Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2 129 9e-25 seq6 120 5e-22 >seq2 Length=8083196 Score = 129 bits (142), Expect = 9e-25 Identities = 415/634 (65%), Gaps = 10/634 (2%) Strand=Plus/Plus Query 203885 AGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGT 203944 || ||||||||||| ||||| |||||| ||| ||| ||| | |||||| || | | Sbjct 1632048 AGGTAGTACATGCCTGTCTTCAGGCCCATCTTCCAGCCGGCGAAGTGCATCGAGGTGATC 1632107 Query 203945 TTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGC 204004 |||| || | | || || | |||||||| || || ||| ||| || ||||| ||| Sbjct 1632108 TTGCCCATGGTTGGCTCCTTGAGATGAATGTTAAGGGATTGGGATTGATCAATGAA-GGC 1632166 Query 204005 GCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAA 204063 ||| ||||| |||||||| | || | ||| || || ||||| || ||||| | Sbjct 1632167 GCCACGATCCGCGGCCATTTGGAGTACGGTGCGTTGACTGATTTCCCAGACAGTCTTATA 1632226 Query 204064 CACGTCTCTGGTGTGTTGAGGCACATCTTCCCA-CGTCCTG-ATCGAGCCGTTGTCGGCC 204121 | | | || | | || | | || || | ||| || ||||| || ||||| Sbjct 1632227 GAGGGC-CTTGAG-GTCGGCGGGGATGTTGGGAACGTTTTGGATCGATCCACCATCGGCG 1632284 Query 204122 ATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGG 204181 || | | || || | | || ||| | |||| || || |||| || || Sbjct 1632285 ATGATGCGGTTCTTCATGTTGTCTGACCAGAGACCCATGTCGACAAGATCCCTCAGGAGC 1632344 Query 204182 TGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTG 204241 ||||||| | || || || || | ||| || | |||| | | | ||| |||| Sbjct 1632345 CATGGGTTGACAACTTGGAACTCGCCTGCCAGGACACGGCGGGAGTATATGTTCGAGGTG 1632404 Query 204242 AATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGA 204301 | |||||||| ||||||||||| | ||||||| ||| || || ||||||||| Sbjct 1632405 TAGGGTTCGAAGCATTCGTTGTTGCCCAGGATCTGAGAAGTGGACGCAGTAGGCATGGGA 1632464 Query 204302 GCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAG 204361 || | ||| ||||||||||| ||||| | || | | | ||| || ||| |||| Sbjct 1632465 GCGACGAGGAGGGAGTTGCGGACACCATGCTTAGCAATCTCGGCCTTTAGCGAGTCCCAG 1632524 Query 204362 TCGTGCATCGCACT--GGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGA 204419 || ||| | || ||| | ||| |||||| || |||| | ||| ||||| || Sbjct 1632525 TC--CCATAGGTCTGAGGGAGTGACGTTCCACATATCATACTGGAGGATACCTTGGGAGA 1632582 Query 204420 CTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGG 204479 |||||||||| | ||| |||| |||||| || || | || || | |||||||||| Sbjct 1632583 CTGGGCTGCCTTCGTATGTCGAGTAAGGCCCCTCTTCCTGCGCGAGTTCACACGAGGCGG 1632642 Query 204480 CCATGGCGTGATAGTACATGGTCTCAAAGATCTG 204513 | ||| | ||| ||||| || ||||| || Sbjct 1632643 TGAGGGCAGCGTGGTAGATGGTTTCGAAGATTTG 1632676 >seq6 Length=1840879 Score = 120 bits (132), Expect = 5e-22 Identities = 293/438 (67%), Gaps = 17/438 (4%) Strand=Plus/Minus Query 159640 CGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCC 159699 |||||| || ||||||| || |||||||||||| | | || || |||||||| Sbjct 490978 CGACACGTT--TCTCGAAGAAATTGGTCTTGCCCGCGAGCGAGATGTTCTCCATGAAGGG 490921 Query 159700 GAATGGGTTCTTCACGTGATAG---CGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTC 159756 ||| ||||||| ||| ||| ||||| || || || ||||| | ||| Sbjct 490920 GAAGGGGTTCTGGGCGTTGTAGACGCGCTTGTTG---CCCAGGGCGAGCAGCAGGCGGTC 490864 Query 159757 TGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGG 159816 || || || |||||||| |||| ||| ||| || |||| ||| | ||||| Sbjct 490863 GGCGACGAACTCGATGTACTGTTGCATCAGCTTGGCGTTCATTCCCAACAGGCCGACGGG 490804 Query 159817 GAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGAC 159876 || || || | ||| || |||||||| || | || |||||||| | || || || Sbjct 490803 AAGAGCATCGGTCAGGAATTCCTTCTCGATGCCCACGGCTTCGGTGATGATGTGTTCGAT 490744 Query 159877 ACGTTCGTACCCCGGCTTGCCCA--AAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCG 159934 | || | | |||| | ||||| || | ||| ||||| ||||||||| Sbjct 490743 CAGCGCGGGGTCTGCCTTGTGCTTCAAATG-----CTGCATCAGCAGGCAGGCAAAGTCG 490689 Query 159935 CAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATC 159994 ||||| |||||||| || ||||||| || ||||| | | | ||||| ||||| | Sbjct 490688 GTGTGCATGCCCTCGTCGCGCGAGATGAGTTCATTGGAGAAGGTCAGGCCGGGCATCAGA 490629 Query 159995 CCACGCGGT-TTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCAC 160053 || | | | || ||||| || |||| ||| |||| ||| || || || ||||| || Sbjct 490628 CC-CTTGCTCTTCAGCCAGAAGATGGACGCGAAAGAGCCGGAGAAGAAAATACCCTCGAC 490570 Query 160054 GGCCGCAAACGCCACGAG 160071 ||| || ||||||||||| Sbjct 490569 GGCGGCGAACGCCACGAG 490552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154832240720