Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq4 159 8e-34
seq2 127 5e-24
>seq4
Length=4536433
Score = 159 bits (176), Expect = 8e-34
Identities = 166/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
||||| | || || ||||||||||| || || || || ||||| |||| ||||||||
Sbjct 671222 AGTCTGAGTACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGG 671281
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|| |||||||| ||||| ||||||||||| | ||||||||||||||| || || || ||
Sbjct 671282 CCGTCTTCGAGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGGGATACCCTCC 671341
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|||||||| || || || ||||| ||||| ||||| || ||| || || |||||
Sbjct 671342 TTGTCTTGGATCTTGGATTTCACGTTGTCAATAGTGTCTGACGATTCTACATCCAGGGTG 671401
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| || || || || | ||| || ||||| | ||||||
Sbjct 671402 ATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 671439
Score = 154 bits (170), Expect = 3e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
||||||| || | ||| || ||| ||| || ||||| ||||| || | ||||| |
Sbjct 670994 AGTCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGATAGAGTGCGG 671053
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
||||| || | ||||| || || ||||| | ||| ||||||||||| |||||||||||
Sbjct 671054 CCATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCC 671113
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
||||| ||||| || ||||||||| |||||||||||||| |||||||| | ||
Sbjct 671114 TTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCACTTCTAAAGTG 671173
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||||||| |||| ||| || || || | |||||
Sbjct 671174 ATCGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211
Score = 131 bits (144), Expect = 4e-25
Identities = 152/201 (76%), Gaps = 8/201 (4%)
Strand=Plus/Plus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002
||||| ||||| || || ||||||||| |||| || | || ||||| || ||||| ||
Sbjct 671471 GTGGATTCTTTCTGGATGTTGTAATCGCTCAAG-GTGCGGCCGTCTTCAAGTTGCTTTCC 671529
Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062
|||||||| || || || ||||| |||||||||||||| ||||||||||| || ||
Sbjct 671530 GGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCTTGAATCTTGGATTT 671589
Query 195063 GACGTTCTCAATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAA 195119
|||||| || ||||| || ||| ||| || || || |||| ||||| || || |
Sbjct 671590 GACGTTGTCGATGGTATCGCTCGA---TTCGACCTCGAGCGTAATGGTCTTGCCGGTAAG 671646
Query 195120 AGTTTTTACGAACACTTGCAT 195140
||| || ||||| | ||||||
Sbjct 671647 AGTCTTGACGAAGATTTGCAT 671667
Score = 111 bits (122), Expect = 3e-19
Identities = 141/190 (74%), Gaps = 8/190 (4%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTT 194989
||| | ||| ||||| || || ||||| || ||||| ||| |||| || | || ||||
Sbjct 671686 AACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTCAAG-GTGCGGCCGTCTT 671744
Query 194990 CGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTT 195049
| || ||||| || |||||||| || || || ||||| |||||||||||||| ||||| |
Sbjct 671745 CAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCT 671804
Query 195050 GAATTTTTTGCTTGACGTTCTCAATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCG 195106
| || || ||||| || ||||||||||| ||| ||| || || || || | |
Sbjct 671805 GGATCTTGGATTTGACATTGTCAATGGTGTCGCTCGA---TTCGACCTCGAGCGTGATGG 671861
Query 195107 TCTTTCCTGT 195116
||||||| ||
Sbjct 671862 TCTTTCCGGT 671871
>seq2
Length=8083196
Score = 127 bits (140), Expect = 5e-24
Identities = 139/185 (75%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|||||||| || || ||||| |||||||||| || |||| ||||||||| ||||| ||
Sbjct 3687738 ACAAGGTGCAGGGTTGACTCCTTTTGAATATCATAGTCGGAAAGAGTTCTACCATCCTCT 3687797
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
| ||||| ||||||||||| | |||||||| ||||| || ||||| || || |||||
Sbjct 3687798 AATTGCTTTCCTGCGAAGATCAACCGTTGTTGATCTGGTGGGATGCCCTCCTTATCTTGG 3687857
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||| || || | ||||| ||| || ||||| |||| |||||
Sbjct 3687858 ATCTTAGACTTGACATTGTCGACAGTGTCGCTGGATTCGACCTCAAGTGTAATGGTCTTG 3687917
Query 195112 CCTGT 195116
|| ||
Sbjct 3687918 CCGGT 3687922
Score = 96.9 bits (106), Expect = 8e-15
Identities = 238/358 (66%), Gaps = 6/358 (2%)
Strand=Plus/Minus
Query 160514 TGGCACGTTGACATCTTTGACTTTGTCGA--TGCGAAA-AAGCCCGGAGGTGATGACCTG 160570
||||||| |||| ||||||||||| | | ||||||| || | ||| || ||
Sbjct 1633357 TGGCACGCTGACGTCTTTGACTTTTTGAACCTGCGAAAGAACCACGGCAAGGAAGA---A 1633301
Query 160571 ATGAGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTG 160630
| ||||| | || | ||||||||| | ||||| | ||||| |||||| || | ||
Sbjct 1633300 GTCAGAGCACGTGACTTGTTCTACGCCCTTTGGACCCCGGATCTCTTCATGCAGCGTGTT 1633241
Query 160631 AAAGACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTT 160690
| | ||| || |||| || ||||| || | || || ||||| |||| ||||||
Sbjct 1633240 GAGAAGAATCAAGACTGGACACTCTTCTGCCCACACGAGGCCCCTGGTCTTGCTGATGTC 1633181
Query 160691 TATGGTTCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAG 160750
|| ||| |||||||||| | || || || | ||||| || || ||| ||| | ||
Sbjct 1633180 TACGGTGACGAGTTCGAGGCACTCTACGAGAAGTACGAGAAGGAAGGACGAGGTCGACAG 1633121
Query 160751 GTCGTGAAGGCCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATG 160810
| | |||||||| | |||||| || ||| || | | ||| |||| || | |
Sbjct 1633120 ACCATCAAGGCCCAGAAGCTGTGGTATGCCATTCTCGAGTCTCAAACCGAGACTGGGACG 1633061
Query 160811 CCCTTTATCGCATACAAGGATGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGGAA 160868
|| | || || |||||||| | ||||| ||||||||||| | ||||
Sbjct 1633060 CCATACATGCTTTATAAGGATGCGTGCAACAAGAAGAGCAACCAGAAGAATCTGGGAA 1633003
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481074036379
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |