Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq2 122 2e-22 seq4 114 3e-20 >seq2 Length=8083196 Score = 122 bits (134), Expect = 2e-22 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||| ||| | || || | |||||| || || || || || |||| ||| || | Sbjct 3687718 TACCACCTCGCAATCTAAGCACAAGGTGCAGGGTTGACTCCTTTTGAATATCATAGTCGG 3687777 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| ||||||| || |||| ||| ||||| || ||||| | | |||||||||||| | Sbjct 3687778 AAAGAGTTCTACCATCCTCTAATTGCTTTCCTGCGAAGATCAACCGTTGTTGATCTGGTG 3687837 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||||||||| ||||| | || ||||| || | || || | | ||| | Sbjct 3687838 GGATGCCCTCCTTATCTTGGATCTTAGACTTGACATTGTCGACAGTGTCGCTGGATTCGA 3687897 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGT 82786 | || | || || |||||||| || Sbjct 3687898 CCTCAAGTGTAATGGTCTTGCCGGT 3687922 >seq4 Length=4536433 Score = 114 bits (126), Expect = 3e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 |||| || ||||||||||| || || ||||| | | | |||||||| ||||| Sbjct 671465 TGCAAGGTGGATTCTTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCGTCTTCAAGTTGC 671524 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 ||||| || ||||| || | || || || ||||| || |||||||| ||||||||||| Sbjct 671525 TTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCTTGAATCTTG 671584 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 | ||| || || || || ||||| | | ||| || || | || || |||||||| || Sbjct 671585 GATTTGACGTTGTCGATGGTATCGCTCGATTCGACCTCGAGCGTAATGGTCTTGCCGGTA 671644 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | ||||| || || || ||||| Sbjct 671645 AGAGTCTTGACGAAGATTTGCAT 671667 Score = 104 bits (114), Expect = 5e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| ||||| ||||| ||||||||||| || || || || || || Sbjct 671667 TACCACCACGGAGACGGAGAACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGC 671726 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | |||||||| ||||| ||||| || ||||| || | || || || |||| Sbjct 671727 TCAAGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAG 671786 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| || || ||||| | ||| ||||| ||||| || || | | ||| | Sbjct 671787 GAATGCCTTCCTTGTCCTGGATCTTGGATTTGACATTGTCAATGGTGTCGCTCGATTCGA 671846 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGT 82786 | || | || || ||||| || || Sbjct 671847 CCTCGAGCGTGATGGTCTTTCCGGT 671871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826734552543