Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq3 134 2e-26
>seq3
Length=7540789
Score = 134 bits (148), Expect = 2e-26
Identities = 186/258 (72%), Gaps = 2/258 (1%)
Strand=Plus/Plus
Query 139263 CCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCT 139322
|| |||| |||||||| ||||||||| || ||||||||| |||||||| || ||
Sbjct 1329839 CCGTCTGGTCCATGATAGATGGCATAGAATGCACTCATATTTGCTAGCAGTGCCTGGGCA 1329898
Query 139323 GTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCT 139382
||||||||||||||||| || || |||||||| ||||||||||| | || || || |||
Sbjct 1329899 GTGCAGATGTTACTGGTAGCCTTTTCTCTTCTGATATGCTGCTCACGCGTCTGAAGGGCT 1329958
Query 139383 AATCTGTA-TGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTAT 139441
|||| ||| || | ||||| || ||| || ||| || | || ||||| ||
Sbjct 1329959 AATC-GTAGAGCGCGGTTGCCAAGGCGATCCTTAGAAACACCGACCAGTCGACCAGGGAT 1330017
Query 139442 CTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCAT 139501
||| | || | ||| || | |||||||| || || || || || ||||| |||||
Sbjct 1330018 CTTGCGTTTGTGCTTTTCACTGCAAGCAAAGAACGCCGCGTGGGGTCCGCCGTAACCCAT 1330077
Query 139502 AGGAATACCAAACCTTTG 139519
|| | ||||| | |||
Sbjct 1330078 TGGCACGCCAAATCGTTG 1330095
Score = 109 bits (120), Expect = 6e-19
Identities = 260/391 (66%), Gaps = 3/391 (1%)
Strand=Plus/Plus
Query 138187 CAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAAT 138246
||||||| || || || || || ||||| ||||| ||||| ||||| ||||| || | |
Sbjct 1328679 CAATAGGTCCGACACCCGGGCCACCACCACCATGAGGAATGCAGAAGGTCTTGTGAAGGT 1328738
Query 138247 TTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTA 138306
| ||||| || ||||| || ||| |||| || || | || | || ||||| |
Sbjct 1328739 TAAGATGGCAAACATCGGCGCCAATCTCACCCGGATTGCACAAGCCAATTTGCGCATTGA 1328798
Query 138307 GATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATCTGTC 138366
||||||||||||| | || || ||||| || | |||||| || |||| || | ||
Sbjct 1328799 GATTTGCACCATCCATGTACACTTGACCTCCGTGGTCATGTACAATCTGGCAAACCTCCT 1328858
Query 138367 TGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAGAGTT 138426
|||| | ||||| |||||| || ||||| || | ||| || || ||||
Sbjct 1328859 TGATTCCAGGCTCAAAGACACCAAAGGTGCTAGGATAGGTGACCATTATGGCTGCTAGTT 1328918
Query 138427 CAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCC-ATCATCA 138485
| ||| | | ||||| || | ||| || ||||| | || || | |||
Sbjct 1328919 CGCTCTTATGCTTTTCACATTTCTCCTTCAAATCGTTAATGTCGAGATTTCCGGTTTTCA 1328978
Query 138486 --TCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGTTC 138543
|| || || | |||||||||||||| ||||| ||||| ||||| || || |
Sbjct 1328979 TGTCGCATTTCAGGGGCACAACTTTCATTCCAGCCATCGCTGCAGAGGCAGGGTTGGTGC 1329038
Query 138544 CATGTGCTGACTCTGGTATCAGACATACATT 138574
|||| || || | || || ||||| | |||
Sbjct 1329039 CATGAGCAGAGACGGGGATGAGACAAATATT 1329069
Score = 96.9 bits (106), Expect = 4e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918
||| || || || || ||||| ||||||| | | ||| || ||||| || | | ||
Sbjct 1330462 CATCGCTTCCGCGGCCGCAGTACCTTCATCCAGGACAGAGGCATTTGCAATGGCAAGACC 1330521
Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978
||||| || || | || |||||| | |||| | || |||||| | ||||| ||
Sbjct 1330522 GGTAAGATCCGTCACCAGAGTTTGGAAGTTGAGGAGAGATTCCAAGCGCCCCTGGCTGAT 1330581
Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038
||| || || |||||||||||| ||||||||| || | || || ||||||| |||
Sbjct 1330582 CTCTGCCTGGTAGGGAGTGTAACTGGTGTACCAAGCGGGGCTTTCGAGCACGTTTCTCTG 1330641
Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCC 140071
||||| | || || | || |||||||| ||
Sbjct 1330642 AATGACCGATGGCGTGTTCGTACCATAGTAGCC 1330674
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578998132213240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |