Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq6 136 5e-26 seq1 122 1e-21 seq2 116 5e-20 >seq6 Length=1840879 Score = 136 bits (150), Expect = 5e-26 Identities = 183/248 (74%), Gaps = 10/248 (4%) Strand=Plus/Minus Query 868693 CTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAA 868752 ||||| ||| ||||| || || |||||| || |||||||||||| |||||||||| Sbjct 490992 CTTGGAGTAGTCGCCGACACGTTTCTCGAAGAAATTGGTCTTGCCCGCGAGCGAGATGTT 490933 Query 868753 CTCCATCCACGGGAACGGGTT--GGGCGTCTTGTAGT---GCTTTTCGCATCCGAGCGAC 868807 |||||| | ||||| ||||| |||||| ||||| |||| | || | | |||| Sbjct 490932 CTCCATGAAGGGGAAGGGGTTCTGGGCGT--TGTAGACGCGCTTGTTGCC-CAGGGCGA- 490877 Query 868808 GCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCG 868867 || ||||||||||||||||| |||||||||||||| ||| || ||||||||| || Sbjct 490876 GC-AGCAGGCGGTCGGCGACGAACTCGATGTACTGTTGCATCAGCTTGGCGTTCATTCCC 490818 Query 868868 ATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACG 868927 | || | || || || | ||| ||| || || |||||||| | ||||| ||| | Sbjct 490817 AACAGGCCGACGGGAAGAGCATCGGTCAGGAATTCCTTCTCGATGCCCACGGCTTCGGTG 490758 Query 868928 ATGATCTG 868935 ||||| || Sbjct 490757 ATGATGTG 490750 Score = 109 bits (120), Expect = 7e-18 Identities = 190/272 (70%), Gaps = 11/272 (4%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||| | ||| ||| |||| ||||||||||| || || || Sbjct 490679 CCCTCGTCGCGCGAGATGAGTTCATTGGAGAAGGTCAGGCCGGGCATCAGACCCTTGCTC 490620 Query 869240 TTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 || ||||| ||||||| ||| |||| ||| ||||| || || |||||||||||||| || Sbjct 490619 TTCAGCCAGAAGATGGACGC-GAAAGAGCCGGAGAAGAAAATACCCTCGACGGCGGCGAA 490561 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGC 869355 | | ||| || | ||| ||| || || |||||||| ||||||||||| || Sbjct 490560 CGCCACGAGTCGTTGGGCGAAGCTG--GA----CTCCTTGTCCGAGATCCACTTCAATGC 490507 Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 869415 ||| ||||| || || | | | || | |||||| ||||| |||||| | | ||| Sbjct 490506 CCAATCGGCTTTCTTGCGGATGCAGGGAATCGTGTCAATGGCATCAAAGAGATACTGCTT 490447 Query 869416 TTCGGCCGGGTCCTTGACATAGGTGTCGATCA 869447 | ||||| |||| || ||||| |||| Sbjct 490446 CTGTTTGGGGTCGTTGATGTACGTGTCAATCA 490415 >seq1 Length=8684298 Score = 122 bits (134), Expect = 1e-21 Identities = 105/130 (81%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 1592171 TTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGC 1592230 || ||| | ||||| ||||||||||| ||||||||||| | || || || | || ||| Sbjct 2323738 TTCGAGATCATCCTAGCCGCCAACTATCTCGACATCAAAGCACTTCTTGACGTCGGCTGC 2323679 Query 1592231 AAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAAC 1592290 ||| | || || ||||||||||| |||||||| || |||||||| ||||||||||| ||| Sbjct 2323678 AAGACGGTTGCAAACATGATCAAAGGCAAGTCACCGGAGGAGATTCGCAAGACCTTCAAC 2323619 Query 1592291 ATCAAGTACG 1592300 ||| || ||| Sbjct 2323618 ATCCAGAACG 2323609 >seq2 Length=8083196 Score = 116 bits (128), Expect = 5e-20 Identities = 180/257 (70%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 |||||||| || || || |||| ||| || || || |||||||| | ||| |||||||| Sbjct 1633404 TGGTCGACATATCGGGCGGTGTTGTTGAAAACACGCAGCATGGGAATGAGACCGTTGGAG 1633463 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 || |||||||| || | ||| | |||| || || | ||| || | || Sbjct 1633464 GTACCATTGGTGCCGGCAATGTAAGAACCGGTTGCCCGGATGCAGTGAGCATTGAGTCCA 1633523 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 |||||||| || | ||||||||| | || || ||||| ||||||||||| ||||| Sbjct 1633524 ATGCCGCCAGCAGTCTTGGAGATCATGGCACAGATCTTGAGAGTGTCGTAGATACCCTCA 1633583 Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305 || || |||||||||| | | ||||| || || ||| | || | |||||| Sbjct 1633584 ATGCTATCTTCCTTCATGTCAATCAAGAAGCATGAGGACAGTTGGGCTTGAGGTGTGCCG 1633643 Query 1630306 GCGTTGAAGAGCGTGGG 1630322 ||||||||||| || || Sbjct 1633644 GCGTTGAAGAGAGTCGG 1633660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107136163606729