Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2 158 4e-33 seq5 91.5 4e-13 >seq2 Length=8083196 Score = 158 bits (174), Expect = 4e-33 Identities = 532/820 (65%), Gaps = 9/820 (1%) Strand=Plus/Plus Query 155626 CGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCT 155685 || ||||||| |||||||| ||||| ||| |||||| ||| || || | |||||||| Sbjct 1632958 CGGTGTATTCGACAATCTCTGTGCACAAGTTGGAACTCCGGATTGTTCCCAGATTCTTCT 1633017 Query 155686 GGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCT 155745 |||| || |||| || |||||||| || || |||||||| || || ||||| | | Sbjct 1633018 GGTTGCTCTTCTTGTTGCACGCATCCTTATAAAGCATGTATGGCGTCCCAGTCTCGGTTT 1633077 Query 155746 GTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTG-TATCTGCCT 155804 | | || ||||| ||| || | |||| || | | | ||| | || ||| Sbjct 1633078 GAGACTCGAGAATGGCATACCACAGCTTCTGGGCCTTGA-TGGTCTGTCGACCTCGTCCT 1633136 Query 155805 TCCGACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCA 155864 ||| ||| || ||| || || | | | || |||||||| |||| || ||| Sbjct 1633137 TCCTTCTCGTACTTCTCGTAGAGTGCCTCGAACTCGTCACCGTAGACATCAGCAAGACCA 1633196 Query 155865 GGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAAT 155924 ||| || | ||||| || || | ||| || ||| ||||||| ||| || Sbjct 1633197 GGGGCCTCGTGTGGGCAGAAGAGTGTCCAGTCTTGATTCTTCTCAACACGCTGCATGAAG 1633256 Query 155925 ACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC-TCCTCATCGCCGTG 155983 | ||| | ||||| || ||||| | ||| | || || |||| || || | |||||| Sbjct 1633257 AGATCCGGGGTCCAAAGGGCGTAGAACAAGTCACGTG-CTCTGACTTCTTCCTTGCCGTG 1633315 Query 155984 ATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGC 156043 ||||| || || | || || || | |||| || ||| || || || || || Sbjct 1633316 GTTCTTTCGCAGGTTCAAAAAGTCAAAGACGTCAGCGTGCCATGGTTCAAGGTAGATGGC 1633375 Query 156044 AAAACTACC---ATTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGAC 156100 |||| ||| | | | |||||||| || || ||||| || || || || ||||| || Sbjct 1633376 AAAAGCACCTGGACGCTTGTTGCCACCTTGGTCGACATATCGGGCGGTGTTGTTGAAAAC 1633435 Query 156101 ACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGA 156160 || ||||| ||||| | ||| ||||| || |||||||| ||| ||| | ||||| | Sbjct 1633436 ACGCAGCATGGGAATGAGACCGTTGGAGGTACCATTGGTGCCGGCAATGTAAGAACCGGT 1633495 Query 156161 TGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCA 156220 || || | ||| || |||||||| || || | || || || || || Sbjct 1633496 TGCCCGGATGCAGTGAGCATTGAGTCCAATGCCGCCAGCAGTCTTGGAGATCATGGCACA 1633555 Query 156221 TTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT-TGATAGTAGATAGC 156279 ||| | ||| | | | ||||| ||||| ||| || | ||| | | ||| ||| Sbjct 1633556 GATCTTGAGAGTGTCGTAGATACCCTCAATGCTATCTTCCTTCATGTCAATCAAGA-AGC 1633614 Query 156280 ACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAA 156339 | || | ||| | | | ||||| || |||||||| || || || | || || ||| Sbjct 1633615 ATGAGGACAGTTGGGCTTGAGGTGTGCCGGCGTTGAAGAGAGTCGGGGAAGCGTGTGTAA 1633674 Query 156340 AATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAA 156399 || |||| | |||||| | ||| |||| || |||||| | || ||||| | Sbjct 1633675 AACACTTCTGAGACATGAGGTTGTACGTCTGAATAGCCTTCTCGACATCGTCGCCGTGGA 1633734 Query 156400 TACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTC 156439 | | | || || | ||| ||||||||| || || || Sbjct 1633735 TGCCAACGGACACACGCATGAGCATATGCTGTGGTCGTTC 1633774 >seq5 Length=4186638 Score = 91.5 bits (100), Expect = 4e-13 Identities = 123/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || ||||| | | || || ||||| ||| | | ||| || |||| | ||||| Sbjct 2158302 ATGAGGCCACAGATGTCGCAGACGTGGACTCTGAAGGGATCCGAGACGTCGAAGAGCCGC 2158243 Query 251467 CCCTTGGTGAAGCGAG-ATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAA 251525 |||| ||| |||| | |||||||| | |||||| || || || |||||||||||||| Sbjct 2158242 TCCTTCAAGAA-CGAGGACGCACCGTGCGCAATCATGCAGTCTCGTTCCATTTCACCGAA 2158184 Query 251526 ACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGA 251574 || ||||||||||| | || | ||| ||| |||| || || || ||| Sbjct 2158183 TCGGAGACCACCATCTCTGGCACGACCTTCGACAGGTTGGCGGGTCAGA 2158135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816902266469