Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq4 145 5e-30
seq3 98.7 6e-16
seq2 89.7 3e-13
>seq4
Length=4536433
Score = 145 bits (160), Expect = 5e-30
Identities = 161/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
||||| |||| ||| | ||||||||||||||||||||| ||||| ||||| |||| ||
Sbjct 670997 CTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGATAGAGTGCGGCCA 671056
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| |||| |||||| ||||| ||||||| ||| || |||||| | || | || ||||||
Sbjct 671057 TCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTG 671116
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || || |||||| | || | || || ||| || || | || ||
Sbjct 671117 TCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCACTTCTAAAGTGATC 671176
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||||| || || ||||| ||||||||||||||
Sbjct 671177 GTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
|| || ||||| |||| ||| |||||||| ||||| ||||| || || | || |
Sbjct 671225 CTGAGTACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCG 671284
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| || |||||||| || |||||||||| |||||| |||||| | || | |||||||||
Sbjct 671285 TCTTCGAGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGGGATACCCTCCTTG 671344
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || || ||| ||| | || | || | || ||||| | ||| |||
Sbjct 671345 TCTTGGATCTTGGATTTCACGTTGTCAATAGTGTCTGACGATTCTACATCCAGGGTGATG 671404
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || || ||||| ||||| || ||||| ||||||
Sbjct 671405 GTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCATG 671440
Score = 104 bits (114), Expect = 2e-17
Identities = 153/217 (71%), Gaps = 10/217 (5%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || || | |||| || ||||| ||||| || || | | |||| | ||
Sbjct 671456 AGGACGAGATGCAAGGTGGATTCTTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCGTCT 671515
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| ||||||||||||||||||||||| || |||||||| | || | || ||||||||
Sbjct 671516 TCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCT 671575
Query 34886 TTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940
| || || ||||||| |||| ||||| | || ||||| || | || |
Sbjct 671576 TGAATCTTGGATTTGACGTTGTCGATGGTATCGCTCGAT-----TCGACCTCGAGCGTAA 671630
Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||||| || || || ||||| || ||||| |||||
Sbjct 671631 TGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 671667
>seq3
Length=7540789
Score = 98.7 bits (108), Expect = 6e-16
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||| | || ||||||||| ||||| ||||| || || | || | ||
Sbjct 3360412 AGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCT 3360353
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| |||||||| ||||||||||| || |||||||||||| |||| | || ||||||||
Sbjct 3360352 TCGAGTTGCTTGCCGGCGAAGATGAGGCGTTGCTGGTCTGGCGGGATGCCTTCCTTGTC 3360294
>seq2
Length=8083196
Score = 89.7 bits (98), Expect = 3e-13
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
|||| || ||||| ||||| | |||| |||| || |||||||| ||||||||||
Sbjct 5300566 CCTTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGA 5300507
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
|||| || |||||||| | || | || |||||||| | || || || ||
Sbjct 5300506 TCAGGCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTAACATTGT 5300447
Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| |||| || | |||||| |||| ||| |||||||| ||||| |||||||| || |
Sbjct 5300446 CGATCGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 5300387
Query 34968 AG 34969
||
Sbjct 5300386 AG 5300385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692653132903
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |