Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq7 105 5e-17 seq4 98.7 8e-15 >seq7 Length=702643 Score = 105 bits (116), Expect = 5e-17 Identities = 253/378 (67%), Gaps = 5/378 (1%) Strand=Plus/Minus Query 552210 AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAA 552269 || || || |||||||||||||| ||||| || | || || || ||||| ||||| | Sbjct 102552 AACCCCGACGAGGCTGTTGCCTACGGTGCTGCTGTCCAGGCTGCCATTCTCTCTGGCGAC 102493 Query 552270 ACTGA-TGAAAAACTACAAA--ATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGT 552326 ||| | || | || || | || | ||| | ||||| | || || ||||| ||| Sbjct 102492 ACTTCCTCCAAGTCCACCAACGAGATCTTGCTTCTCGATGTGGCGCCGCTGTCTCTCGGT 102433 Query 552327 TTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGT 552386 | ||||| | || ||| | |||||| ||| ||| | | || || || || ||| Sbjct 102432 ATCGAAACTGCCGGTGGTGTCATGACTCCTCTCATCAAGCGCAACACCACCATCCCTACC 102373 Query 552387 AAAAAATCTCGTGT-ATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAAT 552445 || ||||| || | ||| || || | || || || || | | ||| || ||| | Sbjct 102372 AAGAAATC-CGAGACATTCTCCACCTTCTCCGACAACCAGCCAGGTGTCCTCATCCAAGT 102314 Query 552446 TTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGA 552505 | || || || | | ||| || || || || | |||||||| || | || Sbjct 102313 CTACGAGGGTGAGCGTGCACGCACGAAGGACAACAACCTACTTGGTAAGTTCGAATTGTC 102254 Query 552506 AGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGC 552565 || || || ||||||||||| || || || |||||||| ||||| |||||| ||||||| Sbjct 102253 CGGCATCCCACCTGCTCCTCGCGGTGTTCCTCAAATTGAGGTTACATTCGATCTCGATGC 102194 Query 552566 CAATGGAATTTTGAATGT 552583 ||| || || |||| || Sbjct 102193 CAACGGTATCATGAACGT 102176 >seq4 Length=4536433 Score = 98.7 bits (108), Expect = 8e-15 Identities = 158/222 (71%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||| ||||| || ||||| | ||| |||||| || |||||||| ||| || | Sbjct 671449 GAGTCGGAGGACGAGATGCAAGGTGGATTCTTTCTGGATGTTGTAATC-GCTCAAGGTGC 671507 Query 563316 TGAA-TCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 | ||||||||||| |||||||| || || || | ||||| || |||||||| |||| Sbjct 671508 GGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTT 671567 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGA 563433 | || |||||||| || ||| || || || ||||| | || | | ||||| Sbjct 671568 CCTTGTCTTGAATCTTGGATTTGACGTTGTCGATGGTATC-GCTCGATTCGACCTCGAGC 671626 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 |||| || || || |||||||| || ||||| ||||||||| Sbjct 671627 GTAATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCATA 671668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029294043273130