Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq2 109 5e-19
seq4 104 2e-17
>seq2
Length=8083196
Score = 109 bits (120), Expect = 5e-19
Identities = 298/450 (66%), Gaps = 15/450 (3%)
Strand=Plus/Plus
Query 131639 TTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTA 131698
|||| ||||| |||| ||| || | |||||| ||| | ||||| |||| || |
Sbjct 1633233 TTCTTCTCAACACGCTGCATGAAGAGATCCGGGGTCCAAAGGGCGTAGAACAAGTCACGT 1633292
Query 131699 GCTTTTTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCA 131758
||| | ||||| | || | ||| || || |||||||| || | ||| ||
Sbjct 1633293 GCTCTGACTTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAAAAGTCAAAGACGTCAGCG 1633352
Query 131759 TGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGCTTA---CCGCCTTGATTAACA 131815
||||| ||||| | || | || | || ||| ||||| || ||||| | |||
Sbjct 1633353 TGCCATGGTTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCTTGGTCGACA 1633412
Query 131816 TGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTG 131875
| || | |||||||| | || |||| |||||| | |||||||| | | ||||||
Sbjct 1633413 TATCGGGCGGTGTTGTTGAAAACACGCAGCATGGGAATGAGACCGTTGGAGGTACCATTG 1633472
Query 131876 GTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC- 131934
|||| |||||| || | || | ||| |||| | ||||||||||| || ||
Sbjct 1633473 GTGCCGGCAATGTAAGAACCGGTTGCCCGGATGCAGTGAGCATTGAGTCCAATGCCGCCA 1633532
Query 131935 GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTC 131994
|| || || ||||| | || || | | ||||||| |||||||| || | ||| ||
Sbjct 1633533 GCAGT-CTTGGAGATCATGGCACAGATCTTGAGAGTGTCGTAGATACCCTCAATGCTATC 1633591
Query 131995 CGCGGCAATGTCGACTAAAAAGCAAGAGGACAACTGTTGG---TGAAATGTGCCGGC--T 132049
| ||||| | || ||||| ||||||| ||||| ||| ||||||||| |
Sbjct 1633592 TTCCTTCATGTCAATCAAGAAGCATGAGGACA---GTTGGGCTTGAGGTGTGCCGGCGTT 1633648
Query 132050 GAAAACAATGTGGGGCTGGCGTGTGTAAAA 132079
||| | | || ||| ||||||||||||
Sbjct 1633649 GAAGAGA--GTCGGGGAAGCGTGTGTAAAA 1633676
>seq4
Length=4536433
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097
||||| ||| | || || || || || || ||||||||| | | || |||||||
Sbjct 671230 TACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCTTC 671289
Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157
||| || || || ||| | || | || ||||| || || || | |||||| || ||
Sbjct 671290 GAGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGGGATACCCTCCTTGTCTTG 671349
Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217
||||||| ||||| | | || | |||||||| | ||| || || || || || | |||
Sbjct 671350 GATCTTGGATTTCACGTTGTCAATAGTGTCTGACGATTCTACATCCAGGGTGATGGTTTT 671409
Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
||| || ||||| || || |||||||||||
Sbjct 671410 GCCGGTGAGAGTCTTGACGAAGATTTGCAT 671439
Score = 95.1 bits (104), Expect = 1e-14
Identities = 144/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 27044 ATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTG 27103
||| || || || ||||| || || ||||| ||||||| | |||| ||||||| || ||
Sbjct 671464 ATGCAAGGTGGATTCTTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCGTCTTCAAGTTG 671523
Query 27104 TTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTT 27163
|| |||||| | || || ||||| || || || || | || || || || |||||
Sbjct 671524 CTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCTTGAATCTT 671583
Query 27164 GTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGT 27223
| ||| | | | || | || || | | ||| || || || || || | ||||| ||
Sbjct 671584 GGATTTGACGTTGTCGATGGTATCGCTCGATTCGACCTCGAGCGTAATGGTCTTGCCGGT 671643
Query 27224 CAGAGTTTTCACAAAGATTTGCATA 27248
||||| || || ||||||||||||
Sbjct 671644 AAGAGTCTTGACGAAGATTTGCATA 671668
Score = 84.2 bits (92), Expect = 2e-11
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| |||| ||||| || ||||| || ||||||||||||| | |||| |||||||
Sbjct 671687 ACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTCAAGGTGCGGCCGTCTTCA 671746
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
|| || || |||||| | || || ||||| || || || || | || || || || |
Sbjct 671747 AGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGG 671806
Query 27159 ATCTTG 27164
||||||
Sbjct 671807 ATCTTG 671812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934208381144
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |