Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq7 105 5e-17
seq4 98.7 8e-15
>seq7
Length=702643
Score = 105 bits (116), Expect = 5e-17
Identities = 253/378 (67%), Gaps = 5/378 (1%)
Strand=Plus/Minus
Query 552210 AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAA 552269
|| || || |||||||||||||| ||||| || | || || || ||||| ||||| |
Sbjct 102552 AACCCCGACGAGGCTGTTGCCTACGGTGCTGCTGTCCAGGCTGCCATTCTCTCTGGCGAC 102493
Query 552270 ACTGA-TGAAAAACTACAAA--ATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGT 552326
||| | || | || || | || | ||| | ||||| | || || ||||| |||
Sbjct 102492 ACTTCCTCCAAGTCCACCAACGAGATCTTGCTTCTCGATGTGGCGCCGCTGTCTCTCGGT 102433
Query 552327 TTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGT 552386
| ||||| | || ||| | |||||| ||| ||| | | || || || || |||
Sbjct 102432 ATCGAAACTGCCGGTGGTGTCATGACTCCTCTCATCAAGCGCAACACCACCATCCCTACC 102373
Query 552387 AAAAAATCTCGTGT-ATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAAT 552445
|| ||||| || | ||| || || | || || || || | | ||| || ||| |
Sbjct 102372 AAGAAATC-CGAGACATTCTCCACCTTCTCCGACAACCAGCCAGGTGTCCTCATCCAAGT 102314
Query 552446 TTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGA 552505
| || || || | | ||| || || || || | |||||||| || | ||
Sbjct 102313 CTACGAGGGTGAGCGTGCACGCACGAAGGACAACAACCTACTTGGTAAGTTCGAATTGTC 102254
Query 552506 AGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGC 552565
|| || || ||||||||||| || || || |||||||| ||||| |||||| |||||||
Sbjct 102253 CGGCATCCCACCTGCTCCTCGCGGTGTTCCTCAAATTGAGGTTACATTCGATCTCGATGC 102194
Query 552566 CAATGGAATTTTGAATGT 552583
||| || || |||| ||
Sbjct 102193 CAACGGTATCATGAACGT 102176
>seq4
Length=4536433
Score = 98.7 bits (108), Expect = 8e-15
Identities = 158/222 (71%), Gaps = 4/222 (2%)
Strand=Plus/Plus
Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315
||| ||||| || ||||| | ||| |||||| || |||||||| ||| || |
Sbjct 671449 GAGTCGGAGGACGAGATGCAAGGTGGATTCTTTCTGGATGTTGTAATC-GCTCAAGGTGC 671507
Query 563316 TGAA-TCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374
| ||||||||||| |||||||| || || || | ||||| || |||||||| ||||
Sbjct 671508 GGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTT 671567
Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGA 563433
| || |||||||| || ||| || || || ||||| | || | | |||||
Sbjct 671568 CCTTGTCTTGAATCTTGGATTTGACGTTGTCGATGGTATC-GCTCGATTCGACCTCGAGC 671626
Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
|||| || || || |||||||| || ||||| |||||||||
Sbjct 671627 GTAATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCATA 671668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029294043273130
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |