Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq2 158 4e-33
seq5 91.5 4e-13
>seq2
Length=8083196
Score = 158 bits (174), Expect = 4e-33
Identities = 532/820 (65%), Gaps = 9/820 (1%)
Strand=Plus/Plus
Query 155626 CGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCT 155685
|| ||||||| |||||||| ||||| ||| |||||| ||| || || | ||||||||
Sbjct 1632958 CGGTGTATTCGACAATCTCTGTGCACAAGTTGGAACTCCGGATTGTTCCCAGATTCTTCT 1633017
Query 155686 GGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCT 155745
|||| || |||| || |||||||| || || |||||||| || || ||||| | |
Sbjct 1633018 GGTTGCTCTTCTTGTTGCACGCATCCTTATAAAGCATGTATGGCGTCCCAGTCTCGGTTT 1633077
Query 155746 GTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTG-TATCTGCCT 155804
| | || ||||| ||| || | |||| || | | | ||| | || |||
Sbjct 1633078 GAGACTCGAGAATGGCATACCACAGCTTCTGGGCCTTGA-TGGTCTGTCGACCTCGTCCT 1633136
Query 155805 TCCGACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCA 155864
||| ||| || ||| || || | | | || |||||||| |||| || |||
Sbjct 1633137 TCCTTCTCGTACTTCTCGTAGAGTGCCTCGAACTCGTCACCGTAGACATCAGCAAGACCA 1633196
Query 155865 GGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAAT 155924
||| || | ||||| || || | ||| || ||| ||||||| ||| ||
Sbjct 1633197 GGGGCCTCGTGTGGGCAGAAGAGTGTCCAGTCTTGATTCTTCTCAACACGCTGCATGAAG 1633256
Query 155925 ACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC-TCCTCATCGCCGTG 155983
| ||| | ||||| || ||||| | ||| | || || |||| || || | ||||||
Sbjct 1633257 AGATCCGGGGTCCAAAGGGCGTAGAACAAGTCACGTG-CTCTGACTTCTTCCTTGCCGTG 1633315
Query 155984 ATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGC 156043
||||| || || | || || || | |||| || ||| || || || || ||
Sbjct 1633316 GTTCTTTCGCAGGTTCAAAAAGTCAAAGACGTCAGCGTGCCATGGTTCAAGGTAGATGGC 1633375
Query 156044 AAAACTACC---ATTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGAC 156100
|||| ||| | | | |||||||| || || ||||| || || || || ||||| ||
Sbjct 1633376 AAAAGCACCTGGACGCTTGTTGCCACCTTGGTCGACATATCGGGCGGTGTTGTTGAAAAC 1633435
Query 156101 ACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGA 156160
|| ||||| ||||| | ||| ||||| || |||||||| ||| ||| | ||||| |
Sbjct 1633436 ACGCAGCATGGGAATGAGACCGTTGGAGGTACCATTGGTGCCGGCAATGTAAGAACCGGT 1633495
Query 156161 TGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCA 156220
|| || | ||| || |||||||| || || | || || || || ||
Sbjct 1633496 TGCCCGGATGCAGTGAGCATTGAGTCCAATGCCGCCAGCAGTCTTGGAGATCATGGCACA 1633555
Query 156221 TTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT-TGATAGTAGATAGC 156279
||| | ||| | | | ||||| ||||| ||| || | ||| | | ||| |||
Sbjct 1633556 GATCTTGAGAGTGTCGTAGATACCCTCAATGCTATCTTCCTTCATGTCAATCAAGA-AGC 1633614
Query 156280 ACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAA 156339
| || | ||| | | | ||||| || |||||||| || || || | || || |||
Sbjct 1633615 ATGAGGACAGTTGGGCTTGAGGTGTGCCGGCGTTGAAGAGAGTCGGGGAAGCGTGTGTAA 1633674
Query 156340 AATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAA 156399
|| |||| | |||||| | ||| |||| || |||||| | || ||||| |
Sbjct 1633675 AACACTTCTGAGACATGAGGTTGTACGTCTGAATAGCCTTCTCGACATCGTCGCCGTGGA 1633734
Query 156400 TACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTC 156439
| | | || || | ||| ||||||||| || || ||
Sbjct 1633735 TGCCAACGGACACACGCATGAGCATATGCTGTGGTCGTTC 1633774
>seq5
Length=4186638
Score = 91.5 bits (100), Expect = 4e-13
Identities = 123/169 (73%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466
|| || ||||| | | || || ||||| ||| | | ||| || |||| | |||||
Sbjct 2158302 ATGAGGCCACAGATGTCGCAGACGTGGACTCTGAAGGGATCCGAGACGTCGAAGAGCCGC 2158243
Query 251467 CCCTTGGTGAAGCGAG-ATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAA 251525
|||| ||| |||| | |||||||| | |||||| || || || ||||||||||||||
Sbjct 2158242 TCCTTCAAGAA-CGAGGACGCACCGTGCGCAATCATGCAGTCTCGTTCCATTTCACCGAA 2158184
Query 251526 ACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGA 251574
|| ||||||||||| | || | ||| ||| |||| || || || |||
Sbjct 2158183 TCGGAGACCACCATCTCTGGCACGACCTTCGACAGGTTGGCGGGTCAGA 2158135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816902266469
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |