Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq2 129 9e-25
seq6 120 5e-22
>seq2
Length=8083196
Score = 129 bits (142), Expect = 9e-25
Identities = 415/634 (65%), Gaps = 10/634 (2%)
Strand=Plus/Plus
Query 203885 AGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGT 203944
|| ||||||||||| ||||| |||||| ||| ||| ||| | |||||| || | |
Sbjct 1632048 AGGTAGTACATGCCTGTCTTCAGGCCCATCTTCCAGCCGGCGAAGTGCATCGAGGTGATC 1632107
Query 203945 TTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGC 204004
|||| || | | || || | |||||||| || || ||| ||| || ||||| |||
Sbjct 1632108 TTGCCCATGGTTGGCTCCTTGAGATGAATGTTAAGGGATTGGGATTGATCAATGAA-GGC 1632166
Query 204005 GCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAA 204063
||| ||||| |||||||| | || | ||| || || ||||| || ||||| |
Sbjct 1632167 GCCACGATCCGCGGCCATTTGGAGTACGGTGCGTTGACTGATTTCCCAGACAGTCTTATA 1632226
Query 204064 CACGTCTCTGGTGTGTTGAGGCACATCTTCCCA-CGTCCTG-ATCGAGCCGTTGTCGGCC 204121
| | | || | | || | | || || | ||| || ||||| || |||||
Sbjct 1632227 GAGGGC-CTTGAG-GTCGGCGGGGATGTTGGGAACGTTTTGGATCGATCCACCATCGGCG 1632284
Query 204122 ATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGG 204181
|| | | || || | | || ||| | |||| || || |||| || ||
Sbjct 1632285 ATGATGCGGTTCTTCATGTTGTCTGACCAGAGACCCATGTCGACAAGATCCCTCAGGAGC 1632344
Query 204182 TGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTG 204241
||||||| | || || || || | ||| || | |||| | | | ||| ||||
Sbjct 1632345 CATGGGTTGACAACTTGGAACTCGCCTGCCAGGACACGGCGGGAGTATATGTTCGAGGTG 1632404
Query 204242 AATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGA 204301
| |||||||| ||||||||||| | ||||||| ||| || || |||||||||
Sbjct 1632405 TAGGGTTCGAAGCATTCGTTGTTGCCCAGGATCTGAGAAGTGGACGCAGTAGGCATGGGA 1632464
Query 204302 GCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAG 204361
|| | ||| ||||||||||| ||||| | || | | | ||| || ||| ||||
Sbjct 1632465 GCGACGAGGAGGGAGTTGCGGACACCATGCTTAGCAATCTCGGCCTTTAGCGAGTCCCAG 1632524
Query 204362 TCGTGCATCGCACT--GGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGA 204419
|| ||| | || ||| | ||| |||||| || |||| | ||| ||||| ||
Sbjct 1632525 TC--CCATAGGTCTGAGGGAGTGACGTTCCACATATCATACTGGAGGATACCTTGGGAGA 1632582
Query 204420 CTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGG 204479
|||||||||| | ||| |||| |||||| || || | || || | ||||||||||
Sbjct 1632583 CTGGGCTGCCTTCGTATGTCGAGTAAGGCCCCTCTTCCTGCGCGAGTTCACACGAGGCGG 1632642
Query 204480 CCATGGCGTGATAGTACATGGTCTCAAAGATCTG 204513
| ||| | ||| ||||| || ||||| ||
Sbjct 1632643 TGAGGGCAGCGTGGTAGATGGTTTCGAAGATTTG 1632676
>seq6
Length=1840879
Score = 120 bits (132), Expect = 5e-22
Identities = 293/438 (67%), Gaps = 17/438 (4%)
Strand=Plus/Minus
Query 159640 CGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCC 159699
|||||| || ||||||| || |||||||||||| | | || || ||||||||
Sbjct 490978 CGACACGTT--TCTCGAAGAAATTGGTCTTGCCCGCGAGCGAGATGTTCTCCATGAAGGG 490921
Query 159700 GAATGGGTTCTTCACGTGATAG---CGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTC 159756
||| ||||||| ||| ||| ||||| || || || ||||| | |||
Sbjct 490920 GAAGGGGTTCTGGGCGTTGTAGACGCGCTTGTTG---CCCAGGGCGAGCAGCAGGCGGTC 490864
Query 159757 TGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGG 159816
|| || || |||||||| |||| ||| ||| || |||| ||| | |||||
Sbjct 490863 GGCGACGAACTCGATGTACTGTTGCATCAGCTTGGCGTTCATTCCCAACAGGCCGACGGG 490804
Query 159817 GAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGAC 159876
|| || || | ||| || |||||||| || | || |||||||| | || || ||
Sbjct 490803 AAGAGCATCGGTCAGGAATTCCTTCTCGATGCCCACGGCTTCGGTGATGATGTGTTCGAT 490744
Query 159877 ACGTTCGTACCCCGGCTTGCCCA--AAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCG 159934
| || | | |||| | ||||| || | ||| ||||| |||||||||
Sbjct 490743 CAGCGCGGGGTCTGCCTTGTGCTTCAAATG-----CTGCATCAGCAGGCAGGCAAAGTCG 490689
Query 159935 CAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATC 159994
||||| |||||||| || ||||||| || ||||| | | | ||||| ||||| |
Sbjct 490688 GTGTGCATGCCCTCGTCGCGCGAGATGAGTTCATTGGAGAAGGTCAGGCCGGGCATCAGA 490629
Query 159995 CCACGCGGT-TTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCAC 160053
|| | | | || ||||| || |||| ||| |||| ||| || || || ||||| ||
Sbjct 490628 CC-CTTGCTCTTCAGCCAGAAGATGGACGCGAAAGAGCCGGAGAAGAAAATACCCTCGAC 490570
Query 160054 GGCCGCAAACGCCACGAG 160071
||| || |||||||||||
Sbjct 490569 GGCGGCGAACGCCACGAG 490552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154832240720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |