Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2 178 1e-39 seq3 161 1e-34 >seq2 Length=8083196 Score = 178 bits (196), Expect = 1e-39 Identities = 506/768 (66%), Gaps = 20/768 (3%) Strand=Plus/Minus Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGA---CTACACGCGT 53236 || ||| || | ||||||| || || | || |||||||| ||||| | | | | | Sbjct 1633768 CCACAGCATATGCTCATGCGTGTGTCCGTTGGCATCCACGGCGACGATGTCGAGAAGGCT 1633709 Query 53237 GTCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTG 53296 | | |||||||| || | ||| || |||| ||||| ||||| | || || || Sbjct 1633708 ATTC---AGACGTACAACCTCATGTCTCAGAAGTGTTTTACACACGCTTCCCCGACTCTC 1633652 Query 53297 TTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGAT 53356 |||||||| || || ||| | || |||| |||||| || | | |||||||| Sbjct 1633651 TTCAACGCCGGCACACCTCAAGCCCAACTGTCCTCATGCTTCTTGATTGACATGAAGGAA 1633592 Query 53357 GACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCG 53416 || || || || |||||||| || |||||| |||||| ||||||||| | Sbjct 1633591 GATAGCATTGAGGGTATCTACGACACTCTCAAGATCTGTGCCATGATCTCCAAGACTGCT 1633532 Query 53417 GGTGGTATCGGTATCCACTGCTCGAA-CGTCCGTGCGAACGGCACACCAATCAAGGGGAC 53475 || || || || || | ||||| | |||| || | ||| | || || || Sbjct 1633531 GGCGGCATTGGACTCAA-TGCTCACTGCATCCGGGCAACCGGTTCTTACATTGCCGGCAC 1633473 Query 53476 GAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTA 53535 || || | || | || || | || ||||| || || ||||||||||| ||||| || Sbjct 1633472 CAATGGTACCTCCAACGGTCTCATTCCCATGCTGCGTGTTTTCAACAACACCGCCCGATA 1633413 Query 53536 CGTCAACCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGC 53594 ||| |||| ||||| ||||| | ||| | | || ||||||||||| || || |||| Sbjct 1633412 TGTCGACCAAGGTGGCAACAAGCGTCCAGGTG-CTTTTGCCATCTACCTTGAACCATGGC 1633354 Query 53595 ACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCT 53654 |||| ||| | | || ||| | | ||||| ||| || || | ||||| | | Sbjct 1633353 ACGCTGACGTCTTTGACTTTTTGAACCTGCGAAAGAACCACGGCAAGGAAGAAGTCAGAG 1633294 Query 53655 GCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAG 53713 |||||| |||| ||| || || |||| ||||| ||||||||||| || |||||| Sbjct 1633293 CACGTGACTTGTTCTAC-GCCCTTTGGACCCCGGATCTCTTCATGCAGCGTGTTGAGAAG 1633235 Query 53714 GACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGT 53773 | | || ||| || | ||||| ||||| ||| || || | |||||||||| Sbjct 1633234 AATCAAGACTGGACACTCTTCTGCCCACACGAGGCCCCTGGTCTTGCTGATGTCTACGGT 1633175 Query 53774 GAGGAGTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCG----CTACAAGAAGAA 53829 || ||||| | | | || || ||||| | || || | || ||| Sbjct 1633174 GACGAGTTCGAGGCACTCTACGAGAAGTACGAGAAGGAAGGACGAGGTCGAC----AGAC 1633119 Query 53830 GGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCC 53889 ||||||| | || | ||| |||| || ||| || || ||||| || ||||| Sbjct 1633118 CATCAAGGCCCAGAAGCTGTGGTATGCCATTCTCGAGTCTCAAACCGAGACTGGGACGCC 1633059 Query 53890 GTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAA 53937 |||||| || |||||| || |||| ||||||||||||||||||| Sbjct 1633058 ATACATGCTTTATAAGGATGCGTGCAACAAGAAGAGCAACCAGAAGAA 1633011 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 ||||||||||| ||||| || || ||||| || ||||| || |||||||| |||||||| Sbjct 1632484 CGCAACTCCCTCCTCGTCGCTCCCATGCCTACTGCGTCCACTTCTCAGATCCTGGGCAAC 1632425 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 ||||| ||||| || ||||| | ||||| ||| ||||| ||| ||||| ||| Sbjct 1632424 AACGAATGCTTCGAACCCTACACCTCGAACATATACTCCCGCCGTGTCCTGGCAGGCGAG 1632365 Query 55604 TT 55605 || Sbjct 1632364 TT 1632363 >seq3 Length=7540789 Score = 161 bits (178), Expect = 1e-34 Identities = 310/457 (68%), Gaps = 0/457 (0%) Strand=Plus/Minus Query 151868 AGCTGAATCCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGG 151927 |||| | ||||| ||||| || || || || ||||| || ||||| || |||| ||| Sbjct 2907133 AGCTCCAACCGGTCCCGATACCATCAGCGCCATTGACAAGGATCATGGGGACAACCGGGA 2907074 Query 151928 CGTAAAACTCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGT 151987 | || | ||| ||||| | || | | | || || | ||| |||||| | | || Sbjct 2907073 CATACACCTCGGGCTCAATCTTCTTATCATCGTCGGTGTTGTACGTCAAAAGAGGCTCGT 2907014 Query 151988 CAGCCGGATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGC 152047 | | ||| | ||| | | |||| | || ||| || ||||||||||| |||| || Sbjct 2907013 CTGACGGGTGGAAAAGCTTGCGAGCAAACGGCGACAACCGAGTGAAGATGTAACGGGCGC 2906954 Query 152048 TGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGT 152107 |||| || || | |||||| || ||||| || || |||||||| || || || | Sbjct 2906953 TGGCGGCGTCGCTTCCACCTTGATTACGAGTTCCGAATTGGCCAGAGGGTTCTAGCAGAT 2906894 Query 152108 TGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCG 152167 | | |||||| | ||||| ||| ||||||| | | || ||||| ||| || || Sbjct 2906893 TAACGTTGTTCGATCCCACAAAAGTCTGAGCGAGACCAACGATCGTCTGCTGTAGTGACG 2906834 Query 152168 CTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCA 152227 | ||||| |||||||| || ||| | || |||| | || ||||| | | || |||| Sbjct 2906833 CGTCACCATGGTGATATGCTGTCATCCCCCCGATCAAACCAGCCAATTCGACTACTTTCA 2906774 Query 152228 TGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCA 152287 ||||| || ||| ||| ||||| || | ||| || ||||| || ||| || |||| Sbjct 2906773 TGTCCTTCTTCAAGTTGCGCTTGAAGCACGTGTACATGACCTTACGTTGGCCAGGCTTCA 2906714 Query 152288 AACCGTCCACCACGTGAGGAATCGAACGCTTGATGTC 152324 ||||| || ||| ||||| || || || |||| Sbjct 2906713 GTCCGTCGACAACGGAGGGAATTGATCGGATGTTGTC 2906677 Score = 102 bits (112), Expect = 9e-17 Identities = 288/441 (65%), Gaps = 1/441 (0%) Strand=Plus/Minus Query 117144 AGCTGAACCCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAA 117203 |||| | || || |||||||| || || ||||| | || ||||| || || || || | Sbjct 2907133 AGCTCCAACCGGTCCCGATACCATCAGCGCCATTGACAAGGATCATGGGGACAACCGGGA 2907074 Query 117204 CGTAGAACTCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGT 117263 | || | ||| ||||| | || | | | ||||| ||| |||| | | | | | || Sbjct 2907073 CATACACCTCGGGCTCAATCTTCTTATCATCGTCGGTGTTGTACGTCAAAAGAGGCTCGT 2907014 Query 117264 CACTCGGATCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGC 117323 | ||| | ||| | || | |||| | | |||||||| |||||||| | || Sbjct 2907013 CTGACGGGTGGAAAAGCTTGCGAGCAAACGGCGACAACCGAGTGAAGATGTAACGGGCGC 2906954 Query 117324 TTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGT 117383 | || || || | ||||| | ||| || |||||||| ||| || || | || | Sbjct 2906953 TGGCGGCGTCGCTTCCACCTTGATTACGAGTTCCGAATTGGCCAGAGGGTTCTAGCAGAT 2906894 Query 117384 TCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCG 117443 | | |||||| | |||||||| | ||||| | || ||||| || || || Sbjct 2906893 TAACGTTGTTCGATCCCACAAAAGTCTGAGCGAGACCAACGATCGTCTGCTGTAGTGACG 2906834 Query 117444 CCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCA 117503 | |||||||||||||| || ||| | || | | | || |||| | | || |||| Sbjct 2906833 CGTCACCATGGTGATATGCTGTCATCCCCCCGATCAAACCAGCCAATTCGACTACTTTCA 2906774 Query 117504 TGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCA 117563 |||| | ||| ||| ||||| ||| | || || ||||| || || | ||||||| Sbjct 2906773 TGTCCTTCTTCAAGTTGCGCTTGAAGCACGTGTACATGACCTTACGTTGGCCAGGCTTCA 2906714 Query 117564 GACCATCCGCCACGTGAGGGA 117584 | || || | ||| |||||| Sbjct 2906713 GTCCGTCGACAACG-GAGGGA 2906694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215746912600