Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq4 145 5e-30 seq3 98.7 6e-16 seq2 89.7 3e-13 >seq4 Length=4536433 Score = 145 bits (160), Expect = 5e-30 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 ||||| |||| ||| | ||||||||||||||||||||| ||||| ||||| |||| || Sbjct 670997 CTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGATAGAGTGCGGCCA 671056 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || |||| |||||| ||||| ||||||| ||| || |||||| | || | || |||||| Sbjct 671057 TCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTG 671116 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || || |||||| | || | || || ||| || || | || || Sbjct 671117 TCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCACTTCTAAAGTGATC 671176 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||| || || ||||| |||||||||||||| Sbjct 671177 GTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 || || ||||| |||| ||| |||||||| ||||| ||||| || || | || | Sbjct 671225 CTGAGTACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCG 671284 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || || |||||||| || |||||||||| |||||| |||||| | || | ||||||||| Sbjct 671285 TCTTCGAGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGGGATACCCTCCTTG 671344 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || || ||| ||| | || | || | || ||||| | ||| ||| Sbjct 671345 TCTTGGATCTTGGATTTCACGTTGTCAATAGTGTCTGACGATTCTACATCCAGGGTGATG 671404 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || ||||| ||||| || ||||| |||||| Sbjct 671405 GTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCATG 671440 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 10/217 (5%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | |||| || ||||| ||||| || || | | |||| | || Sbjct 671456 AGGACGAGATGCAAGGTGGATTCTTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCGTCT 671515 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||||||||||||||||||||| || |||||||| | || | || |||||||| Sbjct 671516 TCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCT 671575 Query 34886 TTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940 | || || ||||||| |||| ||||| | || ||||| || | || | Sbjct 671576 TGAATCTTGGATTTGACGTTGTCGATGGTATCGCTCGAT-----TCGACCTCGAGCGTAA 671630 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||| || || || ||||| || ||||| ||||| Sbjct 671631 TGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 671667 >seq3 Length=7540789 Score = 98.7 bits (108), Expect = 6e-16 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | || ||||||||| ||||| ||||| || || | || | || Sbjct 3360412 AGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCT 3360353 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || |||||||| ||||||||||| || |||||||||||| |||| | || |||||||| Sbjct 3360352 TCGAGTTGCTTGCCGGCGAAGATGAGGCGTTGCTGGTCTGGCGGGATGCCTTCCTTGTC 3360294 >seq2 Length=8083196 Score = 89.7 bits (98), Expect = 3e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 |||| || ||||| ||||| | |||| |||| || |||||||| |||||||||| Sbjct 5300566 CCTTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGA 5300507 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 |||| || |||||||| | || | || |||||||| | || || || || Sbjct 5300506 TCAGGCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTAACATTGT 5300447 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | |||| || | |||||| |||| ||| |||||||| ||||| |||||||| || | Sbjct 5300446 CGATCGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 5300387 Query 34968 AG 34969 || Sbjct 5300386 AG 5300385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692653132903