Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq4 129 6e-25 seq2 84.2 2e-11 >seq4 Length=4536433 Score = 129 bits (142), Expect = 6e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || ||||||||||| || |||||||||||| || || | ||| ||| Sbjct 671231 ACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCTTCG 671290 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || |||||||| || ||||| || || || || || || || || || || ||||| Sbjct 671291 AGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGGGATACCCTCCTTGTCTTGG 671350 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||| || ||| | ||||| |||||||| || || || || |||||||| Sbjct 671351 ATCTTGGATTTCACGTTGTCAATAGTGTCTGACGATTCTACATCCAGGGTGATGGTTTTG 671410 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| | ||| || ||||| |||||||| Sbjct 671411 CCGGTGAGAGTCTTGACGAAGATTTGCAT 671439 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | |||||| || ||||||||||| ||||||||||||| Sbjct 671669 CCACCACGGAGACGGAGAACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTC 671728 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| || || || || || || || |||| |||||||| ||||| || Sbjct 671729 AAGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGA 671788 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || |||||| ||| | |||||| |||||| || Sbjct 671789 ATGCCTTCCTTGTCCTGGATCTTGGATTTGACATTGTCAATGGTGTCGCTCGATTCGACC 671848 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 ||||| || ||||| || ||||| Sbjct 671849 TCGAGCGTGATGGTCTTTCCGGT 671871 Score = 96.9 bits (106), Expect = 4e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 |||| || ||| | ||| || ||| ||||| |||||||||||||| | ||| | Sbjct 670994 AGTCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGATAGAGTGCGG 671053 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | || ||||| ||||| ||||| ||||| || || || || |||||||| Sbjct 671054 CCATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCC 671113 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || ||||| ||| | ||||| || || ||||| || | ||| Sbjct 671114 TTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCACTTCTAAAGTG 671173 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || | ||| || || || || ||||| Sbjct 671174 ATCGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211 >seq2 Length=8083196 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563 ||| ||||| || || || ||||||||||| | |||||| || || | || || Sbjct 3687737 CACAAGGTGCAGGGTTGACTCCTTTTGAATATCATAGTCGGAAAGAGTTCTACCATCCTC 3687796 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 | || || ||||| || ||||| || || ||||| || || ||||| || || ||||| Sbjct 3687797 TAATTGCTTTCCTGCGAAGATCAACCGTTGTTGATCTGGTGGGATGCCCTCCTTATCTTG 3687856 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 || || ||||| ||| | |||||| ||||| || || || |||||||| || Sbjct 3687857 GATCTTAGACTTGACATTGTCGACAGTGTCGCTGGATTCGACCTCAAGTGTAATGGTCTT 3687916 Query 134684 ACCGGT 134689 ||||| Sbjct 3687917 GCCGGT 3687922 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 ||||||| ||||||||||||| | ||| | || ||||| || ||||| || || | Sbjct 5300566 CCTTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGA 5300507 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 ||| |||||||| || || || || ||||| || ||||| || || || || || Sbjct 5300506 TCAGGCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTAACATTGT 5300447 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | || || ||||| || || || || || ||||| || || || | || || |||| Sbjct 5300446 CGATCGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 5300387 Query 134704 A 134704 | Sbjct 5300386 A 5300386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398166253240