Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq2 250 5e-61
seq6 206 5e-48
>seq2
Length=8083196
Score = 250 bits (276), Expect = 5e-61
Identities = 900/1385 (65%), Gaps = 47/1385 (3%)
Strand=Plus/Plus
Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966
|||||||| | ||||| || |||| || || | | ||| | ||| || ||||||
Sbjct 1632348 GGGTTGACAACTTGGAACTCGCCTGCCAGGACACGGCGGGAGTATATGTTCGAGGTGTAG 1632407
Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026
|| |||| || |||||||| ||||| ||||| | |||| || || |||||||||||
Sbjct 1632408 GGTTCGAAGCATTCGTTGTTGCCCAGGATCTGAGAAGTGGACGCAGTAGGCATGGGAGCG 1632467
Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCC 213086
|| ||||| ||| | || || |||| | || | | ||| ||||||||
Sbjct 1632468 ACGAGGAGGGAGTTGCGGACACCATGCTTAGCAATCTCGGCCTTTAGCGAGTCCCAGTCC 1632527
Query 213087 CATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146
||| ||||| | | ||||||||||| ||| |||| | ||| |||| |
Sbjct 1632528 CAT---------AGGTCTGAGGGAGTGACGTTCCACATATCATACTGGAGGATACCTTGG 1632578
Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206
|| |||||||| | ||| | ||||| || || | |||| || || || || ||
Sbjct 1632579 GAGACTGGGCTGCCTTCGTATGTCGAGTAAGGCCCCTCTTCCTGCGCGAGTTCACACGAG 1632638
Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266
|| |||||||||| |||||||||||| || || | | ||||| | |||||
Sbjct 1632639 GCGGTGAGGGCAGCGTGGTAGATGGTTTCGAAGATTTGGGTATTGAGTTGACGAGCCTCC 1632698
Query 213267 GGGGACGTGAAGGGCATCATCAT-GCGTTGGAACACATCAGCCAGCCCCTGGACCCCGAT 213325
|| || ||| || | || ||| |||| |||| || || || || || ||||
Sbjct 1632699 GGAGAGTCGAAAGGAAGACGCAGAGCGA-GGAAAGCATCTGCGAGGCCTTGAACACCGAG 1632757
Query 213326 GCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCA 213385
||| || |||| ||||| | ||| ||| |||| | ||||| |||||
Sbjct 1632758 GCCAATAGGTCGGTGTCGGAAGTTGCTCTTCTTCGCCTCCGGGACCGGGTAGTAGTTGAC 1632817
Query 213386 GTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTG 213445
|||||||||||||| | |||||| ||| | |||| | ||| | | || || |
Sbjct 1632818 ATCGATGATCTTGTTCAAGTTGCGAGTGACGACTTGGACGACCTCGTGGAG--AC----G 1632871
Query 213446 ATTGAACACGTA---GCCCCCGTCCTGC---ACAAACTCAGGCAGGGCGATGCTGGCCAG 213499
| ||| | || ||| | | | || || || || ||||| | | ||| ||
Sbjct 1632872 ACCGAAGTCATACTCGCCTCGGGCTTGATCGACGAAAGTGGGAAGGGCCAGGGAGGCAAG 1632931
Query 213500 GTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCT 213559
||||| || || ||||| | || | ||||| || | ||||| ||||||| ||||
Sbjct 1632932 ATTGCAGACTGCAACCTCATCAGGTGCGGTGTATTCGACAATCTCTGTGCACAAGTTGGA 1632991
Query 213560 GCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAG 213619
| ||||| || ||||| |||| ||||| ||| |||| | |||||| || ||
Sbjct 1632992 ACTCCGGATTGTTCCCAGATTCTTCTGGTTGCTCTTCTTGTTGCACGCATCCTTATAAAG 1633051
Query 213620 CATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGTACCTG 213677
|||||| || | ||| ||||| || ||| | || || ||| ||| || | | |
Sbjct 1633052 CATGTATGGCGTCCCAGTCTCGGTTTGAGACTCGAGAAT--GGCATACCACAGCTTCTGG 1633109
Query 213678 GCCTTGACCACCCGCCTGACAGC-TCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTT 213736
||||||| | | | ||| | ||| | | |||||||| |||||||| | |
Sbjct 1633110 GCCTTGATGGTCTGTC-GACCTCGTCCTTCCTT---CTCGTACTTCTCGTAGAGTGCCTC 1633165
Query 213737 GAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGA-CAGGATGCGGGACACATGAGGCTCC 213795
||| |||| || |||| | || || || | || ||| || | ||| |||
Sbjct 1633166 GAACTCGTCACCGTAGACATCAGCAAGACCAGGGGCCTCGTGTGGG-CAGAAGAGTGTCC 1633224
Query 213796 AGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAAC 213854
|||| | | |||| || | ||||||||| || |||||| ||| || ||| ||||
Sbjct 1633225 AGTCTTGATTCTTCTCA-ACACGCTGCATGAAGAGATCCGGGGTCCAAAGGGCGTAGAAC 1633283
Query 213855 AGGTCCC-TGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAA 213913
| ||| | || || || || ||| || ||| || ||||| | | |||||||||
Sbjct 1633284 AAGTCACGTGCTCTGACT-TCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAAAAGTCAAA 1633342
Query 213914 GATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCC 213970
|| ||| |||||||| || || | |||||||||||| || || | || | ||||| ||
Sbjct 1633343 GACGTCAGCGTGCCATGGTTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACC 1633402
Query 213971 CTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGA 214030
||||| || | ||| ||||||| | ||||| | ||| | || ||||||||
Sbjct 1633403 TTGGTCGACATATCGGGCGGTGTTGTTGAAAACACGCAGCATGGGAATGAGACCGTTGGA 1633462
Query 214031 CTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGG--TTGCTCATGGAGAGC 214088
|| ||||| || || || || || |||| |||| | | || ||| |||
Sbjct 1633463 GGTACCATTGGTGCCGGCAATGTAAGAACCGGTTGCCCGGATGCAGTGAGCAT--TGAGT 1633520
Query 214089 CCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCG 214148
|| ||||| || || ||||||||||||||| ||| | | | ||| || ||| ||
Sbjct 1633521 CCAATGCCGCCAGCAGTCTTGGAGATCATGGCACAGATCTTGAGAGTGTCGTAGATACCC 1633580
Query 214149 GCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG-GACGA 214207
| ||||| || || | | || | ||||||||| || || | |||| || | |
Sbjct 1633581 TCAATGCTATCTTCCTTCATGTCAATCAAGAAGCATGAGGACAG-TTGGGCTTGAGGTGT 1633639
Query 214208 GCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTA 214267
||| | |||||| || || ||| || || | | | |||| | ||| | ||| ||||
Sbjct 1633640 GCCGGCGTTGAAGAGAGTCGGGGAAGCGTGTGTAAAACACTTCTGAGACATGAGGTTGTA 1633699
Query 214268 GGTCT 214272
||||
Sbjct 1633700 CGTCT 1633704
>seq6
Length=1840879
Score = 206 bits (228), Expect = 5e-48
Identities = 366/529 (69%), Gaps = 11/529 (2%)
Strand=Plus/Minus
Query 47842 GTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCAT 47901
|||||| || || | ||||| ||||| || ||||| ||| | | |||||||||||||||
Sbjct 490986 GTAGTCGCCGACACGTTTCTCGAAGAAATTGGTCTTGCCCGCGAGCGAGATGTTCTCCAT 490927
Query 47902 GAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAGGTG 47961
|||| |||||||||| | | ||| || || || | ||||| ||||||| |
Sbjct 490926 GAAGGGGAAGGGGTTCTGGGCGTTGTAGACGCGCTTGTTGCCCAGGGCGAGCAGCAGGCG 490867
Query 47962 ATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACAC 48021
|| |||||| |||||||||| | | ||| || || |||||| || | ||| ||
Sbjct 490866 GTCGGCGACGAACTCGATGTACTGTTGCATCAGCTTGGCGTTCATTCCCAACAGGCCGAC 490807
Query 48022 GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTT 48081
||| | ||| | || || || |||||||| || ||||||||| | || || |
Sbjct 490806 GGGAAGAGCATCGGTCAGGAATTCCTTCTCGATGCCCACGGCTTCGGTGATGATGTGTTC 490747
Query 48082 AA----CGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAA 48137
| |||||| |||| |||| || |||| |||| |||| ||||||||
Sbjct 490746 GATCAGCGCGGGG-TCTGCC---TTGTGCTTCAAATGCT--GCATC-AGCAGGCAGGCAA 490694
Query 48138 AGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCA 48197
|||| |||||| ||| ||||| || |||||| | ||||||||| || || ||||
Sbjct 490693 AGTCGGTGTGCATGCCCTCGTCGCGCGAGATGAGTTCATTGGAGAAGGTCAGGCCGGGCA 490634
Query 48198 TGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCT 48257
| | ||| | || |||||||| || | |||||||||||| |||||||| || ||||
Sbjct 490633 TCAGACCCTTGCTCTTCAGCCAGAAGATGGACGCGAAAGAGCCGGAGAAGAAAATACCCT 490574
Query 48258 CCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGG 48317
| || || |||||||| ||| | | |||| | | |||||| ||||||||
Sbjct 490573 CGACGGCGGCGAACGCCACGAGTCGTTGGGCGAAGCTGGACTCCTTGTCCGAGATCCACT 490514
Query 48318 AAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366
| ||||| || || ||||| |||||| || ||||| || |||||
Sbjct 490513 TCAATGCCCAATCGGCTTTCTTGCGGATGCAGGGAATCGTGTCAATGGC 490465
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931532369166080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |