Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq2 178 2e-39
seq6 100 3e-16
>seq2
Length=8083196
Score = 178 bits (196), Expect = 2e-39
Identities = 572/872 (66%), Gaps = 33/872 (4%)
Strand=Plus/Minus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|||||| | ||| ||||||| || | | ||||||||||| || || | || |
Sbjct 1633768 CCACAGCATATGCTCATGCGTGTGTCCGTTGGCATCCACGGCGACGATGTCGAGAAGGCT 1633709
Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330
| |||| ||| || ||||| || | || | || | ||||| | || || |||||
Sbjct 1633708 ATTCAGACGTACAACCTCATGTCTCAGAAGTGTTTT-ACACACGCTTCCCCGACTCTCTT 1633650
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
||| || || ||||| | | || ||||| |||||| | || | || ||||| ||
Sbjct 1633649 CAACGCCGGCACACCTCAAGCCCAACTGTCCTCATGCTTCTTGATTGACATGAAGGAAGA 1633590
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450
|| | |||||||| | ||||| | | ||||| ||||| ||| |||||
Sbjct 1633589 TAGCATTGAGGGTATCTACGACACTCTCAAGATCTGTGCCATGATCTCCAAGACTGCTGG 1633530
Query 75451 GGGTATTGGG----ATGCACATCCATGATGTGAG-AGCCAATAAATCTCGTATTCGGGGG 75505
|| ||||| |||| || | || | | | || | ||| ||| ||
Sbjct 1633529 CGGCATTGGACTCAATGCTCA--CTGCATCCGGGCAACCGGT---TCTTACATTGCCGGC 1633475
Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565
|| |||||| || | ||| | ||||| ||||| || || || ||| ||| || ||
Sbjct 1633474 ACCAATGGTACCTCCAACGGTCTCATTCCCATGCTGCGTGTTTTCAACAACACCGCCCGA 1633415
Query 75566 TATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCA 75619
||||| | |||| || ||||| ||| | | | || ||||| | ||||||
Sbjct 1633414 TATGTCGACCAAGGTGGCAACAAGCGTCC--AGGTG-CTTTTGCCATCTACCTTGAACCA 1633358
Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCT 75679
||||| || || || | || || | | | ||| ||||| || | ||||| | |
Sbjct 1633357 TGGCACGCTGACGTCTTTGACTTTTTGAACCTGCGAAAGAACCACGGCAAGGAAGAAG-T 1633299
Query 75680 CGGTGTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGA 75738
| | | | | || | || | |||| |||| || || || |||||| |||| |||||
Sbjct 1633298 CAGAGCACGTGACTTGTTCTACGCCCTTTGGACCCCGGATCTCTTCATGCAGCGTGTTGA 1633239
Query 75739 GGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGT 75798
| || | | ||| | || ||||| ||| || |||| || ||||| | || |
Sbjct 1633238 GAAGAATCAAGACTGGACACTCTTCTGCCCACACGAGGCCCCTGGTCTTGCTGATGTCTA 1633179
Query 75799 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGAC 75858
||||| ||||| || || |||||| ||||| || |||| || ||| ||||
Sbjct 1633178 CGGTGACGAGTTCGAGGCACTCTACGAGAAGTACGAGAAGGAAGGACGAGGT----CGAC 1633123
Query 75859 TGTACCAGCC--GCC--GATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGA 75913
| |||| | ||| || | | ||| | || |||||| | || || || ||||||||
Sbjct 1633122 AG-ACCATCAAGGCCCAGAAGCTGTGGTATGCCATTCTCGAGTCTCAAACCGAGACTGGG 1633064
Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973
|| ||||| |||||||| |||||||| || ||||||||||| ||||| |||||| |||||
Sbjct 1633063 ACGCCATACATGCTTTATAAGGATGCGTGCAACAAGAAGAGCAACCAGAAGAATCTGGGA 1633004
Query 75974 ACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACG 76033
|||||| ||| || || | ||||| || ||| | || ||||| | ||||||
Sbjct 1633003 ACAATCCGGAGTTCCAACTTGTGCACAGAGATTGTCGAATACACCGCACCTGATGAGGTT 1632944
Query 76034 GCTGTTTGCAATTTGGCATCAATCGCCCTTCC 76065
|| || |||||| | || || | ||||||||
Sbjct 1632943 GCAGTCTGCAATCTTGCCTCCCTGGCCCTTCC 1632912
>seq6
Length=1840879
Score = 100 bits (110), Expect = 3e-16
Identities = 200/290 (69%), Gaps = 10/290 (3%)
Strand=Plus/Plus
Query 64945 TTGATTGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGT---TATTTGAAGCCATC 65001
|||||||||| ||||| || || | || ||||||||| | ||||| |||||
Sbjct 490414 TTGATTGACACGTACATCAACGACC---CCAAACAGAAGCAGTATCTCTTTGATGCCATT 490470
Query 65002 CAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTT-TGACACAAA 65060
| || | || || || ||||| || | |||||| |||| ||| | | ||||
Sbjct 490471 GACACGATTCCCTGCATCCGCAAGAAAGCCGATTGGGCATTGAAGTGGATCTCGGACAAG 490530
Query 65061 GTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTC 65120
| || | ||||||| | || || | ||||| || || |||||||| ||||||||
Sbjct 490531 GAGTC-CAGCTTCGCCCAACGACTCGTGGCGTTCGCCGCCGTCGAGGGTATTTTCTTCTC 490589
Query 65121 CGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCT 65179
||| || ||| ||| | || | ||| |||||| |||||| ||||| ||||| ||
Sbjct 490590 CGGCTCTTTC-GCGTCCATCTTCTGGCTGAAGAGCAAGGGTCTGATGCCCGGCCTGACCT 490648
Query 65180 TCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229
|||| |||||||| || || || || ||||| | ||| || ||||||
Sbjct 490649 TCTCCAATGAACTCATCTCGCGCGACGAGGGCATGCACACCGACTTTGCC 490698
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569324086560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |