Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq6 131 3e-24
seq1 113 7e-19
seq2 104 4e-16
seq3 89.7 8e-12
>seq6
Length=1840879
Score = 131 bits (144), Expect = 3e-24
Identities = 187/257 (73%), Gaps = 10/257 (4%)
Strand=Plus/Minus
Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951
||| || | ||||| || ||||| || || |||||| || |||||||||||| ||||
Sbjct 491001 GACTCCGGTCTTGGAGTAGTCGCCGACACGTTTCTCGAAGAAATTGGTCTTGCCCGCGAG 490942
Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTT--GGCCGTCAGGTAGT---GCTTCTCGCAC 794006
|||||| |||||| | ||||| ||||| || ||| |||| |||| | || |
Sbjct 490941 CGAGATGTTCTCCATGAAGGGGAAGGGGTTCTGGGCGTT--GTAGACGCGCTTGTTGC-C 490885
Query 794007 CCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCG 794066
| | |||| ||| ||||||||||||||||||| || |||||||| ||| || ||||
Sbjct 490884 CAGGGCGA-GCA-GCAGGCGGTCGGCGACGAACTCGATGTACTGTTGCATCAGCTTGGCG 490827
Query 794067 TTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACG 794126
||||| || | || | ||||| || | ||| | | || || |||||||| | |||
Sbjct 490826 TTCATTCCCAACAGGCCGACGGGAAGAGCATCGGTCAGGAATTCCTTCTCGATGCCCACG 490767
Query 794127 GCCTCGATGATGATCTG 794143
|| ||| ||||||| ||
Sbjct 490766 GCTTCGGTGATGATGTG 490750
Score = 113 bits (124), Expect = 7e-19
Identities = 208/305 (68%), Gaps = 9/305 (3%)
Strand=Plus/Minus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| |||||||| ||| | ||| ||| ||| ||||||||||| || || ||
Sbjct 490679 CCCTCGTCGCGCGAGATGAGTTCATTGGAGAAGGTCAGGCCGGGCATCAGACCCTTGCTC 490620
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
|| ||||| ||||||| |||| ||| ||||| || || |||||||||||||| ||
Sbjct 490619 TTCAGCCAGAAGATGGACGCGAAAGAGCCGGAGAAGAAAATACCCTCGACGGCGGCGAAC 490560
Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGT---TGATCCACTTCATCGCC 794517
| ||||| || | ||| || | | ||| |||| ||||||||||| |||
Sbjct 490559 GCCACGAGTCGTTGGGCGAAGCT------GGACTCCTTGTCCGAGATCCACTTCAATGCC 490506
Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTC 794577
|| || || || || | | |||| | |||||| ||||| |||||| | | ||||
Sbjct 490505 CAATCGGCTTTCTTGCGGATGCAGGGAATCGTGTCAATGGCATCAAAGAGATACTGCTTC 490446
Query 794578 TCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTT 794637
| ||||| |||| ||| ||||| || | || ||| |||| |||||||||||
Sbjct 490445 TGTTTGGGGTCGTTGATGTACGTGTCAATCAAAAGACTGTACATCTCCGAGTGGATGTTC 490386
Query 794638 TCGAT 794642
|| ||
Sbjct 490385 TCAAT 490381
>seq1
Length=8684298
Score = 113 bits (124), Expect = 7e-19
Identities = 103/130 (79%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 2035632 TTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGC 2035691
|| ||| | ||||| ||||||||||| ||||||||||| | || || || | || |||
Sbjct 2323738 TTCGAGATCATCCTAGCCGCCAACTATCTCGACATCAAAGCACTTCTTGACGTCGGCTGC 2323679
Query 2035692 AAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAAC 2035751
||||| || || ||| | ||||| |||||||| || ||||| || ||||||||||| |||
Sbjct 2323678 AAGACGGTTGCAAACATGATCAAAGGCAAGTCACCGGAGGAGATTCGCAAGACCTTCAAC 2323619
Query 2035752 ATCAAGTACG 2035761
||| || |||
Sbjct 2323618 ATCCAGAACG 2323609
Score = 104 bits (114), Expect = 4e-16
Identities = 390/604 (65%), Gaps = 11/604 (2%)
Strand=Plus/Minus
Query 2411376 ATCGTCGAGATCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAG 2411435
|||| || ||| || ||||| ||| ||| || |||||||||| | || ||
Sbjct 3681226 ATCGAGGATATCGATTTTGGAATCGGGGTCGGACGCCGACATCTTGCCGCC---GGCAAG 3681170
Query 2411436 GCCCGGCACCAGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTG 2411495
||||| |||| ||||| | ||||||| || | |||||||| | | ||| |||
Sbjct 3681169 ACCCGGTACCATGGGGTTCATCAGGTGGGCTCGTTCTCGGTAGCCAATCTTCGGAAGGGT 3681110
Query 2411496 GTCGCGCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTC 2411555
|| | || | ||||||||||| ||||| || ||||||||||| || || || |
Sbjct 3681109 TTCCTGTGCGAGAGCAAAGATCTTCCGCTGATCCACGCCGCCAAACTGTGCATCAACACC 3681050
Query 2411556 GAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTT 2411615
|| |||| |||||| | || ||||| || || |||| | | ||| |||| ||
Sbjct 3681049 CAGATGCTCCTCGTCCAACGCTTGCATCAGAGGATAGATTAATCCGGAGAGGGGCGCATT 3680990
Query 2411616 GCGGTCCATCTTGACCACCTGGGCGGCGGCCTTTT--GCGCCGTGCCGACGGTCACGCGC 2411673
|| |||||| |||| || ||||||||| ||| | ||| |||| || | |
Sbjct 3680989 TTCCACCTGCTTGACGACCTCTGCCCCGGCCTTTTTGGCGTCATGC--TCGGTGAC-CAC 3680933
Query 2411674 GCCG-TCAGGCGCAAGAGGTCGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCG 2411732
|| | ||| || |||| || | ||||| | |||| | ||||| ||| |
Sbjct 3680932 GCTGCTCAACCGGAAGATATCCATGGTGTATTCCGCGCTCAGTTGGTAGGACGAGCCCAG 3680873
Query 2411733 CACAAATTCGAGACGATCCAGCGGGACGCCAATGTGCTGGAGCATGGCCTTGATGGCAAA 2411792
|| || || || ||||| || |||| || ||| | || || ||| |||
Sbjct 3680872 GACGAACTCCAGCTTCTCCAGGCTCACTCCAACCGCCTTGAGGAGGGACTGGATAATAAA 3680813
Query 2411793 CTCGTACCA-GCGGCACCGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGT 2411851
|| ||| | |||| ||| || ||| || || |||| |||| || ||||||
Sbjct 3680812 CTTGTAGTATTCGGC-GCGGAACTTGACCAGTTCGATGGGCGCCTTGAGGTTATCGAGGA 3680754
Query 2411852 GGGCGTGCACGTCGGCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCA 2411911
| || | ||| || | |||||| | || || || |||||| | || || | || |
Sbjct 3680753 AACCATGAATGTCCGCCAGGAGGATTTTGACTCGGCAACCGGCCCGTAGGAAATGTGCAA 3680694
Query 2411912 GTTTAAAGATGGGCACAAAGTAGCCCAGATGGGGCTTGCCCGTCGGCGCGGTGCCCCAAT 2411971
|| | || |||||||||||||| ||| ||| || |||| ||| || ||||| |
Sbjct 3680693 TCTTCATCATTGGCACAAAGTAGCCGCAATGAGGCCGTCCGGTCGTCGCTGTCCCCCAGT 3680634
Query 2411972 AAAT 2411975
| ||
Sbjct 3680633 AGAT 3680630
>seq2
Length=8083196
Score = 104 bits (114), Expect = 4e-16
Identities = 177/257 (69%), Gaps = 0/257 (0%)
Strand=Plus/Plus
Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600
||||||||||| || || |||| ||| || || || |||||||| | || ||||||||
Sbjct 1633404 TGGTCGACATATCGGGCGGTGTTGTTGAAAACACGCAGCATGGGAATGAGACCGTTGGAG 1633463
Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660
|| |||||||| || | ||| | || | || || | ||| || | ||
Sbjct 1633464 GTACCATTGGTGCCGGCAATGTAAGAACCGGTTGCCCGGATGCAGTGAGCATTGAGTCCA 1633523
Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720
|||||||| || | ||||||||| | || || | || || || |||||||| |||||
Sbjct 1633524 ATGCCGCCAGCAGTCTTGGAGATCATGGCACAGATCTTGAGAGTGTCGTAGATACCCTCA 1633583
Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780
|| || |||||||||| | || ||||| || || ||| | | | ||||||
Sbjct 1633584 ATGCTATCTTCCTTCATGTCAATCAAGAAGCATGAGGACAGTTGGGCTTGAGGTGTGCCG 1633643
Query 2073781 GCATTGAAGAGCGTGGG 2073797
|| |||||||| || ||
Sbjct 1633644 GCGTTGAAGAGAGTCGG 1633660
>seq3
Length=7540789
Score = 89.7 bits (98), Expect = 8e-12
Identities = 75/92 (82%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
|||||||||||||||||| || ||||| || ||||||||| |||| || || || |||
Sbjct 3043529 GTACTTGGTGACGGCCTTTGTGCCCTCAGACACGGCGTGCTTGGCAAGCTCACCAGGCAG 3043588
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562
||| || || || | ||||||||| |||||||
Sbjct 3043589 GATGAGTCGGACAGAGGTCTGGATTTCGCGGG 3043620
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916242464141243
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |