Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq3 125 8e-24
>seq3
Length=7540789
Score = 125 bits (138), Expect = 8e-24
Identities = 184/258 (71%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502
||| | ||||| | || ||||| ||||| || || || || || |||||||| |
Sbjct 1330095 CAACGATTTGGCGTGCCAATGGGTTACGGCGGACCCCACGCGGCGTTCTTTGCTTGCAGT 1330036
Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562
|| ||| | || | ||||| ||||| || | || ||| || ||| || ||
Sbjct 1330035 GAAAAGCACAAACGCAAGATCCCTGGTCGACTGGTCGGTGTTTCTAAGGATCGCCTTGGC 1329976
Query 158563 AATAAAGCA-TACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGC 158621
|| || ||| ||||||| || ||||| | |||||||||||||||||||| || ||
Sbjct 1329975 AACCGCGCTCTAC-GATTAGCCCTTCAGACGCGTGAGCAGCATATCAGAAGAGAAAAGGC 1329917
Query 158622 AACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGC 158681
||||||||||||||||| || || |||||||| || |||||| || ||||||||
Sbjct 1329916 TACCAGTAACATCTGCACTGCCCAGGCACTGCTAGCAAATATGAGTGCATTCTATGCCAT 1329857
Query 158682 ATATCATGGTGCAGATGG 158699
|||||||| |||| ||
Sbjct 1329856 CTATCATGGACCAGACGG 1329839
Score = 113 bits (124), Expect = 5e-20
Identities = 261/391 (67%), Gaps = 3/391 (1%)
Strand=Plus/Minus
Query 159388 AATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCA 159447
||| | ||| | || || | || || ||||| || || ||||| || |||| ||||||
Sbjct 1329069 AATATTTGTCTCATCCCCGTCTCTGCTCATGGCACCAACCCTGCCTCTGCAGCGATGGCT 1329010
Query 159448 GGGATGAAAGTTGTAGGTGTCAAGTGTGA--TGATGAT-GGCAACATAGACATCAAAGAT 159504
|| ||||||||||| | || || || ||| | || || | ||||| || |||
Sbjct 1329009 GGAATGAAAGTTGTGCCCCTGAAATGCGACATGAAAACCGGAAATCTCGACATTAACGAT 1328950
Query 159505 CTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATATCCA 159564
| || ||||| | | ||| ||||| || || ||| | || |||||
Sbjct 1328949 TTGAAGGAGAAATGTGAAAAGCATAAGAGCGAACTAGCAGCCATAATGGTCACCTATCCT 1328890
Query 159565 TCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGAAT 159624
|| |||||| ||||| | |||| || | || ||||||| ||||| |
Sbjct 1328889 AGCACCTTTGGTGTCTTTGAGCCTGGAATCAAGGAGGTTTGCCAGATTGTACATGACCAC 1328830
Query 159625 GGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCA 159684
|| ||||| || || | |||||||||||||| ||||| || | || | || ||
Sbjct 1328829 GGAGGTCAAGTGTACATGGATGGTGCAAATCTCAATGCGCAAATTGGCTTGTGCAATCCG 1328770
Query 159685 TGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACAT 159744
|||| ||| || ||||| || ||||| ||| | || ||||| ||||| ||||| |||
Sbjct 1328769 GGTGAGATTGGCGCCGATGTTTGCCATCTTAACCTTCACAAGACCTTCTGCATTCCTCAT 1328710
Query 159745 GGAGGTGGAGGTCCTGGCGTAGGTCCTATTG 159775
|| ||||| || || || || || |||||||
Sbjct 1328709 GGTGGTGGTGGCCCGGGTGTCGGACCTATTG 1328679
Score = 105 bits (116), Expect = 8e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 157891 GGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTAGT 157950
|| |||||||| || | ||| || | ||||| ||| ||||||| || || | || |
Sbjct 1330674 GGCTACTATGGTACGAACACGCCATCGGTCATTCAGAGAAACGTGCTCGAAAGCCCCGCT 1330615
Query 157951 TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTA 158010
|||||||| |||||||||||| || || ||||| ||||| | |||||| || |
Sbjct 1330614 TGGTACACCAGTTACACTCCCTACCAGGCAGAGATCAGCCAGGGGCGCTTGGAATCTCTC 1330555
Query 158011 TTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGCATCTCTA 158070
|||| | |||||| || | || || || || || || | || ||||| || ||| |
Sbjct 1330554 CTCAACTTCCAAACTCTGGTGACGGATCTTACCGGTCTTGCCATTGCAAATGCCTCTGTC 1330495
Query 158071 TTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103
| ||||||| ||||| || || ||||| |||
Sbjct 1330494 CTGGATGAAGGTACTGCGGCCGCGGAAGCGATG 1330462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588050928026320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |