Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq4 105 2e-17
seq2 91.5 3e-13
>seq4
Length=4536433
Score = 105 bits (116), Expect = 2e-17
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || || || ||||| ||||||||||| |||||||| || |||
Sbjct 671208 CAGATCTTTGTCAAGACTCTGACTGGAAAGACGATCACTTTAGAAGTGGAGTCCTCGGAC 671149
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| |||||||| || || ||||| ||| || ||| ||
Sbjct 671148 ACCATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCAACAG 671089
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | ||||| ||||| ||||| ||||| ||||| | ||| | | || |||||| |
Sbjct 671088 CGATTGATCTTTGCCGGCAAGCAATTGGAGGATGGCCGCACTCTATCTGACTACAACATT 671029
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
||||| ||| || || ||| | || ||||||||||
Sbjct 671028 CAGAAGGAGAGCACCCTCCACTTGGTGCTGAGACTTCG 670991
>seq2
Length=8083196
Score = 91.5 bits (100), Expect = 3e-13
Identities = 169/248 (68%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166
|| ||||| || | ||| | ||| | ||| ||| | ||||| | | | |||| | |
Sbjct 1633038 GCATCCTTATAAAGCATGTATGGCGTCCCAGTCTCGGTTTGAGACTCGAGAATGGCATAC 1633097
Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226
|| || | ||||| || | ||| || ||| |||||| || ||||| |||| |||
Sbjct 1633098 CACAGCTTCTGGGCCTTGATGGTCTGTCGACCTCGTCCTTCCTTCTCGTACTTCTCGTAG 1633157
Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286
|| | ||||| || | ||||| | || ||||||| || || || | || || |||
Sbjct 1633158 AGTGCCTCGAACTCGTCACCGTAGACATCAGCAAGACCAGGGGCCTCGTGTGGGCAGAAG 1633217
Query 173287 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 173346
|| |||| | | || |||| || | || ||||||||| || | ||||||| |||
Sbjct 1633218 AGTGTCCAGTCTTGATTCTTCTCAACACGCTGCATGAAGAGATCCGGGGTCCAAAGGGCG 1633277
Query 173347 TAGAACAA 173354
||||||||
Sbjct 1633278 TAGAACAA 1633285
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820239743077
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |