Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq6 196 5e-45
seq4 111 2e-19
seq2 93.3 4e-14
seq3 84.2 2e-11
>seq6
Length=1840879
Score = 196 bits (216), Expect = 5e-45
Identities = 368/531 (69%), Gaps = 20/531 (4%)
Strand=Plus/Minus
Query 132610 TATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATA 132669
|| ||||| || |||||| || ||||| || || ||| | | || ||| | |||
Sbjct 490985 TAGTCGCCGACACGTTTCTCGAAGAAATTGGTCTTGCCCGCGAGCGAGATGTTCTCCATG 490926
Query 132670 AAATCCAAGGGGTTGGCTGTGTTGTAGT---GCTTGGTGCCGATCAGGTCGACGAGCAGC 132726
|| |||||||| | ||||||| ||||| |||| |||| ||| |||||
Sbjct 490925 AAGGGGAAGGGGTTCTGGGCGTTGTAGACGCGCTTGTTGCC---CAGGGCGAGCAGCAGG 490869
Query 132727 CTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACG 132785
| |||||| |||||||||||||| || ||| | || || || | ||||| ||| |
Sbjct 490868 CGGTCGGCGACGAACTCGATGTACTGTTGCATCAGCTTGGCG-TTCATTCCCAACAGGCC 490810
Query 132786 CACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGAT--- 132842
|| || || || ||||| || || | ||||||| | || || ||||||| |||
Sbjct 490809 GACGGGAAGAGCATCGGTCAGGAATTCCTTCTCGATGCCCACGGCTTCGGTGATGATGTG 490750
Query 132843 TTCCCTAACGCGCGCCGCGCTCGGCCGT-TGCACCAAATGCTTGAACATCAAGCAAGCAA 132901
||| | | |||| | | || ||| | ||| |||||||| | || || ||| ||||
Sbjct 490749 TTCGATCA---GCGCGGGG-TCTGCCTTGTGCTTCAAATGCTGCATCAGCAGGCAGGCAA 490694
Query 132902 AGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCA 132961
||||| |||| ||||||||| | || |||||||| ||| ||| |||| ||||||||
Sbjct 490693 AGTCGGTGTGCATGCCCTCGTCGCGCGAGATGAGTTCATTGGAGAAGGTCAGGCCGGGCA 490634
Query 132962 TGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCT 133021
| || || | || ||||| || |||| |||||| ||| || ||||| | ||||
Sbjct 490633 TCAGACCCTTGCTCTTCAGCCAGAAGATGGACGCGAAAGAGCCGGAGAAGAAAATACCCT 490574
Query 133022 CGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGC 133081
||||||| ||||| ||||| || || | | |||| ||| || ||| | ||||||
Sbjct 490573 CGACGGCGGCGAACGCCACGAGTCGTTGGGCGAAGCTGGACTCCTTGTCCGAGATCCACT 490514
Query 133082 GCAGCGCCCATTCGGCCTTTTCTT--TGACGCACGGCATCGTTTCGATGGC 133130
|| ||||| ||||| |||||| || ||| || ||||| || |||||
Sbjct 490513 TCAATGCCCAATCGGC--TTTCTTGCGGATGCAGGGAATCGTGTCAATGGC 490465
Score = 111 bits (122), Expect = 2e-19
Identities = 149/204 (73%), Gaps = 5/204 (2%)
Strand=Plus/Minus
Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAA-CGCTCGACCAGATT 133286
|| || ||||| || ||||| ||||| || || | || ||| ||||||| ||| ||
Sbjct 490309 CCATAGAAGCATCGTGCCTCCGGGACCTGGACCTCG-GCGCTAAAGCGCTCGAGCAGGTT 490251
Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346
|||||||||||||||||| || ||||| || |||| |||||| || ||||| ||
Sbjct 490250 CTCGTTGACGATGCCGTCGGAAGCAGCGAAGAACGCCAAGACGTGCGAGACGAAATAACG 490191
Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403
||||| || |||| || | ||||||| | || |||||||| ||||| || ||
Sbjct 490190 CTCGTCATCATTCAGACGGTTGTGCCAGTCGTGAAGATCTTTGGACAGATCCACTTCTTC 490131
Query 133404 GACGGTCCAAAACGACGCCTCGGC 133427
| ||||||| || || ||||| ||
Sbjct 490130 GGCGGTCCAGAATGAAGCCTCAGC 490107
>seq4
Length=4536433
Score = 111 bits (122), Expect = 2e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || ||||| ||||||||||||||| | || || || | |
Sbjct 671439 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAAACCATCACCCTGGATGTAGAATCGTCA 671380
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | ||| || |||| ||||| ||||| || || | |||||
Sbjct 671379 GACACTATTGACAACG-TGAAATCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCA 671321
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | ||| ||||| || || || |||| || || || |||||||||
Sbjct 671320 ACAACGATTGATCTTCGCAGGCAAGCAACTCGAAGACGGCCGAACTCTTTCCGACTACAA 671261
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
|||||| |||||| | || || ||| |||| ||
Sbjct 671260 CATCCAGAAGGAATCCACTCTTCATCTGGTACT 671228
Score = 111 bits (122), Expect = 2e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325
|||| || || |||||||| |||| ||||| | | ||||| | | | | | |||
Sbjct 671873 TCACCGGAAAGACCATCACGCTCGAGGTCGAATCGAGCGACACCATTGACAATGTCAAAT 671814
Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385
|| |||| ||||| || || ||||| ||||||| ||||| || || | ||| || |
Sbjct 671813 CCAAGATCCAGGACAAGGAAGGCATTCCTCCCGACCAGCAGCGCCTGATCTTCGCCGGAA 671754
Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445
| || || || |||| |||||| | | |||||||||||||||||||||| | || || |
Sbjct 671753 AGCAACTTGAAGACGGCCGCACCTTGAGCGACTACAACATCCAAAAGGAATCTACTCTAC 671694
Query 38446 ATTTGGTGCTGCGT 38459
| ||||| || |||
Sbjct 671693 ACTTGGTTCTCCGT 671680
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| ||||| || |||| ||||| | | |
Sbjct 671667 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATTACGCTCGAGGTCGAATCGAGC 671608
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| | ||| || || | ||||| || || ||||| |||||||
Sbjct 671607 GATACCATCGACAACG-TCAAATCCAAGATTCAAGACAAGGAAGGCATTCCTCCCGACCA 671549
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | ||| || || || || || |||| |||||| | | ||| |||||
Sbjct 671548 GCAGCGCCTGATCTTCGCCGGAAAGCAACTTGAAGACGGCCGCACCTTGAGCGATTACAA 671489
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| || ||| | || ||||| | || || || | | ||||||
Sbjct 671488 CATCCAGAAAGAATCCACCTTGCATCTCGTCCTCCGACTCCGTGGCGGC 671440
>seq2
Length=8083196
Score = 93.3 bits (102), Expect = 4e-14
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || |||||||| ||||||||| | || |||||| | | || | |
Sbjct 5300386 TTCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCGGATACGATC 5300445
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | |||| || |||| ||||| || ||||| || | ||||| ||||| ||
Sbjct 5300446 GACAATGTTAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCGGACCAGCAGCGCCTG 5300505
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | ||| ||||| || || || || | ||||| | | |||||||||||||||||||
Sbjct 5300506 ATCTTCGCCGGCAAGCAACTCGAGGATGGCCGCACTTTGAGCGACTACAACATCCAAAAG 5300565
Query 38433 G 38433
|
Sbjct 5300566 G 5300566
>seq3
Length=7540789
Score = 84.2 bits (92), Expect = 2e-11
Identities = 94/123 (76%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 38337 GACAAAGAGGGAATTCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGA 38395
||||| || || || |||||| ||||| || || ||||| | ||| ||||| || || ||
Sbjct 3360294 GACAAGGAAGGCAT-CCCGCCAGACCAGCAACGCCTCATCTTCGCCGGCAAGCAACTCGA 3360352
Query 38396 CGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
|||| || || ||| ||||||||||||||| ||||| |||| ||||| |||| ||
Sbjct 3360353 AGACGGCCGTACTCTCTCCGACTACAACATCCAGAAGGAGTCGACTCTGCACCTGGTCCT 3360412
Query 38456 GCG 38458
||
Sbjct 3360413 CCG 3360415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172568670080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |