Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2 217 2e-51 seq6 95.1 2e-14 >seq2 Length=8083196 Score = 217 bits (240), Expect = 2e-51 Identities = 582/874 (67%), Gaps = 37/874 (4%) Strand=Plus/Plus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 |||||||| | || || | |||||| || || |||||| | ||||| || | | Sbjct 1632912 GGAAGGGCCAGGGAGGCAAGATTGCAGACTGCAACCTCATCAGGTGCGGTGTATTCGACA 1632971 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || ||||| || |||||||||||| || || |||| |||||| ||||| ||||||||| Sbjct 1632972 ATCTCTGTGCACAAGTTGGAACTCCGGATTGTTCCCAGATTCTTCTGGTTGCTCTTCTTG 1633031 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 |||||||||||||| || |||||||| |||||||| ||||| || || || | |||||| Sbjct 1633032 TTGCACGCATCCTTATAAAGCATGTATGGCGTCCCAGTCTCGGTTTGAGACTCGAGAATG 1633091 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGG--CGTTGGCC-CGTCCCTCCGCCTCGTA 111465 || | ||| | | || | | || | |||| || | || ||||| ||| |||||| Sbjct 1633092 GCATACCACAGCTTCTGGGCCTTG----ATGGTCTGTCGACCTCGTCCTTCCTTCTCGTA 1633147 Query 111466 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 111525 ||| |||||| || || ||||| ||||| | || | ||||| || |||| || Sbjct 1633148 CTTCTCGTAGAGTGCCTCGAACTCGTCACCGTAGACATCAGCAAGACCAGGGGCCTCGTG 1633207 Query 111526 TGGACAGAAAAGAGACCA---TTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGG 111582 ||| ||||| || | ||| |||| ||| |||||| |||| |||||| || || || Sbjct 1633208 TGGGCAGAAGAGTGTCCAGTCTTGA--TTCTT-CTCAACACGCTGCATGAAGAGATCCGG 1633264 Query 111583 AATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTC 111641 |||| |||| | || | || | | | | || | ||||| | || ||||| || Sbjct 1633265 GGTCCAAAGGGCGTAGAACAAGTCACGTGCTCTGA-CTTCTTCCTTGCCGTGGTTCTTTC 1633323 Query 111642 GTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATC 111701 | | | | || || | || || ||||||||||| ||||| |||| || | || | Sbjct 1633324 GCAGGTTCAAAAAGTCAAAGACGTCAGCGTGCCATGGTTCAAGGTAGATGGCAAAAGCAC 1633383 Query 111702 CCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAA 111755 | | ||||| ||| |||| | ||||| || || ||| ||| || || || | Sbjct 1633384 C---TGGACGCTTGTTGCCACCTTGGTCGACATATCGGGCGGTGTTGTTGAAAACACGCA 1633440 Query 111756 GCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCT- 111814 |||| ||||| | ||| | || |||||| || || ||| ||| | || | Sbjct 1633441 GCATGGGAATGAGACCGTTGGAGGTACCATTGGTGCCGGCAATGTAAGA---ACCGGTTG 1633497 Query 111815 CTCACATCATGGATGTGCAT----CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACA 111870 | | || | || |||| ||||| || ||||| ||| ||||| ||||| Sbjct 1633498 CCCGGATGCAG--TGAGCATTGAGTCCAATGCCGCCAGCAGTCTTGGAGATCATGGCACA 1633555 Query 111871 CTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCA 111930 | | ||||| | |||||||| | || || ||||| || | || | |||||| Sbjct 1633556 GATCTTGAGAGTGTCGTAGATACCCTCAATGCTATCTTCCTTCATGTCAATCAAGAAGCA 1633615 Query 111931 ACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA 111990 ||||| || | | ||||| || || |||||||| || || | ||||| | || Sbjct 1633616 TGAGGACAGTTGGGCTTGAGGTGTGCCGGCGTTGAAGAGAGTCGGGGAAGCGTGTGT-AA 1633674 Query 111991 CATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGA 112049 | || | || ||||| || ||| |||| | | || | || || ||||||| Sbjct 1633675 AACACTTCTGAGACATGAGGTTGTACGTCTGAATAGCCTTCTCGACATCGTCGCCGTGGA 1633734 Query 112050 TGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 |||| | | || ||||||| ||| | |||||| Sbjct 1633735 TGCCAACGGACACACGCATGAGCATATGCTGTGG 1633768 >seq6 Length=1840879 Score = 95.1 bits (104), Expect = 2e-14 Identities = 199/290 (69%), Gaps = 10/290 (3%) Strand=Plus/Minus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| | ||||| || || || || |||||||| |||||| || || Sbjct 490698 GGCAAAGTCGGTGTGCATGCCCTCGTCGCGCGAGATGAGTTCATTGGAGAAGGTCAGGCC 490639 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGA 122776 ||||| |||||| |||||| ||| | || | ||| ||| || ||||||||||| | Sbjct 490638 GGGCATCAGACCCTTGCTCTTCAGCCAGAAGATGGACGC-GAAAGAGCCGGAGAAGAAAA 490580 Query 122777 TACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCA 122835 ||||||| || || ||||| | || |||| ||||||| | || | ||| | Sbjct 490579 TACCCTCGACGGCGGCGAACGCCACGAGTCGTTGGGCGAAGCTG-GACTCCTTGTCCGAG 490521 Query 122836 AACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCA 122895 | ||| |||| |||||| | || ||||| || || || | || | ||||| ||| Sbjct 490520 ATCCACTTCAATGCCCAATCGGCTTTCTTGCGGATGCAGGGAATCGTGTCAATGGCATCA 490461 Query 122896 AATA---ACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAA 122942 || | ||||||||| || | || || ||||| |||||||||| Sbjct 490460 AAGAGATACTGCTTCTGTTTGG---GGTCGTTGATGTACGTGTCAATCAA 490414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031709535200