Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq4 105 2e-17 seq2 91.5 3e-13 >seq4 Length=4536433 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || || || ||||| ||||||||||| |||||||| || ||| Sbjct 671208 CAGATCTTTGTCAAGACTCTGACTGGAAAGACGATCACTTTAGAAGTGGAGTCCTCGGAC 671149 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| |||||||| || || ||||| ||| || ||| || Sbjct 671148 ACCATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCAACAG 671089 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||| ||||| ||||| ||||| ||||| | ||| | | || |||||| | Sbjct 671088 CGATTGATCTTTGCCGGCAAGCAATTGGAGGATGGCCGCACTCTATCTGACTACAACATT 671029 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||| || || ||| | || |||||||||| Sbjct 671028 CAGAAGGAGAGCACCCTCCACTTGGTGCTGAGACTTCG 670991 >seq2 Length=8083196 Score = 91.5 bits (100), Expect = 3e-13 Identities = 169/248 (68%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166 || ||||| || | ||| | ||| | ||| ||| | ||||| | | | |||| | | Sbjct 1633038 GCATCCTTATAAAGCATGTATGGCGTCCCAGTCTCGGTTTGAGACTCGAGAATGGCATAC 1633097 Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226 || || | ||||| || | ||| || ||| |||||| || ||||| |||| ||| Sbjct 1633098 CACAGCTTCTGGGCCTTGATGGTCTGTCGACCTCGTCCTTCCTTCTCGTACTTCTCGTAG 1633157 Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286 || | ||||| || | ||||| | || ||||||| || || || | || || ||| Sbjct 1633158 AGTGCCTCGAACTCGTCACCGTAGACATCAGCAAGACCAGGGGCCTCGTGTGGGCAGAAG 1633217 Query 173287 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 173346 || |||| | | || |||| || | || ||||||||| || | ||||||| ||| Sbjct 1633218 AGTGTCCAGTCTTGATTCTTCTCAACACGCTGCATGAAGAGATCCGGGGTCCAAAGGGCG 1633277 Query 173347 TAGAACAA 173354 |||||||| Sbjct 1633278 TAGAACAA 1633285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820239743077