Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq6 196 5e-45 seq4 111 2e-19 seq2 93.3 4e-14 seq3 84.2 2e-11 >seq6 Length=1840879 Score = 196 bits (216), Expect = 5e-45 Identities = 368/531 (69%), Gaps = 20/531 (4%) Strand=Plus/Minus Query 132610 TATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATA 132669 || ||||| || |||||| || ||||| || || ||| | | || ||| | ||| Sbjct 490985 TAGTCGCCGACACGTTTCTCGAAGAAATTGGTCTTGCCCGCGAGCGAGATGTTCTCCATG 490926 Query 132670 AAATCCAAGGGGTTGGCTGTGTTGTAGT---GCTTGGTGCCGATCAGGTCGACGAGCAGC 132726 || |||||||| | ||||||| ||||| |||| |||| ||| ||||| Sbjct 490925 AAGGGGAAGGGGTTCTGGGCGTTGTAGACGCGCTTGTTGCC---CAGGGCGAGCAGCAGG 490869 Query 132727 CTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACG 132785 | |||||| |||||||||||||| || ||| | || || || | ||||| ||| | Sbjct 490868 CGGTCGGCGACGAACTCGATGTACTGTTGCATCAGCTTGGCG-TTCATTCCCAACAGGCC 490810 Query 132786 CACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGAT--- 132842 || || || || ||||| || || | ||||||| | || || ||||||| ||| Sbjct 490809 GACGGGAAGAGCATCGGTCAGGAATTCCTTCTCGATGCCCACGGCTTCGGTGATGATGTG 490750 Query 132843 TTCCCTAACGCGCGCCGCGCTCGGCCGT-TGCACCAAATGCTTGAACATCAAGCAAGCAA 132901 ||| | | |||| | | || ||| | ||| |||||||| | || || ||| |||| Sbjct 490749 TTCGATCA---GCGCGGGG-TCTGCCTTGTGCTTCAAATGCTGCATCAGCAGGCAGGCAA 490694 Query 132902 AGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCA 132961 ||||| |||| ||||||||| | || |||||||| ||| ||| |||| |||||||| Sbjct 490693 AGTCGGTGTGCATGCCCTCGTCGCGCGAGATGAGTTCATTGGAGAAGGTCAGGCCGGGCA 490634 Query 132962 TGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCT 133021 | || || | || ||||| || |||| |||||| ||| || ||||| | |||| Sbjct 490633 TCAGACCCTTGCTCTTCAGCCAGAAGATGGACGCGAAAGAGCCGGAGAAGAAAATACCCT 490574 Query 133022 CGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGC 133081 ||||||| ||||| ||||| || || | | |||| ||| || ||| | |||||| Sbjct 490573 CGACGGCGGCGAACGCCACGAGTCGTTGGGCGAAGCTGGACTCCTTGTCCGAGATCCACT 490514 Query 133082 GCAGCGCCCATTCGGCCTTTTCTT--TGACGCACGGCATCGTTTCGATGGC 133130 || ||||| ||||| |||||| || ||| || ||||| || ||||| Sbjct 490513 TCAATGCCCAATCGGC--TTTCTTGCGGATGCAGGGAATCGTGTCAATGGC 490465 Score = 111 bits (122), Expect = 2e-19 Identities = 149/204 (73%), Gaps = 5/204 (2%) Strand=Plus/Minus Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAA-CGCTCGACCAGATT 133286 || || ||||| || ||||| ||||| || || | || ||| ||||||| ||| || Sbjct 490309 CCATAGAAGCATCGTGCCTCCGGGACCTGGACCTCG-GCGCTAAAGCGCTCGAGCAGGTT 490251 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 |||||||||||||||||| || ||||| || |||| |||||| || ||||| || Sbjct 490250 CTCGTTGACGATGCCGTCGGAAGCAGCGAAGAACGCCAAGACGTGCGAGACGAAATAACG 490191 Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 ||||| || |||| || | ||||||| | || |||||||| ||||| || || Sbjct 490190 CTCGTCATCATTCAGACGGTTGTGCCAGTCGTGAAGATCTTTGGACAGATCCACTTCTTC 490131 Query 133404 GACGGTCCAAAACGACGCCTCGGC 133427 | ||||||| || || ||||| || Sbjct 490130 GGCGGTCCAGAATGAAGCCTCAGC 490107 >seq4 Length=4536433 Score = 111 bits (122), Expect = 2e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||||||||||||| | || || || | | Sbjct 671439 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAAACCATCACCCTGGATGTAGAATCGTCA 671380 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | ||| || |||| ||||| ||||| || || | ||||| Sbjct 671379 GACACTATTGACAACG-TGAAATCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCA 671321 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | ||| ||||| || || || |||| || || || ||||||||| Sbjct 671320 ACAACGATTGATCTTCGCAGGCAAGCAACTCGAAGACGGCCGAACTCTTTCCGACTACAA 671261 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||| |||||| | || || ||| |||| || Sbjct 671260 CATCCAGAAGGAATCCACTCTTCATCTGGTACT 671228 Score = 111 bits (122), Expect = 2e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325 |||| || || |||||||| |||| ||||| | | ||||| | | | | | ||| Sbjct 671873 TCACCGGAAAGACCATCACGCTCGAGGTCGAATCGAGCGACACCATTGACAATGTCAAAT 671814 Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 || |||| ||||| || || ||||| ||||||| ||||| || || | ||| || | Sbjct 671813 CCAAGATCCAGGACAAGGAAGGCATTCCTCCCGACCAGCAGCGCCTGATCTTCGCCGGAA 671754 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 | || || || |||| |||||| | | |||||||||||||||||||||| | || || | Sbjct 671753 AGCAACTTGAAGACGGCCGCACCTTGAGCGACTACAACATCCAAAAGGAATCTACTCTAC 671694 Query 38446 ATTTGGTGCTGCGT 38459 | ||||| || ||| Sbjct 671693 ACTTGGTTCTCCGT 671680 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| ||||| || |||| ||||| | | | Sbjct 671667 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATTACGCTCGAGGTCGAATCGAGC 671608 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | ||| || || | ||||| || || ||||| ||||||| Sbjct 671607 GATACCATCGACAACG-TCAAATCCAAGATTCAAGACAAGGAAGGCATTCCTCCCGACCA 671549 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| || || || || || |||| |||||| | | ||| ||||| Sbjct 671548 GCAGCGCCTGATCTTCGCCGGAAAGCAACTTGAAGACGGCCGCACCTTGAGCGATTACAA 671489 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| || ||| | || ||||| | || || || | | |||||| Sbjct 671488 CATCCAGAAAGAATCCACCTTGCATCTCGTCCTCCGACTCCGTGGCGGC 671440 >seq2 Length=8083196 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| ||||||||| | || |||||| | | || | | Sbjct 5300386 TTCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCGGATACGATC 5300445 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | |||| || |||| ||||| || ||||| || | ||||| ||||| || Sbjct 5300446 GACAATGTTAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCGGACCAGCAGCGCCTG 5300505 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| ||||| || || || || | ||||| | | ||||||||||||||||||| Sbjct 5300506 ATCTTCGCCGGCAAGCAACTCGAGGATGGCCGCACTTTGAGCGACTACAACATCCAAAAG 5300565 Query 38433 G 38433 | Sbjct 5300566 G 5300566 >seq3 Length=7540789 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 38337 GACAAAGAGGGAATTCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGA 38395 ||||| || || || |||||| ||||| || || ||||| | ||| ||||| || || || Sbjct 3360294 GACAAGGAAGGCAT-CCCGCCAGACCAGCAACGCCTCATCTTCGCCGGCAAGCAACTCGA 3360352 Query 38396 CGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||| || || ||| ||||||||||||||| ||||| |||| ||||| |||| || Sbjct 3360353 AGACGGCCGTACTCTCTCCGACTACAACATCCAGAAGGAGTCGACTCTGCACCTGGTCCT 3360412 Query 38456 GCG 38458 || Sbjct 3360413 CCG 3360415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172568670080