Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2 250 5e-61 seq6 206 5e-48 >seq2 Length=8083196 Score = 250 bits (276), Expect = 5e-61 Identities = 900/1385 (65%), Gaps = 47/1385 (3%) Strand=Plus/Plus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | ||||| || |||| || || | | ||| | ||| || |||||| Sbjct 1632348 GGGTTGACAACTTGGAACTCGCCTGCCAGGACACGGCGGGAGTATATGTTCGAGGTGTAG 1632407 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 || |||| || |||||||| ||||| ||||| | |||| || || ||||||||||| Sbjct 1632408 GGTTCGAAGCATTCGTTGTTGCCCAGGATCTGAGAAGTGGACGCAGTAGGCATGGGAGCG 1632467 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCC 213086 || ||||| ||| | || || |||| | || | | ||| |||||||| Sbjct 1632468 ACGAGGAGGGAGTTGCGGACACCATGCTTAGCAATCTCGGCCTTTAGCGAGTCCCAGTCC 1632527 Query 213087 CATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146 ||| ||||| | | ||||||||||| ||| |||| | ||| |||| | Sbjct 1632528 CAT---------AGGTCTGAGGGAGTGACGTTCCACATATCATACTGGAGGATACCTTGG 1632578 Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206 || |||||||| | ||| | ||||| || || | |||| || || || || || Sbjct 1632579 GAGACTGGGCTGCCTTCGTATGTCGAGTAAGGCCCCTCTTCCTGCGCGAGTTCACACGAG 1632638 Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266 || |||||||||| |||||||||||| || || | | ||||| | ||||| Sbjct 1632639 GCGGTGAGGGCAGCGTGGTAGATGGTTTCGAAGATTTGGGTATTGAGTTGACGAGCCTCC 1632698 Query 213267 GGGGACGTGAAGGGCATCATCAT-GCGTTGGAACACATCAGCCAGCCCCTGGACCCCGAT 213325 || || ||| || | || ||| |||| |||| || || || || || |||| Sbjct 1632699 GGAGAGTCGAAAGGAAGACGCAGAGCGA-GGAAAGCATCTGCGAGGCCTTGAACACCGAG 1632757 Query 213326 GCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCA 213385 ||| || |||| ||||| | ||| ||| |||| | ||||| ||||| Sbjct 1632758 GCCAATAGGTCGGTGTCGGAAGTTGCTCTTCTTCGCCTCCGGGACCGGGTAGTAGTTGAC 1632817 Query 213386 GTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTG 213445 |||||||||||||| | |||||| ||| | |||| | ||| | | || || | Sbjct 1632818 ATCGATGATCTTGTTCAAGTTGCGAGTGACGACTTGGACGACCTCGTGGAG--AC----G 1632871 Query 213446 ATTGAACACGTA---GCCCCCGTCCTGC---ACAAACTCAGGCAGGGCGATGCTGGCCAG 213499 | ||| | || ||| | | | || || || || ||||| | | ||| || Sbjct 1632872 ACCGAAGTCATACTCGCCTCGGGCTTGATCGACGAAAGTGGGAAGGGCCAGGGAGGCAAG 1632931 Query 213500 GTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCT 213559 ||||| || || ||||| | || | ||||| || | ||||| ||||||| |||| Sbjct 1632932 ATTGCAGACTGCAACCTCATCAGGTGCGGTGTATTCGACAATCTCTGTGCACAAGTTGGA 1632991 Query 213560 GCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAG 213619 | ||||| || ||||| |||| ||||| ||| |||| | |||||| || || Sbjct 1632992 ACTCCGGATTGTTCCCAGATTCTTCTGGTTGCTCTTCTTGTTGCACGCATCCTTATAAAG 1633051 Query 213620 CATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGTACCTG 213677 |||||| || | ||| ||||| || ||| | || || ||| ||| || | | | Sbjct 1633052 CATGTATGGCGTCCCAGTCTCGGTTTGAGACTCGAGAAT--GGCATACCACAGCTTCTGG 1633109 Query 213678 GCCTTGACCACCCGCCTGACAGC-TCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTT 213736 ||||||| | | | ||| | ||| | | |||||||| |||||||| | | Sbjct 1633110 GCCTTGATGGTCTGTC-GACCTCGTCCTTCCTT---CTCGTACTTCTCGTAGAGTGCCTC 1633165 Query 213737 GAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGA-CAGGATGCGGGACACATGAGGCTCC 213795 ||| |||| || |||| | || || || | || ||| || | ||| ||| Sbjct 1633166 GAACTCGTCACCGTAGACATCAGCAAGACCAGGGGCCTCGTGTGGG-CAGAAGAGTGTCC 1633224 Query 213796 AGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAAC 213854 |||| | | |||| || | ||||||||| || |||||| ||| || ||| |||| Sbjct 1633225 AGTCTTGATTCTTCTCA-ACACGCTGCATGAAGAGATCCGGGGTCCAAAGGGCGTAGAAC 1633283 Query 213855 AGGTCCC-TGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAA 213913 | ||| | || || || || ||| || ||| || ||||| | | ||||||||| Sbjct 1633284 AAGTCACGTGCTCTGACT-TCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAAAAGTCAAA 1633342 Query 213914 GATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCC 213970 || ||| |||||||| || || | |||||||||||| || || | || | ||||| || Sbjct 1633343 GACGTCAGCGTGCCATGGTTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACC 1633402 Query 213971 CTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGA 214030 ||||| || | ||| ||||||| | ||||| | ||| | || |||||||| Sbjct 1633403 TTGGTCGACATATCGGGCGGTGTTGTTGAAAACACGCAGCATGGGAATGAGACCGTTGGA 1633462 Query 214031 CTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGG--TTGCTCATGGAGAGC 214088 || ||||| || || || || || |||| |||| | | || ||| ||| Sbjct 1633463 GGTACCATTGGTGCCGGCAATGTAAGAACCGGTTGCCCGGATGCAGTGAGCAT--TGAGT 1633520 Query 214089 CCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCG 214148 || ||||| || || ||||||||||||||| ||| | | | ||| || ||| || Sbjct 1633521 CCAATGCCGCCAGCAGTCTTGGAGATCATGGCACAGATCTTGAGAGTGTCGTAGATACCC 1633580 Query 214149 GCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG-GACGA 214207 | ||||| || || | | || | ||||||||| || || | |||| || | | Sbjct 1633581 TCAATGCTATCTTCCTTCATGTCAATCAAGAAGCATGAGGACAG-TTGGGCTTGAGGTGT 1633639 Query 214208 GCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTA 214267 ||| | |||||| || || ||| || || | | | |||| | ||| | ||| |||| Sbjct 1633640 GCCGGCGTTGAAGAGAGTCGGGGAAGCGTGTGTAAAACACTTCTGAGACATGAGGTTGTA 1633699 Query 214268 GGTCT 214272 |||| Sbjct 1633700 CGTCT 1633704 >seq6 Length=1840879 Score = 206 bits (228), Expect = 5e-48 Identities = 366/529 (69%), Gaps = 11/529 (2%) Strand=Plus/Minus Query 47842 GTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCAT 47901 |||||| || || | ||||| ||||| || ||||| ||| | | ||||||||||||||| Sbjct 490986 GTAGTCGCCGACACGTTTCTCGAAGAAATTGGTCTTGCCCGCGAGCGAGATGTTCTCCAT 490927 Query 47902 GAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAGGTG 47961 |||| |||||||||| | | ||| || || || | ||||| ||||||| | Sbjct 490926 GAAGGGGAAGGGGTTCTGGGCGTTGTAGACGCGCTTGTTGCCCAGGGCGAGCAGCAGGCG 490867 Query 47962 ATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACAC 48021 || |||||| |||||||||| | | ||| || || |||||| || | ||| || Sbjct 490866 GTCGGCGACGAACTCGATGTACTGTTGCATCAGCTTGGCGTTCATTCCCAACAGGCCGAC 490807 Query 48022 GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTT 48081 ||| | ||| | || || || |||||||| || ||||||||| | || || | Sbjct 490806 GGGAAGAGCATCGGTCAGGAATTCCTTCTCGATGCCCACGGCTTCGGTGATGATGTGTTC 490747 Query 48082 AA----CGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAA 48137 | |||||| |||| |||| || |||| |||| |||| |||||||| Sbjct 490746 GATCAGCGCGGGG-TCTGCC---TTGTGCTTCAAATGCT--GCATC-AGCAGGCAGGCAA 490694 Query 48138 AGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCA 48197 |||| |||||| ||| ||||| || |||||| | ||||||||| || || |||| Sbjct 490693 AGTCGGTGTGCATGCCCTCGTCGCGCGAGATGAGTTCATTGGAGAAGGTCAGGCCGGGCA 490634 Query 48198 TGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCT 48257 | | ||| | || |||||||| || | |||||||||||| |||||||| || |||| Sbjct 490633 TCAGACCCTTGCTCTTCAGCCAGAAGATGGACGCGAAAGAGCCGGAGAAGAAAATACCCT 490574 Query 48258 CCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGG 48317 | || || |||||||| ||| | | |||| | | |||||| |||||||| Sbjct 490573 CGACGGCGGCGAACGCCACGAGTCGTTGGGCGAAGCTGGACTCCTTGTCCGAGATCCACT 490514 Query 48318 AAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 | ||||| || || ||||| |||||| || ||||| || ||||| Sbjct 490513 TCAATGCCCAATCGGCTTTCTTGCGGATGCAGGGAATCGTGTCAATGGC 490465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532369166080