Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2 178 2e-39 seq6 100 3e-16 >seq2 Length=8083196 Score = 178 bits (196), Expect = 2e-39 Identities = 572/872 (66%), Gaps = 33/872 (4%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| | ||| ||||||| || | | ||||||||||| || || | || | Sbjct 1633768 CCACAGCATATGCTCATGCGTGTGTCCGTTGGCATCCACGGCGACGATGTCGAGAAGGCT 1633709 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | |||| ||| || ||||| || | || | || | ||||| | || || ||||| Sbjct 1633708 ATTCAGACGTACAACCTCATGTCTCAGAAGTGTTTT-ACACACGCTTCCCCGACTCTCTT 1633650 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| || || ||||| | | || ||||| |||||| | || | || ||||| || Sbjct 1633649 CAACGCCGGCACACCTCAAGCCCAACTGTCCTCATGCTTCTTGATTGACATGAAGGAAGA 1633590 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 || | |||||||| | ||||| | | ||||| ||||| ||| ||||| Sbjct 1633589 TAGCATTGAGGGTATCTACGACACTCTCAAGATCTGTGCCATGATCTCCAAGACTGCTGG 1633530 Query 75451 GGGTATTGGG----ATGCACATCCATGATGTGAG-AGCCAATAAATCTCGTATTCGGGGG 75505 || ||||| |||| || | || | | | || | ||| ||| || Sbjct 1633529 CGGCATTGGACTCAATGCTCA--CTGCATCCGGGCAACCGGT---TCTTACATTGCCGGC 1633475 Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565 || |||||| || | ||| | ||||| ||||| || || || ||| ||| || || Sbjct 1633474 ACCAATGGTACCTCCAACGGTCTCATTCCCATGCTGCGTGTTTTCAACAACACCGCCCGA 1633415 Query 75566 TATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCA 75619 ||||| | |||| || ||||| ||| | | | || ||||| | |||||| Sbjct 1633414 TATGTCGACCAAGGTGGCAACAAGCGTCC--AGGTG-CTTTTGCCATCTACCTTGAACCA 1633358 Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCT 75679 ||||| || || || | || || | | | ||| ||||| || | ||||| | | Sbjct 1633357 TGGCACGCTGACGTCTTTGACTTTTTGAACCTGCGAAAGAACCACGGCAAGGAAGAAG-T 1633299 Query 75680 CGGTGTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGA 75738 | | | | | || | || | |||| |||| || || || |||||| |||| ||||| Sbjct 1633298 CAGAGCACGTGACTTGTTCTACGCCCTTTGGACCCCGGATCTCTTCATGCAGCGTGTTGA 1633239 Query 75739 GGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGT 75798 | || | | ||| | || ||||| ||| || |||| || ||||| | || | Sbjct 1633238 GAAGAATCAAGACTGGACACTCTTCTGCCCACACGAGGCCCCTGGTCTTGCTGATGTCTA 1633179 Query 75799 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGAC 75858 ||||| ||||| || || |||||| ||||| || |||| || ||| |||| Sbjct 1633178 CGGTGACGAGTTCGAGGCACTCTACGAGAAGTACGAGAAGGAAGGACGAGGT----CGAC 1633123 Query 75859 TGTACCAGCC--GCC--GATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGA 75913 | |||| | ||| || | | ||| | || |||||| | || || || |||||||| Sbjct 1633122 AG-ACCATCAAGGCCCAGAAGCTGTGGTATGCCATTCTCGAGTCTCAAACCGAGACTGGG 1633064 Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973 || ||||| |||||||| |||||||| || ||||||||||| ||||| |||||| ||||| Sbjct 1633063 ACGCCATACATGCTTTATAAGGATGCGTGCAACAAGAAGAGCAACCAGAAGAATCTGGGA 1633004 Query 75974 ACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACG 76033 |||||| ||| || || | ||||| || ||| | || ||||| | |||||| Sbjct 1633003 ACAATCCGGAGTTCCAACTTGTGCACAGAGATTGTCGAATACACCGCACCTGATGAGGTT 1632944 Query 76034 GCTGTTTGCAATTTGGCATCAATCGCCCTTCC 76065 || || |||||| | || || | |||||||| Sbjct 1632943 GCAGTCTGCAATCTTGCCTCCCTGGCCCTTCC 1632912 >seq6 Length=1840879 Score = 100 bits (110), Expect = 3e-16 Identities = 200/290 (69%), Gaps = 10/290 (3%) Strand=Plus/Plus Query 64945 TTGATTGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGT---TATTTGAAGCCATC 65001 |||||||||| ||||| || || | || ||||||||| | ||||| ||||| Sbjct 490414 TTGATTGACACGTACATCAACGACC---CCAAACAGAAGCAGTATCTCTTTGATGCCATT 490470 Query 65002 CAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTT-TGACACAAA 65060 | || | || || || ||||| || | |||||| |||| ||| | | |||| Sbjct 490471 GACACGATTCCCTGCATCCGCAAGAAAGCCGATTGGGCATTGAAGTGGATCTCGGACAAG 490530 Query 65061 GTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTC 65120 | || | ||||||| | || || | ||||| || || |||||||| |||||||| Sbjct 490531 GAGTC-CAGCTTCGCCCAACGACTCGTGGCGTTCGCCGCCGTCGAGGGTATTTTCTTCTC 490589 Query 65121 CGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCT 65179 ||| || ||| ||| | || | ||| |||||| |||||| ||||| ||||| || Sbjct 490590 CGGCTCTTTC-GCGTCCATCTTCTGGCTGAAGAGCAAGGGTCTGATGCCCGGCCTGACCT 490648 Query 65180 TCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 |||| |||||||| || || || || ||||| | ||| || |||||| Sbjct 490649 TCTCCAATGAACTCATCTCGCGCGACGAGGGCATGCACACCGACTTTGCC 490698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569324086560