Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq2 84.2 1e-11
>seq2
Length=8083196
Score = 84.2 bits (92), Expect = 1e-11
Identities = 291/448 (65%), Gaps = 6/448 (1%)
Strand=Plus/Plus
Query 25915 ATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCT 25974
||| | |||||| || ||| || | ||| || |||| | || || || || || |
Sbjct 1633232 ATTCTTCTCAACACGCTGCATGAAGAGATCCGGGGTCCAAAGGGCGTAGAACAAGTCACG 1633291
Query 25975 CGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGA 26034
||||| | |||||| || ||||| |||||| || | || || ||||| | || |
Sbjct 1633292 TGCTCTGACTTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAAAAGTCAAAGACGTCAGC 1633351
Query 26035 GTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTAC 26094
|||||||||||| | ||||| |||||| |||| | || |||||||| || ||
Sbjct 1633352 GTGCCATGGTTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCTTGGTCGAC 1633411
Query 26095 GTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAAT-CCGT 26153
|||| || || | |||||||| || ||| |||| | | | |||| | | || |
Sbjct 1633412 ATATCGGGCGGTGTTGTTGAAAACACGCAGCATGGGAA-TGAGACCGTTGGAGGTACCAT 1633470
Query 26154 TTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCAC 26213
| |||| ||| | || || || | | || |||||||| | || || || |
Sbjct 1633471 TGGTGCCGGCAATGTAAGAACCGGTTGCCCGGATGCAGTGAGCATTGAGTCCAATGCCGC 1633530
Query 26214 CAGCCCATTTTGAAATAGCTGCACA-ATC-TGAAACTGTATCGAAAATTCCTTTTATGCT 26271
|||| || || || ||||| ||| ||| | || ||| | || || | |||||
Sbjct 1633531 CAGCAGTCTTGGAGATCATGGCACAGATCTTGAGA--GTGTCGTAGATACCCTCAATGCT 1633588
Query 26272 ATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATT 26331
||| | ||||| | | || || || || || | ||| | |||| ||| || | ||
Sbjct 1633589 ATCTTCCTTCATGTCAATCAAGAAGCATGAGGACAGTTGGGCTTGAGGTGTGCCGGCGTT 1633648
Query 26332 AAATAATGTCGGTGTAGCATGAGTATAA 26359
|| | ||||| | ||| || ||| ||
Sbjct 1633649 GAAGAGAGTCGGGGAAGCGTGTGTAAAA 1633676
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039885894775
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |