Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq4 132 5e-26
seq2 107 2e-18
seq3 102 9e-17
>seq4
Length=4536433
Score = 132 bits (146), Expect = 5e-26
Identities = 157/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||||||| | || ||||| ||||| ||||||||||| ||||| || |||| |||
Sbjct 671231 ACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCTTCG 671290
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|| |||||||| ||||| ||||| || || ||||| | || | | ||||||||| |
Sbjct 671291 AGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGGGATACCCTCCTTGTCTTGG 671350
Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
||||| || | ||| | | | ||||| |||||| ||||||| |||||||||||
Sbjct 671351 ATCTTGGATTTCA-CGTTGTCAATAGTGTCTGACGATTCTACATCCAGGGTGATGGTTTT 671409
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || || || || || |||||||||||
Sbjct 671410 GCCGGTGAGAGTCTTGACGAAGATTTGCAT 671439
Score = 122 bits (134), Expect = 1e-22
Identities = 157/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440
|| ||||| || | || |||||||| || || |||||||| ||||||||||| | ||
Sbjct 670999 CAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGATAGAGTGCGGCCATC 671058
Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|| | ||||||||||| || ||||| ||||| ||||| | || | || ||||||||
Sbjct 671059 CTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTC 671118
Query 46501 CATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGG 46559
| |||||| ||||| ||| | | | ||||| || ||||| || | ||||| |
Sbjct 671119 CTGAATCTTCGACTTGA-CGTTGTCAATGGTGTCCGAGGACTCCACTTCTAAAGTGATCG 671177
Query 46560 TTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| || || ||||| || || |||||||| |||||
Sbjct 671178 TCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211
Score = 120 bits (132), Expect = 3e-22
Identities = 154/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| |||||||| || || || ||||| ||||| ||| | ||||| |||| ||
Sbjct 671459 ACGAGATGCAAGGTGGATTCTTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCGTCTTCA 671518
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|| ||||| |||||||| |||| |||||||||||||| || | || ||||||||
Sbjct 671519 AGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCTTGA 671578
Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
||||| |||| ||| | | | || ||||||||||| || || | ||| ||||| ||
Sbjct 671579 ATCTTGGATTTGA-CGTTGTCGATGGTATCGCTCGATTCGACCTCGAGCGTAATGGTCTT 671637
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || || || || || |||||||||||
Sbjct 671638 GCCGGTAAGAGTCTTGACGAAGATTTGCAT 671667
Score = 116 bits (128), Expect = 4e-21
Identities = 126/167 (75%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||||||||| ||||||||| | ||||| |||| || || ||||| ||||||||
Sbjct 671705 TCCTTTTGGATGTTGTAGTCGCTCAAGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCGAAG 671764
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|||| |||||||||||||| || | || ||||||||| |||||| |||| |
Sbjct 671765 ATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGGATCTTGGATTTGACATTG 671824
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
| | |||||||||||||| || || | ||||||||| || || ||
Sbjct 671825 TCAATGGTGTCGCTCGATTCGACCTCGAGCGTGATGGTCTTTCCGGT 671871
>seq2
Length=8083196
Score = 107 bits (118), Expect = 2e-18
Identities = 133/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||||||||| ||||||||| | |||||| | || ||||| |||||||||||||| |
Sbjct 5300566 CCTTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGA 5300507
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| |||||||||||| | || | | |||||||| |||||| ||| | |
Sbjct 5300506 TCAGGCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTAACATTGT 5300447
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | ||| || ||| || || || | |||||||| ||||||||||| || || || |
Sbjct 5300446 CGATCGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 5300387
Query 46584 AG 46585
||
Sbjct 5300386 AG 5300385
>seq3
Length=7540789
Score = 102 bits (112), Expect = 9e-17
Identities = 92/116 (79%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
||||| |||| || |||||| ||||| ||||||||||| ||||| || |||| |||
Sbjct 3360409 ACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCG 3360350
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|| |||||||||||||| || | ||| |||||||| | ||| | || ||||||||
Sbjct 3360349 AGTTGCTTGCCGGCGAAGATGAGGCGTTGCTGGTCTGGCGGGATGCCTTCCTTGTC 3360294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565238138577240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |