Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq4 132 5e-26 seq2 107 2e-18 seq3 102 9e-17 >seq4 Length=4536433 Score = 132 bits (146), Expect = 5e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||||||| | || ||||| ||||| ||||||||||| ||||| || |||| ||| Sbjct 671231 ACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCTTCG 671290 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || |||||||| ||||| ||||| || || ||||| | || | | ||||||||| | Sbjct 671291 AGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGGGATACCCTCCTTGTCTTGG 671350 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| || | ||| | | | ||||| |||||| ||||||| ||||||||||| Sbjct 671351 ATCTTGGATTTCA-CGTTGTCAATAGTGTCTGACGATTCTACATCCAGGGTGATGGTTTT 671409 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || || || || ||||||||||| Sbjct 671410 GCCGGTGAGAGTCTTGACGAAGATTTGCAT 671439 Score = 122 bits (134), Expect = 1e-22 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440 || ||||| || | || |||||||| || || |||||||| ||||||||||| | || Sbjct 670999 CAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGATAGAGTGCGGCCATC 671058 Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 || | ||||||||||| || ||||| ||||| ||||| | || | || |||||||| Sbjct 671059 CTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTC 671118 Query 46501 CATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGG 46559 | |||||| ||||| ||| | | | ||||| || ||||| || | ||||| | Sbjct 671119 CTGAATCTTCGACTTGA-CGTTGTCAATGGTGTCCGAGGACTCCACTTCTAAAGTGATCG 671177 Query 46560 TTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || ||||| || || |||||||| ||||| Sbjct 671178 TCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || |||||||| || || || ||||| ||||| ||| | ||||| |||| || Sbjct 671459 ACGAGATGCAAGGTGGATTCTTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCGTCTTCA 671518 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || ||||| |||||||| |||| |||||||||||||| || | || |||||||| Sbjct 671519 AGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCTTGA 671578 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| |||| ||| | | | || ||||||||||| || || | ||| ||||| || Sbjct 671579 ATCTTGGATTTGA-CGTTGTCGATGGTATCGCTCGATTCGACCTCGAGCGTAATGGTCTT 671637 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || || || || ||||||||||| Sbjct 671638 GCCGGTAAGAGTCTTGACGAAGATTTGCAT 671667 Score = 116 bits (128), Expect = 4e-21 Identities = 126/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| ||||||||| | ||||| |||| || || ||||| |||||||| Sbjct 671705 TCCTTTTGGATGTTGTAGTCGCTCAAGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCGAAG 671764 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| |||||||||||||| || | || ||||||||| |||||| |||| | Sbjct 671765 ATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGGATCTTGGATTTGACATTG 671824 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | |||||||||||||| || || | ||||||||| || || || Sbjct 671825 TCAATGGTGTCGCTCGATTCGACCTCGAGCGTGATGGTCTTTCCGGT 671871 >seq2 Length=8083196 Score = 107 bits (118), Expect = 2e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||||||||| ||||||||| | |||||| | || ||||| |||||||||||||| | Sbjct 5300566 CCTTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGA 5300507 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| |||||||||||| | || | | |||||||| |||||| ||| | | Sbjct 5300506 TCAGGCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTAACATTGT 5300447 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | ||| || ||| || || || | |||||||| ||||||||||| || || || | Sbjct 5300446 CGATCGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 5300387 Query 46584 AG 46585 || Sbjct 5300386 AG 5300385 >seq3 Length=7540789 Score = 102 bits (112), Expect = 9e-17 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 ||||| |||| || |||||| ||||| ||||||||||| ||||| || |||| ||| Sbjct 3360409 ACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCG 3360350 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 || |||||||||||||| || | ||| |||||||| | ||| | || |||||||| Sbjct 3360349 AGTTGCTTGCCGGCGAAGATGAGGCGTTGCTGGTCTGGCGGGATGCCTTCCTTGTC 3360294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238138577240