Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq3 134 2e-26 >seq3 Length=7540789 Score = 134 bits (148), Expect = 2e-26 Identities = 186/258 (72%), Gaps = 2/258 (1%) Strand=Plus/Plus Query 139263 CCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCT 139322 || |||| |||||||| ||||||||| || ||||||||| |||||||| || || Sbjct 1329839 CCGTCTGGTCCATGATAGATGGCATAGAATGCACTCATATTTGCTAGCAGTGCCTGGGCA 1329898 Query 139323 GTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCT 139382 ||||||||||||||||| || || |||||||| ||||||||||| | || || || ||| Sbjct 1329899 GTGCAGATGTTACTGGTAGCCTTTTCTCTTCTGATATGCTGCTCACGCGTCTGAAGGGCT 1329958 Query 139383 AATCTGTA-TGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTAT 139441 |||| ||| || | ||||| || ||| || ||| || | || ||||| || Sbjct 1329959 AATC-GTAGAGCGCGGTTGCCAAGGCGATCCTTAGAAACACCGACCAGTCGACCAGGGAT 1330017 Query 139442 CTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCAT 139501 ||| | || | ||| || | |||||||| || || || || || ||||| ||||| Sbjct 1330018 CTTGCGTTTGTGCTTTTCACTGCAAGCAAAGAACGCCGCGTGGGGTCCGCCGTAACCCAT 1330077 Query 139502 AGGAATACCAAACCTTTG 139519 || | ||||| | ||| Sbjct 1330078 TGGCACGCCAAATCGTTG 1330095 Score = 109 bits (120), Expect = 6e-19 Identities = 260/391 (66%), Gaps = 3/391 (1%) Strand=Plus/Plus Query 138187 CAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAAT 138246 ||||||| || || || || || ||||| ||||| ||||| ||||| ||||| || | | Sbjct 1328679 CAATAGGTCCGACACCCGGGCCACCACCACCATGAGGAATGCAGAAGGTCTTGTGAAGGT 1328738 Query 138247 TTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTA 138306 | ||||| || ||||| || ||| |||| || || | || | || ||||| | Sbjct 1328739 TAAGATGGCAAACATCGGCGCCAATCTCACCCGGATTGCACAAGCCAATTTGCGCATTGA 1328798 Query 138307 GATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATCTGTC 138366 ||||||||||||| | || || ||||| || | |||||| || |||| || | || Sbjct 1328799 GATTTGCACCATCCATGTACACTTGACCTCCGTGGTCATGTACAATCTGGCAAACCTCCT 1328858 Query 138367 TGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAGAGTT 138426 |||| | ||||| |||||| || ||||| || | ||| || || |||| Sbjct 1328859 TGATTCCAGGCTCAAAGACACCAAAGGTGCTAGGATAGGTGACCATTATGGCTGCTAGTT 1328918 Query 138427 CAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCC-ATCATCA 138485 | ||| | | ||||| || | ||| || ||||| | || || | ||| Sbjct 1328919 CGCTCTTATGCTTTTCACATTTCTCCTTCAAATCGTTAATGTCGAGATTTCCGGTTTTCA 1328978 Query 138486 --TCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGTTC 138543 || || || | |||||||||||||| ||||| ||||| ||||| || || | Sbjct 1328979 TGTCGCATTTCAGGGGCACAACTTTCATTCCAGCCATCGCTGCAGAGGCAGGGTTGGTGC 1329038 Query 138544 CATGTGCTGACTCTGGTATCAGACATACATT 138574 |||| || || | || || ||||| | ||| Sbjct 1329039 CATGAGCAGAGACGGGGATGAGACAAATATT 1329069 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||| || || || || ||||| ||||||| | | ||| || ||||| || | | || Sbjct 1330462 CATCGCTTCCGCGGCCGCAGTACCTTCATCCAGGACAGAGGCATTTGCAATGGCAAGACC 1330521 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 ||||| || || | || |||||| | |||| | || |||||| | ||||| || Sbjct 1330522 GGTAAGATCCGTCACCAGAGTTTGGAAGTTGAGGAGAGATTCCAAGCGCCCCTGGCTGAT 1330581 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038 ||| || || |||||||||||| ||||||||| || | || || ||||||| ||| Sbjct 1330582 CTCTGCCTGGTAGGGAGTGTAACTGGTGTACCAAGCGGGGCTTTCGAGCACGTTTCTCTG 1330641 Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCC 140071 ||||| | || || | || |||||||| || Sbjct 1330642 AATGACCGATGGCGTGTTCGTACCATAGTAGCC 1330674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998132213240