Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2 221 1e-52 >seq2 Length=8083196 Score = 221 bits (244), Expect = 1e-52 Identities = 548/818 (67%), Gaps = 29/818 (4%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 |||||| | ||| ||||||| || | | || ||||| || || ||| | || | | Sbjct 1633768 CCACAGCATATGCTCATGCGTGTGTCCGTTGGCATCCACGGCGACGATGTCGAGAAGGCT 1633709 Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | |||| ||| || ||||| | | || | || | ||||| | || || ||||| Sbjct 1633708 ATTCAGACGTACAACCTCATGTCTCAGAAGTGTTTT-ACACACGCTTCCCCGACTCTCTT 1633650 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||||| || ||||| | ||||| ||||| || ||| | |||| | ||||| || Sbjct 1633649 CAACGCCGGCACACCTCAAGCCCAACTGTCCTCATGCTTCTTGATTGACATGAAGGAAGA 1633590 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 | || | || || |||| |||||||| |||||| ||||| ||| ||||| Sbjct 1633589 TAGCATTGAGGGTATCTACGACACTCTCAAGATCTGTGCCATGATCTCCAAGACTGCTGG 1633530 Query 111851 TGGTATCGGG----ATGCACA-TCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGT 111905 || || || |||| || | ||| | | || | | ||| ||| || Sbjct 1633529 CGGCATTGGACTCAATGCTCACTGCAT-----CCGGGCAACCGGTTCTTACATTGCCGGC 1633475 Query 111906 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 111965 || |||||| || | ||| | ||||| ||||| || || || ||| ||| || || Sbjct 1633474 ACCAATGGTACCTCCAACGGTCTCATTCCCATGCTGCGTGTTTTCAACAACACCGCCCGA 1633415 Query 111966 TATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCA 112019 ||||| |||||| ||| ||||| || | | || | || |||| ||||| ||| Sbjct 1633414 TATGTCGACCAAGGTGGCAACAAGCGTC-CAGGTG--CTTTTGCCATCTACCTTGAACCA 1633358 Query 112020 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCG 112079 |||||||| || || | || || | | |||| ||||| || | || || | Sbjct 1633357 TGGCACGCTGACGTCTTTGACTTTTTGAACCTGCGAAAGAACCACGGCAAGGAAGAAGT- 1633299 Query 112080 CGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 112138 | | || || || | |||| ||| || |||| || |||||||||||| || | ||||| Sbjct 1633298 CAGAGCACGTGACTTGTTCTACGCCCTTTGGACCCCGGATCTCTTCATGCAGCGTGTTGA 1633239 Query 112139 GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGT 112198 | ||| | | ||| | ||||| || ||| || |||| || ||||| | |||| | Sbjct 1633238 GAAGAATCAAGACTGGACACTCTTCTGCCCACACGAGGCCCCTGGTCTTGCTGATGTCTA 1633179 Query 112199 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGG--CGACTGCG 112256 ||||| ||||| || || |||||| ||||||||| | ||| | || | |||| | Sbjct 1633178 CGGTGACGAGTTCGAGGCACTCTACGAGAAGTACGAGAAGGAAGGACGAGGTCGACAG-- 1633121 Query 112257 ACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 112315 || | | || | || | ||||| | || |||||| ||||||||||||||||||| || Sbjct 1633120 ACCAT-CAAGGCCCAGAAGCTGTGGTATGCCATTCTCGAGTCTCAAACCGAGACTGGGAC 1633062 Query 112316 ACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 112375 ||||| |||||||| || || || || ||| | ||||| || || |||||| |||| Sbjct 1633061 GCCATACATGCTTTATAAGGATGCGTGCAACAAGAAGAGCAACCAGAAGAATCTGGGAAC 1633002 Query 112376 GATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAAT 112413 ||| |||||||||| | || ||||| || | |||| Sbjct 1633001 AATCCGGAGTTCCAACTTGTGCACAGAGATTGTCGAAT 1632964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742112906640