Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2 167 3e-36 >seq2 Length=8083196 Score = 167 bits (184), Expect = 3e-36 Identities = 736/1147 (64%), Gaps = 26/1147 (2%) Strand=Plus/Plus Query 69277 GATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACAT 69336 || || ||||| || ||||| ||||||| || | |||| | |||||||| || Sbjct 1632924 GAGGCAAGATTGCAGACTGCAACCTCATCAGGTGCGGTGTATTCGACAATCTCTGTGCAC 1632983 Query 69337 AGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCC 69396 | || || ||| || |||||||| | ||| || ||||| ||||| || || ||| Sbjct 1632984 AAGTTGGAACTCCGGATTGTTCCCAGATTCTTCTGGTTGCTCTTCTTGTTGCACGCATCC 1633043 Query 69397 TTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACG 69456 || ||||| || | || || ||||| || | ||||| |||| ||| | | ||| | Sbjct 1633044 TTATAAAGCATGTATGGCGTCCCAGTCTCGGTTTGAGACTCGAGAATGGCATACCACAGC 1633103 Query 69457 ACCCTAGCATTTATTACGGTCT-TGTAACGCTTC--TCTTTTTCATA-TTGT-GTATATA 69511 | || || || ||||| | | | | || || || || || || | ||| | Sbjct 1633104 TTCTGGGCCTTGAT---GGTCTGTCGACCTCGTCCTTCCTTCTCGTACTTCTCGTAGAGT 1633160 Query 69512 GCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCA 69571 ||| ||||| || || || | |||||| | | ||||| || | ||| || | | Sbjct 1633161 GCC--TCGAACTCGTCACCGTAGACATCAGCAAGACCAGGGGCCTCGTGTGGGCAGAAGA 1633218 Query 69572 ATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGC-T 69630 || ||| | | || | || ||| || | ||| || ||||| || ||||||| || | Sbjct 1633219 GTGTCCAGTCTTGATTCTTCTCAACACGCTGCATGAAGAGATCCGGGGTCCAAAGGGCGT 1633278 Query 69631 ATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAAC 69690 | || || || | | ||| |||||| || || || ||| || | | ||| Sbjct 1633279 AGAACAAG-TCACGTGCTCTGACTTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAAAAG 1633337 Query 69691 TCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTT 69750 || | | |||| ||||||||||| || || || || | | || || || || || Sbjct 1633338 TCAAAGACGTCAGCGTGCCATGGTTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTG 1633397 Query 69751 CCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCA 69810 || || || || | |||| ||| ||||| || | || | |||||| ||||| | ||| Sbjct 1633398 CCACCTTGGTCGACATATCGGGCGGTGTTGTTGAAAACACGCAGCATGGGAATGAGACCG 1633457 Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAG 69868 || || ||||||| || || | ||| ||| || |||| || || | | || | Sbjct 1633458 TTGGAGGTACCATTGGTGCCGGCAATGTAAGAACCGGTTGCCCGGATGCAGTGAGCATTG 1633517 Query 69869 ATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATA 69928 || || || || || || | || ||||| | ||||| || | ||||| || | Sbjct 1633518 --AGTCCAATGCCGCCAGCAGTCTTGGAGATCATGGCACAGATCTTGAGAGTGTCGTAGA 1633575 Query 69929 TACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTG---ATGAT 69985 ||||||| |||||||| || |||||| || | || || |||| ||| ||| Sbjct 1633576 TACCCTCAATGCTATCTTCCTTCATGTCAATCAAGAAGCATGAGGACAGTTGGGCTTGAG 1633635 Query 69986 GTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCA 70045 || || || || || || | || || || ||||| || || || || | ||| | | Sbjct 1633636 GT---GTGCCGGCGTTGAAGAGAGTCGGGGAAGCGTGTGTAAAACACTTCTGAGACATGA 1633692 Query 70046 GATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGC 70104 | ||||| || | |||||| || | ||| | | | || || || | | |||||| Sbjct 1633693 GGTTGTACGTCTGAATAGCCTTCTCGACATCGTCGCCG-TGGATGCCAACGGACACACGC 1633751 Query 70105 ATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTT 70164 || | ||||||||| |||||||| | || || || || | |||||||||| || Sbjct 1633752 ATGAGCATATGCTGTGGTCGTTCCGCAACTTGCTTGCCAATCTTGAGCAGGTATGATCTT 1633811 Query 70165 TCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAA 70224 ||||| || || || ||||| || | ||| ||||||| || || | |||| | || Sbjct 1633812 TCCAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCATAGACAATAGCCGAG 1633871 Query 70225 TTTAGTTTATCCTTATATTTGGTAACTATATCCATAACAGTAG-GTGAGATAATCGGAGA 70283 || || | || || ||| | || || || || | | ||| || || || || Sbjct 1633872 TTCAGCTCCTCTGCATGTTTCATGAC-ATGCCCGTAGGTCTCGTCTGAAATCATAGGGGA 1633930 Query 70284 TCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAG 70343 |||| || || ||||| ||||||| | | | ||| | || | ||| | Sbjct 1633931 GGGTTTGTTGTTCTTGGGATTCACATAGTGGTAGAGATCAGAGACCACGGAAGAGAATTG 1633990 Query 70344 tttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTC 70403 || || || | |||||| | || || | || || | |||||| || || || ||||| Sbjct 1633991 CTTCTTAGTCTGCTTGTGGAGGTTGGAGACAGCAATACGGGCTGCAAGGATGGCGTAGTC 1634050 Query 70404 AGGATGT 70410 |||||| Sbjct 1634051 GGGATGT 1634057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908482304680