Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2 109 5e-19 seq4 104 2e-17 >seq2 Length=8083196 Score = 109 bits (120), Expect = 5e-19 Identities = 298/450 (66%), Gaps = 15/450 (3%) Strand=Plus/Plus Query 131639 TTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTA 131698 |||| ||||| |||| ||| || | |||||| ||| | ||||| |||| || | Sbjct 1633233 TTCTTCTCAACACGCTGCATGAAGAGATCCGGGGTCCAAAGGGCGTAGAACAAGTCACGT 1633292 Query 131699 GCTTTTTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCA 131758 ||| | ||||| | || | ||| || || |||||||| || | ||| || Sbjct 1633293 GCTCTGACTTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAAAAGTCAAAGACGTCAGCG 1633352 Query 131759 TGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGCTTA---CCGCCTTGATTAACA 131815 ||||| ||||| | || | || | || ||| ||||| || ||||| | ||| Sbjct 1633353 TGCCATGGTTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCTTGGTCGACA 1633412 Query 131816 TGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTG 131875 | || | |||||||| | || |||| |||||| | |||||||| | | |||||| Sbjct 1633413 TATCGGGCGGTGTTGTTGAAAACACGCAGCATGGGAATGAGACCGTTGGAGGTACCATTG 1633472 Query 131876 GTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC- 131934 |||| |||||| || | || | ||| |||| | ||||||||||| || || Sbjct 1633473 GTGCCGGCAATGTAAGAACCGGTTGCCCGGATGCAGTGAGCATTGAGTCCAATGCCGCCA 1633532 Query 131935 GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTC 131994 || || || ||||| | || || | | ||||||| |||||||| || | ||| || Sbjct 1633533 GCAGT-CTTGGAGATCATGGCACAGATCTTGAGAGTGTCGTAGATACCCTCAATGCTATC 1633591 Query 131995 CGCGGCAATGTCGACTAAAAAGCAAGAGGACAACTGTTGG---TGAAATGTGCCGGC--T 132049 | ||||| | || ||||| ||||||| ||||| ||| ||||||||| | Sbjct 1633592 TTCCTTCATGTCAATCAAGAAGCATGAGGACA---GTTGGGCTTGAGGTGTGCCGGCGTT 1633648 Query 132050 GAAAACAATGTGGGGCTGGCGTGTGTAAAA 132079 ||| | | || ||| |||||||||||| Sbjct 1633649 GAAGAGA--GTCGGGGAAGCGTGTGTAAAA 1633676 >seq4 Length=4536433 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 ||||| ||| | || || || || || || ||||||||| | | || ||||||| Sbjct 671230 TACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCTTC 671289 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||| || || || ||| | || | || ||||| || || || | |||||| || || Sbjct 671290 GAGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGGGATACCCTCCTTGTCTTG 671349 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||||| ||||| | | || | |||||||| | ||| || || || || || | ||| Sbjct 671350 GATCTTGGATTTCACGTTGTCAATAGTGTCTGACGATTCTACATCCAGGGTGATGGTTTT 671409 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| || ||||| || || ||||||||||| Sbjct 671410 GCCGGTGAGAGTCTTGACGAAGATTTGCAT 671439 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 27044 ATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTG 27103 ||| || || || ||||| || || ||||| ||||||| | |||| ||||||| || || Sbjct 671464 ATGCAAGGTGGATTCTTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCGTCTTCAAGTTG 671523 Query 27104 TTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTT 27163 || |||||| | || || ||||| || || || || | || || || || ||||| Sbjct 671524 CTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCTTGAATCTT 671583 Query 27164 GTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGT 27223 | ||| | | | || | || || | | ||| || || || || || | ||||| || Sbjct 671584 GGATTTGACGTTGTCGATGGTATCGCTCGATTCGACCTCGAGCGTAATGGTCTTGCCGGT 671643 Query 27224 CAGAGTTTTCACAAAGATTTGCATA 27248 ||||| || || |||||||||||| Sbjct 671644 AAGAGTCTTGACGAAGATTTGCATA 671668 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| |||| ||||| || ||||| || ||||||||||||| | |||| ||||||| Sbjct 671687 ACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTCAAGGTGCGGCCGTCTTCA 671746 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || || || |||||| | || || ||||| || || || || | || || || || | Sbjct 671747 AGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGG 671806 Query 27159 ATCTTG 27164 |||||| Sbjct 671807 ATCTTG 671812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934208381144