Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq6 114 2e-19 >seq6 Length=1840879 Score = 114 bits (126), Expect = 2e-19 Identities = 189/266 (71%), Gaps = 14/266 (5%) Strand=Plus/Plus Query 1456520 CAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTG 1456579 || |||||| ||| ||||| | |||||||| || || | | ||| | || || || Sbjct 490750 CACATCATCACCGAAGCCGTGGGCATCGAGAAGGAATTCCTGACCGATGCTCTTCCCGTC 490809 Query 1456580 GCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACC 1456639 | || | || |||||||||| ||| ||| |||||||| || || |||||||||| Sbjct 490810 GGCCTGTTGGGAATGAACGCCAA-GCTGATGCAACAGTACATCGAGTTC-GTCGCCGACC 490867 Query 1456640 GCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCAC---TACCGGACGGCCA--ACCCGTTCC 1456694 ||||||| || || ||| | |||| | ||| ||| ||| |||| |||| Sbjct 490868 GCCTGCTGCTCGCCCTGGGCAAC----AAGCGCGTCTACA--ACGCCCAGAACCCCTTCC 490921 Query 1456695 CATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCG 1456753 | | |||||| |||||||||| |||||||||||| || |||||| || || |||| Sbjct 490922 CCTTCATGGAGAACATCTCGCTCGCGGGCAAGACCAATTTCTTCGAGAAACGTGTCGGCG 490981 Query 1456754 AGTACGCCAAGGCCGGCGTCACCGCC 1456779 | ||| ||||| |||| ||| ||||| Sbjct 490982 ACTACTCCAAGACCGGAGTCGCCGCC 491007 Score = 107 bits (118), Expect = 3e-17 Identities = 189/269 (70%), Gaps = 11/269 (4%) Strand=Plus/Plus Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||||||||| || | ||| || |||| ||||| ||| |||| ||||| Sbjct 490381 ATTGAGAACATCCACTCGGAGATGTACAGTCTTTTGATTGACACGTACATCAACGACCCC 490440 Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131 ||||| | | |||||| ||||| |||||| | || | | | || || ||| Sbjct 490441 AAACAGAAGCAGTATCTCTTTGATGCCATTGACACGATTCCCTGCATCCGCAAGAAAGCC 490500 Query 1456132 GACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCG 1456188 || ||||| ||||||||||| |||||||| || | ||| ||| | || |||| Sbjct 490501 GATTGGGCATTGAAGTGGATCTCGGACAAGGAG----TCCA-GCTTCGCCCAACGACTCG 490555 Query 1456189 TCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCTTTTGG 1456246 | | || |||| ||||||||| || || ||||| ||| |||| ||| ||||||| ||| Sbjct 490556 TGGCGTTCGCCGCCGTCGAGGGTATTTTCTTCTCCGGCTCTTTC-GCGTCCATCTTCTGG 490614 Query 1456247 CTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 || |||| || || |||||||| || Sbjct 490615 CTGAAGAGCAAGGGTCTGATGCCCGGCCT 490643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177807631281994