Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq6 136 5e-26
seq1 122 1e-21
seq2 116 5e-20
>seq6
Length=1840879
Score = 136 bits (150), Expect = 5e-26
Identities = 183/248 (74%), Gaps = 10/248 (4%)
Strand=Plus/Minus
Query 868693 CTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAA 868752
||||| ||| ||||| || || |||||| || |||||||||||| ||||||||||
Sbjct 490992 CTTGGAGTAGTCGCCGACACGTTTCTCGAAGAAATTGGTCTTGCCCGCGAGCGAGATGTT 490933
Query 868753 CTCCATCCACGGGAACGGGTT--GGGCGTCTTGTAGT---GCTTTTCGCATCCGAGCGAC 868807
|||||| | ||||| ||||| |||||| ||||| |||| | || | | ||||
Sbjct 490932 CTCCATGAAGGGGAAGGGGTTCTGGGCGT--TGTAGACGCGCTTGTTGCC-CAGGGCGA- 490877
Query 868808 GCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCG 868867
|| ||||||||||||||||| |||||||||||||| ||| || ||||||||| ||
Sbjct 490876 GC-AGCAGGCGGTCGGCGACGAACTCGATGTACTGTTGCATCAGCTTGGCGTTCATTCCC 490818
Query 868868 ATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACG 868927
| || | || || || | ||| ||| || || |||||||| | ||||| ||| |
Sbjct 490817 AACAGGCCGACGGGAAGAGCATCGGTCAGGAATTCCTTCTCGATGCCCACGGCTTCGGTG 490758
Query 868928 ATGATCTG 868935
||||| ||
Sbjct 490757 ATGATGTG 490750
Score = 109 bits (120), Expect = 7e-18
Identities = 190/272 (70%), Gaps = 11/272 (4%)
Strand=Plus/Minus
Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239
|| |||||||| ||| | ||| ||| |||| ||||||||||| || || ||
Sbjct 490679 CCCTCGTCGCGCGAGATGAGTTCATTGGAGAAGGTCAGGCCGGGCATCAGACCCTTGCTC 490620
Query 869240 TTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
|| ||||| ||||||| ||| |||| ||| ||||| || || |||||||||||||| ||
Sbjct 490619 TTCAGCCAGAAGATGGACGC-GAAAGAGCCGGAGAAGAAAATACCCTCGACGGCGGCGAA 490561
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGC 869355
| | ||| || | ||| ||| || || |||||||| ||||||||||| ||
Sbjct 490560 CGCCACGAGTCGTTGGGCGAAGCTG--GA----CTCCTTGTCCGAGATCCACTTCAATGC 490507
Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 869415
||| ||||| || || | | | || | |||||| ||||| |||||| | | |||
Sbjct 490506 CCAATCGGCTTTCTTGCGGATGCAGGGAATCGTGTCAATGGCATCAAAGAGATACTGCTT 490447
Query 869416 TTCGGCCGGGTCCTTGACATAGGTGTCGATCA 869447
| ||||| |||| || ||||| ||||
Sbjct 490446 CTGTTTGGGGTCGTTGATGTACGTGTCAATCA 490415
>seq1
Length=8684298
Score = 122 bits (134), Expect = 1e-21
Identities = 105/130 (81%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 1592171 TTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGC 1592230
|| ||| | ||||| ||||||||||| ||||||||||| | || || || | || |||
Sbjct 2323738 TTCGAGATCATCCTAGCCGCCAACTATCTCGACATCAAAGCACTTCTTGACGTCGGCTGC 2323679
Query 1592231 AAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAAC 1592290
||| | || || ||||||||||| |||||||| || |||||||| ||||||||||| |||
Sbjct 2323678 AAGACGGTTGCAAACATGATCAAAGGCAAGTCACCGGAGGAGATTCGCAAGACCTTCAAC 2323619
Query 1592291 ATCAAGTACG 1592300
||| || |||
Sbjct 2323618 ATCCAGAACG 2323609
>seq2
Length=8083196
Score = 116 bits (128), Expect = 5e-20
Identities = 180/257 (70%), Gaps = 0/257 (0%)
Strand=Plus/Plus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
|||||||| || || || |||| ||| || || || |||||||| | ||| ||||||||
Sbjct 1633404 TGGTCGACATATCGGGCGGTGTTGTTGAAAACACGCAGCATGGGAATGAGACCGTTGGAG 1633463
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185
|| |||||||| || | ||| | |||| || || | ||| || | ||
Sbjct 1633464 GTACCATTGGTGCCGGCAATGTAAGAACCGGTTGCCCGGATGCAGTGAGCATTGAGTCCA 1633523
Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245
|||||||| || | ||||||||| | || || ||||| ||||||||||| |||||
Sbjct 1633524 ATGCCGCCAGCAGTCTTGGAGATCATGGCACAGATCTTGAGAGTGTCGTAGATACCCTCA 1633583
Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305
|| || |||||||||| | | ||||| || || ||| | || | ||||||
Sbjct 1633584 ATGCTATCTTCCTTCATGTCAATCAAGAAGCATGAGGACAGTTGGGCTTGAGGTGTGCCG 1633643
Query 1630306 GCGTTGAAGAGCGTGGG 1630322
||||||||||| || ||
Sbjct 1633644 GCGTTGAAGAGAGTCGG 1633660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107136163606729
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |