Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq4 125 6e-24
>seq4
Length=4536433
Score = 125 bits (138), Expect = 6e-24
Identities = 168/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | || ||||||| || ||||| || ||||| || ||||||
Sbjct 671438 ATGCCGCCACGGAGTCGGAGGACGAGATGCAAGGTGGATTCTTTCTGGATGTTGTAATCG 671497
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| | ||| || || | ||| ||||| ||| | |||| || |||||||| ||
Sbjct 671498 CTCAAGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGA 671557
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||||||||| || |||||||| || ||||| || | || | ||| ||| || ||
Sbjct 671558 GGAATGCCTTCCTTGTCTTGAATCTTGGATTTGA-CGTTGTCGATGGTATCGCTCGATTC 671616
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||| ||||| |||| || |||||||| ||||| || || || ||||||||
Sbjct 671617 GACCTCGAGCGTAATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 671667
Score = 100 bits (110), Expect = 3e-16
Identities = 118/157 (75%), Gaps = 2/157 (1%)
Strand=Plus/Plus
Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244
||| |||||||| || || || | |||||||| || ||||| || ||||||||||| ||
Sbjct 671056 ATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTT 671115
Query 45245 ATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303
|| ||||| || |||| || | || | |||||| || ||||| ||||| | ||| |
Sbjct 671116 GTCCTGAATCTTCGACTTGA-CGTTGTCAATGGTGTCCGAGGACTCCACTTCTAAAGTGA 671174
Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||| || || || ||||| || ||||| || |||||
Sbjct 671175 TCGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211
Score = 100 bits (110), Expect = 3e-16
Identities = 167/239 (70%), Gaps = 2/239 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || || | || ||||| || || |||||||| ||||| || || |||
Sbjct 671210 ATACCACCACGAAGTCTGAGTACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCG 671269
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| || || | ||| || |||||| | ||||||||||| ||||| ||
Sbjct 671270 GAAAGAGTTCGGCCGTCTTCGAGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGT 671329
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || || || || ||||| || || ||| | || | || | ||||| || || ||
Sbjct 671330 GGGATACCCTCCTTGTCTTGGATCTTGGATTTCA-CGTTGTCAATAGTGTCTGACGATTC 671388
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348
|| || || || | ||||||||||| ||||| || || || |||||||| ||| ||
Sbjct 671389 TACATCCAGGGTGATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCATGCCGCCAC 671447
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || |||||||||||||| || || ||||| | ||| || || | |||
Sbjct 671693 TGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTCAAGGTGCGGCCGTCTTCAAGTTGC 671752
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
||||| ||| | |||| || |||||||| || ||||||||||| || || || || ||
Sbjct 671753 TTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGGATCTTG 671812
Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
||||| || | ||||||| || ||||| ||||| || | || || |||||
Sbjct 671813 GATTTGACATTGTCAATGGTGTCGCTCGATTCGACCTCGAGCGTGATGGTCTTTCCGGT 671871
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452002990948520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |