Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq4 122 7e-23
>seq4
Length=4536433
Score = 122 bits (134), Expect = 7e-23
Identities = 150/205 (73%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
|||||| || ||||| || || || ||||| |||| | ||||| | | || || | |||
Sbjct 671236 ATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCTTCGAGTTG 671295
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| ||||| || ||||| || ||||| || || || || || || || ||||| || ||
Sbjct 671296 CTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTT 671355
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
||| || | || | |||||| |||| ||| || || || |||| |||||||||||
Sbjct 671356 GGATTTCACGTTGTCAATAGTGTCTGACGATTCTACATCCAGGGTGATGGTTTTGCCGGT 671415
Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470
| ||| || || || || ||||||
Sbjct 671416 GAGAGTCTTGACGAAGATTTGCATG 671440
Score = 120 bits (132), Expect = 2e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || || ||||| || || || || ||||| || | | ||| | | |||| |||
Sbjct 671003 ACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGATAGAGTGCGGCCATCCTCC 671062
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
|||||||| || ||||| ||||| |||||||| || || ||||||||||| || || |||
Sbjct 671063 AATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGA 671122
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || || | || | ||||| || | |||||||| | ||||| ||| ||
Sbjct 671123 ATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCACTTCTAAAGTGATCGTCTTT 671182
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || | ||| || ||||| ||||||||
Sbjct 671183 CCAGTCAGAGTCTTGACAAAGATCTGCAT 671211
Score = 98.7 bits (108), Expect = 8e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| | ||| |||||||| || || ||||||||| | || | | | || || | |||
Sbjct 671464 ATGCAAGGTGGATTCTTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCGTCTTCAAGTTG 671523
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| || || || |||| ||||| || ||||| ||||||||||| || |||||||| ||
Sbjct 671524 CTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCTTGAATCTT 671583
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
||| || | || | || || || ||| || || || || | || ||||||||
Sbjct 671584 GGATTTGACGTTGTCGATGGTATCGCTCGATTCGACCTCGAGCGTAATGGTCTTGCCGGT 671643
Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469
| ||| || || || || |||||
Sbjct 671644 AAGAGTCTTGACGAAGATTTGCAT 671667
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| || || || |||||||| ||||| || ||||| ||| | || | | |
Sbjct 671680 ACGGAGAACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTCAAGGTGCGGCC 671739
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
|| || | |||||| || || || |||| ||||| || ||||| ||||||||||| ||
Sbjct 671740 GTCTTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTT 671799
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
|| || || || ||| ||| | || | ||||| || ||| || || || ||||
Sbjct 671800 GTCCTGGATCTTGGATTTGACATTGTCAATGGTGTCGCTCGATTCGACCTCGAGCGTGAT 671859
Query 101434 CGTTTTGCCGGT 101445
|| || |||||
Sbjct 671860 GGTCTTTCCGGT 671871
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396278221303209
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |