Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq6 131 3e-24 seq1 113 7e-19 seq2 104 4e-16 seq3 89.7 8e-12 >seq6 Length=1840879 Score = 131 bits (144), Expect = 3e-24 Identities = 187/257 (73%), Gaps = 10/257 (4%) Strand=Plus/Minus Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951 ||| || | ||||| || ||||| || || |||||| || |||||||||||| |||| Sbjct 491001 GACTCCGGTCTTGGAGTAGTCGCCGACACGTTTCTCGAAGAAATTGGTCTTGCCCGCGAG 490942 Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTT--GGCCGTCAGGTAGT---GCTTCTCGCAC 794006 |||||| |||||| | ||||| ||||| || ||| |||| |||| | || | Sbjct 490941 CGAGATGTTCTCCATGAAGGGGAAGGGGTTCTGGGCGTT--GTAGACGCGCTTGTTGC-C 490885 Query 794007 CCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCG 794066 | | |||| ||| ||||||||||||||||||| || |||||||| ||| || |||| Sbjct 490884 CAGGGCGA-GCA-GCAGGCGGTCGGCGACGAACTCGATGTACTGTTGCATCAGCTTGGCG 490827 Query 794067 TTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACG 794126 ||||| || | || | ||||| || | ||| | | || || |||||||| | ||| Sbjct 490826 TTCATTCCCAACAGGCCGACGGGAAGAGCATCGGTCAGGAATTCCTTCTCGATGCCCACG 490767 Query 794127 GCCTCGATGATGATCTG 794143 || ||| ||||||| || Sbjct 490766 GCTTCGGTGATGATGTG 490750 Score = 113 bits (124), Expect = 7e-19 Identities = 208/305 (68%), Gaps = 9/305 (3%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| ||| | ||| ||| ||| ||||||||||| || || || Sbjct 490679 CCCTCGTCGCGCGAGATGAGTTCATTGGAGAAGGTCAGGCCGGGCATCAGACCCTTGCTC 490620 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||| ||||||| |||| ||| ||||| || || |||||||||||||| || Sbjct 490619 TTCAGCCAGAAGATGGACGCGAAAGAGCCGGAGAAGAAAATACCCTCGACGGCGGCGAAC 490560 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGT---TGATCCACTTCATCGCC 794517 | ||||| || | ||| || | | ||| |||| ||||||||||| ||| Sbjct 490559 GCCACGAGTCGTTGGGCGAAGCT------GGACTCCTTGTCCGAGATCCACTTCAATGCC 490506 Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTC 794577 || || || || || | | |||| | |||||| ||||| |||||| | | |||| Sbjct 490505 CAATCGGCTTTCTTGCGGATGCAGGGAATCGTGTCAATGGCATCAAAGAGATACTGCTTC 490446 Query 794578 TCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTT 794637 | ||||| |||| ||| ||||| || | || ||| |||| ||||||||||| Sbjct 490445 TGTTTGGGGTCGTTGATGTACGTGTCAATCAAAAGACTGTACATCTCCGAGTGGATGTTC 490386 Query 794638 TCGAT 794642 || || Sbjct 490385 TCAAT 490381 >seq1 Length=8684298 Score = 113 bits (124), Expect = 7e-19 Identities = 103/130 (79%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 2035632 TTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGC 2035691 || ||| | ||||| ||||||||||| ||||||||||| | || || || | || ||| Sbjct 2323738 TTCGAGATCATCCTAGCCGCCAACTATCTCGACATCAAAGCACTTCTTGACGTCGGCTGC 2323679 Query 2035692 AAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAAC 2035751 ||||| || || ||| | ||||| |||||||| || ||||| || ||||||||||| ||| Sbjct 2323678 AAGACGGTTGCAAACATGATCAAAGGCAAGTCACCGGAGGAGATTCGCAAGACCTTCAAC 2323619 Query 2035752 ATCAAGTACG 2035761 ||| || ||| Sbjct 2323618 ATCCAGAACG 2323609 Score = 104 bits (114), Expect = 4e-16 Identities = 390/604 (65%), Gaps = 11/604 (2%) Strand=Plus/Minus Query 2411376 ATCGTCGAGATCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAG 2411435 |||| || ||| || ||||| ||| ||| || |||||||||| | || || Sbjct 3681226 ATCGAGGATATCGATTTTGGAATCGGGGTCGGACGCCGACATCTTGCCGCC---GGCAAG 3681170 Query 2411436 GCCCGGCACCAGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTG 2411495 ||||| |||| ||||| | ||||||| || | |||||||| | | ||| ||| Sbjct 3681169 ACCCGGTACCATGGGGTTCATCAGGTGGGCTCGTTCTCGGTAGCCAATCTTCGGAAGGGT 3681110 Query 2411496 GTCGCGCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTC 2411555 || | || | ||||||||||| ||||| || ||||||||||| || || || | Sbjct 3681109 TTCCTGTGCGAGAGCAAAGATCTTCCGCTGATCCACGCCGCCAAACTGTGCATCAACACC 3681050 Query 2411556 GAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTT 2411615 || |||| |||||| | || ||||| || || |||| | | ||| |||| || Sbjct 3681049 CAGATGCTCCTCGTCCAACGCTTGCATCAGAGGATAGATTAATCCGGAGAGGGGCGCATT 3680990 Query 2411616 GCGGTCCATCTTGACCACCTGGGCGGCGGCCTTTT--GCGCCGTGCCGACGGTCACGCGC 2411673 || |||||| |||| || ||||||||| ||| | ||| |||| || | | Sbjct 3680989 TTCCACCTGCTTGACGACCTCTGCCCCGGCCTTTTTGGCGTCATGC--TCGGTGAC-CAC 3680933 Query 2411674 GCCG-TCAGGCGCAAGAGGTCGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCG 2411732 || | ||| || |||| || | ||||| | |||| | ||||| ||| | Sbjct 3680932 GCTGCTCAACCGGAAGATATCCATGGTGTATTCCGCGCTCAGTTGGTAGGACGAGCCCAG 3680873 Query 2411733 CACAAATTCGAGACGATCCAGCGGGACGCCAATGTGCTGGAGCATGGCCTTGATGGCAAA 2411792 || || || || ||||| || |||| || ||| | || || ||| ||| Sbjct 3680872 GACGAACTCCAGCTTCTCCAGGCTCACTCCAACCGCCTTGAGGAGGGACTGGATAATAAA 3680813 Query 2411793 CTCGTACCA-GCGGCACCGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGT 2411851 || ||| | |||| ||| || ||| || || |||| |||| || |||||| Sbjct 3680812 CTTGTAGTATTCGGC-GCGGAACTTGACCAGTTCGATGGGCGCCTTGAGGTTATCGAGGA 3680754 Query 2411852 GGGCGTGCACGTCGGCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCA 2411911 | || | ||| || | |||||| | || || || |||||| | || || | || | Sbjct 3680753 AACCATGAATGTCCGCCAGGAGGATTTTGACTCGGCAACCGGCCCGTAGGAAATGTGCAA 3680694 Query 2411912 GTTTAAAGATGGGCACAAAGTAGCCCAGATGGGGCTTGCCCGTCGGCGCGGTGCCCCAAT 2411971 || | || |||||||||||||| ||| ||| || |||| ||| || ||||| | Sbjct 3680693 TCTTCATCATTGGCACAAAGTAGCCGCAATGAGGCCGTCCGGTCGTCGCTGTCCCCCAGT 3680634 Query 2411972 AAAT 2411975 | || Sbjct 3680633 AGAT 3680630 >seq2 Length=8083196 Score = 104 bits (114), Expect = 4e-16 Identities = 177/257 (69%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 ||||||||||| || || |||| ||| || || || |||||||| | || |||||||| Sbjct 1633404 TGGTCGACATATCGGGCGGTGTTGTTGAAAACACGCAGCATGGGAATGAGACCGTTGGAG 1633463 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 || |||||||| || | ||| | || | || || | ||| || | || Sbjct 1633464 GTACCATTGGTGCCGGCAATGTAAGAACCGGTTGCCCGGATGCAGTGAGCATTGAGTCCA 1633523 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 |||||||| || | ||||||||| | || || | || || || |||||||| ||||| Sbjct 1633524 ATGCCGCCAGCAGTCTTGGAGATCATGGCACAGATCTTGAGAGTGTCGTAGATACCCTCA 1633583 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || || |||||||||| | || ||||| || || ||| | | | |||||| Sbjct 1633584 ATGCTATCTTCCTTCATGTCAATCAAGAAGCATGAGGACAGTTGGGCTTGAGGTGTGCCG 1633643 Query 2073781 GCATTGAAGAGCGTGGG 2073797 || |||||||| || || Sbjct 1633644 GCGTTGAAGAGAGTCGG 1633660 >seq3 Length=7540789 Score = 89.7 bits (98), Expect = 8e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||||||||| || ||||| || ||||||||| |||| || || || ||| Sbjct 3043529 GTACTTGGTGACGGCCTTTGTGCCCTCAGACACGGCGTGCTTGGCAAGCTCACCAGGCAG 3043588 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||| || || || | ||||||||| ||||||| Sbjct 3043589 GATGAGTCGGACAGAGGTCTGGATTTCGCGGG 3043620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916242464141243