Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2 168 6e-37 seq4 109 5e-19 >seq2 Length=8083196 Score = 168 bits (186), Expect = 6e-37 Identities = 613/940 (65%), Gaps = 31/940 (3%) Strand=Plus/Plus Query 139084 GAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACAC 139143 ||||| | ||||| || || || || || || || ||||||||||||| || | ||| Sbjct 1632924 GAGGCAAGATTGCAGACTGCAACCTCATCAGGTGCGGTGTATTCGACAATCTCTGTGCAC 1632983 Query 139144 AAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCT 139203 || || || | ||| || || | ||| | || ||||| || ||| || ||||| Sbjct 1632984 AAGTTGGAACTCCGGATTGTTCCCAGATTCTTCTGGTTGCTCTTCTTGTTGCACGCATCC 1633043 Query 139204 TTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAG 139263 || |||||||| || || || ||||| || ||| | ||| | |||| | ||| Sbjct 1633044 TTATAAAGCATGTATGGCGTCCCAGTCTCGGTTTGAGACTCGAGAATGGCATACCACAGC 1633103 Query 139264 TCCCTAGCTTGTATT---TGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGT 139320 | | || | || || || || | || | || ||||||||| ||||||||| Sbjct 1633104 TTCTGGGCCTTGATGGTCTGTCG-ACCTC--GTCCTTCCTTCTCGTACTTCTCGTAGAGT 1633160 Query 139321 TCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAG 139379 | ||||| |||| |||||||| | |||| |||| | | || || || || | ||| Sbjct 1633161 GCCTCGAACTCGT-CACCGTAGACATCAGCAAGACCAGGGGCCTCGTGTGGGCAGAAGAG 1633219 Query 139380 CGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAA 139439 | ||| | ||| || || ||| |||||| |||||||| |||| | ||| | Sbjct 1633220 TGTCCAGTCTTGATTCTTCTCAACACGCTGCATGAAGAGATCCGGGGTCCAAAGGGCGTA 1633279 Query 139440 CAGCAAATCGCGCGCCTTCTTA--TCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAA 139497 | ||| || || || ||| | |||||| || ||| | || ||| | || Sbjct 1633280 GAACAAGTCACGTGC--TCTGACTTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAAAAG 1633337 Query 139498 TCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTG 139554 ||||| |||||||||||||||||||| || |||||||| | || ||| || ||| Sbjct 1633338 TCAAAGACGTCAGCGTGCCATGGTTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTG 1633397 Query 139555 CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCG 139614 |||||||| ||||| | ||| | | || ||||| || |||| ||| || |||||| Sbjct 1633398 CCACCTTGGTCGACATATCGGGCGGTGTTGTTGAAAACACGCAGCATGGGAATGAGACCG 1633457 Query 139615 CTCGCTGTTCCGTTGGTGCTACGG--ATG---GGACTGTTGCGAGCTCGGACGTCATGTA 139669 | | || || ||||||| ||| ||| | || | | || |||| | || Sbjct 1633458 TTGGAGGTACCATTGGTGC--CGGCAATGTAAGAACCGGT---TGCCCGGATGCAGTGAG 1633512 Query 139670 CATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA-ATCGCGTAATGTCTCG 139728 |||||| || || ||||| || ||||| || | | || ||| | | || ||| Sbjct 1633513 CATTGAGTCCAATGCCGCCAGCAGTCTTGGAGATCATGGCACAGATCTTG-AGAGTGTCG 1633571 Query 139729 TATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGT 139788 || ||||| ||||| || |||| ||| | || |||||||| || ||||| | | Sbjct 1633572 TAGATACCCTCAATGCTATCTTCCTTCATGTCAATCAAGAAGCATGAGGACAGTTGGGCT 1633631 Query 139789 AGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGT-GAACATTTGTTTCGACAT 139847 | |||||||| || ||||| || ||||| || |||| || | ||||| Sbjct 1633632 TGAGGTGTGCCGGCGTTGAAGAGAGTCGGGGAAGCGTGTGTAAAACACTT-CTGAGACAT 1633690 Query 139848 CAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCG 139907 | | |||||| | || || || | | ||| |||||||| || || || || || Sbjct 1633691 GAGGTTGTACGTCTGAATAGCCTTCTCGACATCGTCGCCGTGGATGCCAACGGACACACG 1633750 Query 139908 CATCAGCATATGTTGGATCCGTTCGGCCAC-CGCGCCCTCGAtttttttCAGATAACCGT 139966 ||| |||||||| || ||||| || || || | | || || ||| || Sbjct 1633751 CATGAGCATATGCTGTGGTCGTTCCGCAACTTGCTTGC-CAATCTTGAGCAGGTATGATC 1633809 Query 139967 TCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 | || || |||||| |||||||||| |||||||| || Sbjct 1633810 TTTCCAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTC 1633849 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 ||||| || || ||||| || || || ||| ||| |||||| || || | || || Sbjct 3687922 ACCGGCAAGACCATTACACTTGAGGTCGAATCCAGCGACACTGTCGACAATGTCAAGTCT 3687863 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||||||||| || || || || || || ||||||||||| |||||||| || || || Sbjct 3687862 AAGATCCAAGATAAGGAGGGCATCCCACCAGATCAACAACGGTTGATCTTCGCAGGAAAG 3687803 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || | |||||| |||| | || || ||| | ||||||||||| || || || ||| Sbjct 3687802 CAATTAGAGGATGGTAGAACTCTTTCCGACTATGATATTCAAAAGGAGTCAACCCTGCAC 3687743 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 | ||| | ||||||| || || Sbjct 3687742 CTTGTGCTTAGATTGCGAGGTGG 3687720 >seq4 Length=4536433 Score = 109 bits (120), Expect = 5e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 ||||| || || || |||||||| || ||| | | |||||| | || | || ||| Sbjct 671871 ACCGGAAAGACCATCACGCTCGAGGTCGAATCGAGCGACACCATTGACAATGTCAAATCC 671812 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||| ||||| ||||| || |||||||| || || || ||||||| ||||| || Sbjct 671811 AAGATCCAGGACAAGGAAGGCATTCCTCCCGACCAGCAGCGCCTGATCTTCGCCGGAAAG 671752 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || || || || | | | || || || ||||| ||||||||||| || |||||| Sbjct 671751 CAACTTGAAGACGGCCGCACCTTGAGCGACTACAACATCCAAAAGGAATCTACTCTACAC 671692 Query 24908 TTGGT 24912 ||||| Sbjct 671691 TTGGT 671687 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || | ||||| || || | Sbjct 671211 ATGCAGATCTTTGTCAAGACTCTGACTGGAAAGACGATCACTTTAGAAGTGGAGTCCTCG 671152 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| ||||| || || || || ||| Sbjct 671151 GACACCATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCAA 671092 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||||||||| || || |||||||| | | | || || || ||| Sbjct 671091 CAGCGATTGATCTTTGCCGGCAAGCAATTGGAGGATGGCCGCACTCTATCTGACTACAAC 671032 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||| || || ||||||||| || || | ||||| || Sbjct 671031 ATTCAGAAGGAGAGCACCCTCCACTTGGTGCTGAGACTTCGCGGTGG 670985 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || ||||| ||||| || || || || |||||| | | Sbjct 671439 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAAACCATCACCCTGGATGTAGAATCGTCA 671380 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||||||||||| || || || || || || ||| Sbjct 671379 GACACTATTGACAACGTGAAATCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAA 671320 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| |||||||| || || || || || || || ||| | || || || ||| Sbjct 671319 CAACGATTGATCTTCGCAGGCAAGCAACTCGAAGACGGCCGAACTCTTTCCGACTACAAC 671260 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || |||||||| || || || |||| Sbjct 671259 ATCCAGAAGGAATCCACTCTTCATCTGGT 671231 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || ||||| || || ||||||||||| || ||| | | | Sbjct 671667 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATTACGCTCGAGGTCGAATCGAGC 671608 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| ||||| |||||||| ||||| || |||||||| || Sbjct 671607 GATACCATCGACAACGTCAAATCCAAGATTCAAGACAAGGAAGGCATTCCTCCCGACCAG 671548 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || || || || || | | | || ||||| ||| Sbjct 671547 CAGCGCCTGATCTTCGCCGGAAAGCAACTTGAAGACGGCCGCACCTTGAGCGATTACAAC 671488 Query 24884 ATTCAAAAGGAATCGAC 24900 || || || ||||| || Sbjct 671487 ATCCAGAAAGAATCCAC 671471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897391922360