Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq4 127 5e-24
seq3 102 2e-16
seq2 96.9 8e-15
>seq4
Length=4536433
Score = 127 bits (140), Expect = 5e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||||||||| || | |||||| || |||||| || | ||||||||||| | |||
Sbjct 670991 CGAAGTCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGATAGAGTG 671050
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| |||| ||||| ||||| ||||| | ||||| ||||| || ||| |||
Sbjct 671051 CGGCCATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCT 671110
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| ||| ||| || | |||||| | | || || || ||
Sbjct 671111 TCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCACTTCTAAA 671170
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| || || ||||| || ||||| || ||
Sbjct 671171 GTGATCGTCTTTCCAGTCAGAGTCTTGACAAAGATCTG 671208
Score = 118 bits (130), Expect = 2e-21
Identities = 140/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| ||||| || |||||||||| ||||||||| ||| || | || |||
Sbjct 671684 AGAACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTCAAGGTGCGGCCGTCT 671743
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| || ||||||||||||||||| || ||||||||||| ||| ||| ||||| |||
Sbjct 671744 TCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCC 671803
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| || || || | |||||| | | ||| || || | |||||| |||
Sbjct 671804 TGGATCTTGGATTTGACATTGTCAATGGTGTCGCTCGATTCGACCTCGAGCGTGATGGTC 671863
Query 199598 TTACCCGTGA 199607
|| || ||||
Sbjct 671864 TTTCCGGTGA 671873
Score = 114 bits (126), Expect = 3e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|||||||| || || || || ||||| || ||||| |||| ||||||||| | | |||
Sbjct 671219 CGAAGTCTGAGTACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTT 671278
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || ||||| || ||||| || |||||||| | || || ||||| || || ||
Sbjct 671279 CGGCCGTCTTCGAGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGGGATACCC 671338
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || || ||||| |||||| || | ||||||| | |||||||||||
Sbjct 671339 TCCTTGTCTTGGATCTTGGATTTCACGTTGTCAATAGTGTCTGACGATTCTACATCCAGG 671398
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| || || || |||||||| || || || |||||
Sbjct 671399 GTGATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTG 671436
Score = 114 bits (126), Expect = 3e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| |||| ||||| || || | || || || || |||| |||||| || ||| ||
Sbjct 671447 CGGAGTCGGAGGACGAGATGCAAGGTGGATTCTTTCTGGATGTTGTAATCGCTCAAGGTG 671506
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || ||||| || ||||||||||||||||| || ||||||||||| ||| ||| |||
Sbjct 671507 CGGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCT 671566
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || |||||||| || ||| |||| ||| || | | ||| || || | |
Sbjct 671567 TCCTTGTCTTGAATCTTGGATTTGACGTTGTCGATGGTATCGCTCGATTCGACCTCGAGC 671626
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || ||||| || || || |||||
Sbjct 671627 GTAATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTG 671664
>seq3
Length=7540789
Score = 102 bits (112), Expect = 2e-16
Identities = 83/101 (82%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| |||||||||||||| |||| ||||||||| | | ||| | || |||
Sbjct 3360412 AGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCT 3360353
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
|| || ||||| |||||||||||||| || |||||||| ||
Sbjct 3360352 TCGAGTTGCTTGCCGGCGAAGATGAGGCGTTGCTGGTCTGG 3360312
>seq2
Length=8083196
Score = 96.9 bits (106), Expect = 8e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
||||||||| ||||||||| |||||| | ||||| || || ||||| ||||||||||
Sbjct 5300566 CCTTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGA 5300507
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559
| || |||||||||||||| |||||||| || || ||||| ||| || |
Sbjct 5300506 TCAGGCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTAACATTGT 5300447
Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619
||| || || | | || || || | ||||| ||||| ||||| || || || || |
Sbjct 5300446 CGATCGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 5300387
Query 199620 A 199620
|
Sbjct 5300386 A 5300386
Score = 91.5 bits (100), Expect = 3e-13
Identities = 169/248 (68%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 167768 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 167827
|| ||||| || | ||| | ||| | ||| ||| | ||||| | | | |||| | |
Sbjct 1633038 GCATCCTTATAAAGCATGTATGGCGTCCCAGTCTCGGTTTGAGACTCGAGAATGGCATAC 1633097
Query 167828 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 167887
|| || | ||||| || | ||| || ||| |||||| || ||||| |||| |||
Sbjct 1633098 CACAGCTTCTGGGCCTTGATGGTCTGTCGACCTCGTCCTTCCTTCTCGTACTTCTCGTAG 1633157
Query 167888 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 167947
|| | ||||| || | ||||| | || ||||||| || || || | || || |||
Sbjct 1633158 AGTGCCTCGAACTCGTCACCGTAGACATCAGCAAGACCAGGGGCCTCGTGTGGGCAGAAG 1633217
Query 167948 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 168007
|| |||| | | || |||| || | || ||||||||| || | ||||||| |||
Sbjct 1633218 AGTGTCCAGTCTTGATTCTTCTCAACACGCTGCATGAAGAGATCCGGGGTCCAAAGGGCG 1633277
Query 168008 TAGAACAA 168015
||||||||
Sbjct 1633278 TAGAACAA 1633285
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921041117479
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |