGATGCCCGGCCTGACCTTCTCCAATGAACTCATCTCGCGCGACGAGGGCA 490681
Query 47272 TGCACACCAACTTTGCCTGTCT-CTACTACAACACTAGAGTCGATCAAAAGTTGGACGTG 47330
|||||||| |||||||||| || || | || || | || | || ||| |||
Sbjct 490682 TGCACACCGACTTTGCCTGCCTGCTGATGCAGCATTTGA----AGCACAAGGCAGAC--- 490734
Query 47331 CCCACCGTCAGCGA---CATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCC 47387
||| | | | ||| ||| | |||||||||| | ||| |||| ||| || | ||
Sbjct 490735 CCCGCGCTGATCGAACACATCATCACCGAAGCCGTGGGCATCGAGAAGGAATTCCTGACC 490794
Query 47388 GAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAA 47447
|| ||||| |||| | ||||||||||||| || ||||| | ||||||||||
Sbjct 490795 GATGCTCTTCCCGTCGGCCTGTTGGGAATGAACGCCAAGCTGATGCAACAGTACATCGAG 490854
Query 47448 TTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGA---TTTACCACACCGAG 47504
|| ||||||||||||||||| | || | | | | ||| | ||| || || ||
Sbjct 490855 TTCGTCGCCGACCGCCTGCT-GCTCGCCCTGGGCAAC--AAGCGCGTCTACAACGCCCAG 490911
Query 47505 AATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAG 47564
|| || ||| || ||| | ||||| ||||||| |||||||||||| || ||||||||
Sbjct 490912 AACCCCTTCCCCTTCATGGAGAACATCTCGCTCGCGGGCAAGACCAATTTCTTCGAGAAA 490971
Query 47565 CGCGTCGGCGAATA 47578
|| |||||||| ||
Sbjct 490972 CGTGTCGGCGACTA 490985
>seq4
Length=4536433
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || || |||||| || | || ||| || ||||| ||||| ||
Sbjct 670985 CCACCGCGAAGTCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAT 671044
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || | || || || || ||||||||||||| || || || ||
Sbjct 671045 AGAGTGCGGCCATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGA 671104
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||| ||||||||| || ||| ||||| |||| || | |||||||| ||| ||
Sbjct 671105 ATGCCTTCCTTGTCCTGAATCTTCGACTTGACGTTG-TCAATGGTGTCCGAGGACTCCAC 671163
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| | || | ||| || || |||||||| || ||||| ||||||||
Sbjct 671164 TTCTAAAGTGATCGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500580080880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |