Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq3 125 8e-24 >seq3 Length=7540789 Score = 125 bits (138), Expect = 8e-24 Identities = 184/258 (71%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 ||| | ||||| | || ||||| ||||| || || || || || |||||||| | Sbjct 1330095 CAACGATTTGGCGTGCCAATGGGTTACGGCGGACCCCACGCGGCGTTCTTTGCTTGCAGT 1330036 Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562 || ||| | || | ||||| ||||| || | || ||| || ||| || || Sbjct 1330035 GAAAAGCACAAACGCAAGATCCCTGGTCGACTGGTCGGTGTTTCTAAGGATCGCCTTGGC 1329976 Query 158563 AATAAAGCA-TACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGC 158621 || || ||| ||||||| || ||||| | |||||||||||||||||||| || || Sbjct 1329975 AACCGCGCTCTAC-GATTAGCCCTTCAGACGCGTGAGCAGCATATCAGAAGAGAAAAGGC 1329917 Query 158622 AACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGC 158681 ||||||||||||||||| || || |||||||| || |||||| || |||||||| Sbjct 1329916 TACCAGTAACATCTGCACTGCCCAGGCACTGCTAGCAAATATGAGTGCATTCTATGCCAT 1329857 Query 158682 ATATCATGGTGCAGATGG 158699 |||||||| |||| || Sbjct 1329856 CTATCATGGACCAGACGG 1329839 Score = 113 bits (124), Expect = 5e-20 Identities = 261/391 (67%), Gaps = 3/391 (1%) Strand=Plus/Minus Query 159388 AATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCA 159447 ||| | ||| | || || | || || ||||| || || ||||| || |||| |||||| Sbjct 1329069 AATATTTGTCTCATCCCCGTCTCTGCTCATGGCACCAACCCTGCCTCTGCAGCGATGGCT 1329010 Query 159448 GGGATGAAAGTTGTAGGTGTCAAGTGTGA--TGATGAT-GGCAACATAGACATCAAAGAT 159504 || ||||||||||| | || || || ||| | || || | ||||| || ||| Sbjct 1329009 GGAATGAAAGTTGTGCCCCTGAAATGCGACATGAAAACCGGAAATCTCGACATTAACGAT 1328950 Query 159505 CTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATATCCA 159564 | || ||||| | | ||| ||||| || || ||| | || ||||| Sbjct 1328949 TTGAAGGAGAAATGTGAAAAGCATAAGAGCGAACTAGCAGCCATAATGGTCACCTATCCT 1328890 Query 159565 TCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGAAT 159624 || |||||| ||||| | |||| || | || ||||||| ||||| | Sbjct 1328889 AGCACCTTTGGTGTCTTTGAGCCTGGAATCAAGGAGGTTTGCCAGATTGTACATGACCAC 1328830 Query 159625 GGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCA 159684 || ||||| || || | |||||||||||||| ||||| || | || | || || Sbjct 1328829 GGAGGTCAAGTGTACATGGATGGTGCAAATCTCAATGCGCAAATTGGCTTGTGCAATCCG 1328770 Query 159685 TGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACAT 159744 |||| ||| || ||||| || ||||| ||| | || ||||| ||||| ||||| ||| Sbjct 1328769 GGTGAGATTGGCGCCGATGTTTGCCATCTTAACCTTCACAAGACCTTCTGCATTCCTCAT 1328710 Query 159745 GGAGGTGGAGGTCCTGGCGTAGGTCCTATTG 159775 || ||||| || || || || || ||||||| Sbjct 1328709 GGTGGTGGTGGCCCGGGTGTCGGACCTATTG 1328679 Score = 105 bits (116), Expect = 8e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 157891 GGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTAGT 157950 || |||||||| || | ||| || | ||||| ||| ||||||| || || | || | Sbjct 1330674 GGCTACTATGGTACGAACACGCCATCGGTCATTCAGAGAAACGTGCTCGAAAGCCCCGCT 1330615 Query 157951 TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTA 158010 |||||||| |||||||||||| || || ||||| ||||| | |||||| || | Sbjct 1330614 TGGTACACCAGTTACACTCCCTACCAGGCAGAGATCAGCCAGGGGCGCTTGGAATCTCTC 1330555 Query 158011 TTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGCATCTCTA 158070 |||| | |||||| || | || || || || || || | || ||||| || ||| | Sbjct 1330554 CTCAACTTCCAAACTCTGGTGACGGATCTTACCGGTCTTGCCATTGCAAATGCCTCTGTC 1330495 Query 158071 TTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 | ||||||| ||||| || || ||||| ||| Sbjct 1330494 CTGGATGAAGGTACTGCGGCCGCGGAAGCGATG 1330462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050928026320