Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq4 152 6e-32
seq2 125 8e-24
seq3 98.7 1e-15
>seq4
Length=4536433
Score = 152 bits (168), Expect = 6e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| |||||||||||||| ||||| || ||||| || || |
Sbjct 671667 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATTACGCTCGAGGTCGAATCGAGC 671608
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || | || | || ||||| |||||||| || |||||||| ||||||
Sbjct 671607 GATACCATCGACAACGTCAAATCCAAGATTCAAGACAAGGAAGGCATTCCTCCCGACCAG 671548
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
||||| || || || || || |||||||| || || | || ||| | ||| || || ||
Sbjct 671547 CAGCGCCTGATCTTCGCCGGAAAGCAACTTGAAGACGGCCGCACCTTGAGC-GATTACAA 671489
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || |||||||| | ||||| ||| | || || || || ||
Sbjct 671488 CATCCAGAAAGAATCCACCTTGCATCTCGTCCTCCGACTCCGTGGCGG 671441
Score = 140 bits (154), Expect = 4e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || || || ||||| || ||| | || || |||||
Sbjct 671211 ATGCAGATCTTTGTCAAGACTCTGACTGGAAAGACGATCACTTTAGAAGTGGAGTCCTCG 671152
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||| | || |||||||||||||| || ||||| ||||||||
Sbjct 671151 GACACCATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCAA 671092
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | || ||||| || |||||| | ||||||| || || ||| | ||||| ||
Sbjct 671091 CAGCGATTGATCTTTGCCGGCAAGCAATTGGAGGATGGCCGCACTCTATCTGACTACAAC 671032
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
| || ||||| ||| || || | || || | ||||||||||| ||
Sbjct 671031 ATTCAGAAGGAGAGCACCCTCCACTTGGTGCTGAGACTTCGCGGTGGTCA 670982
Score = 140 bits (154), Expect = 4e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| || |||||||| || || || || || || || ||
Sbjct 671439 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAAACCATCACCCTGGATGTAGAATCGTCA 671380
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || |||| | || || || ||||||||||| || || ||||||||
Sbjct 671379 GACACTATTGACAACGTGAAATCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAA 671320
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| || | || || || || ||||||||||| || | || || || | ||||| ||
Sbjct 671319 CAACGATTGATCTTCGCAGGCAAGCAACTCGAAGACGGCCGAACTCTTTCCGACTACAAC 671260
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| |||||||||||||||||||| || | | ||||| |||||
Sbjct 671259 ATCCAGAAGGAATCCACTCTTCATCTGGTACTCAGACTTCGTGGTGG 671213
Score = 127 bits (140), Expect = 2e-24
Identities = 152/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||| ||||| || || || ||||| || || | || | ||||| ||| | || |
Sbjct 671871 ACCGGAAAGACCATCACGCTCGAGGTCGAATCGAGCGACACCATTGACAATGTCAAATCC 671812
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || ||||||||||| || |||||||| ||||||||||| || || || || || |||
Sbjct 671811 AAGATCCAGGACAAGGAAGGCATTCCTCCCGACCAGCAGCGCCTGATCTTCGCCGGAAAG 671752
Query 27550 CAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608
||||| || || | || ||| | ||| ||||| || ||||||||||||| ||||| ||
Sbjct 671751 CAACTTGAAGACGGCCGCACCTTGAGC-GACTACAACATCCAAAAGGAATCTACTCTACA 671693
Query 27609 TCTAGTCTTGCGTCTTCGCGGTGG 27632
| || | ||||| || |||||
Sbjct 671692 CTTGGTTCTCCGTCTCCGTGGTGG 671669
>seq2
Length=8083196
Score = 125 bits (138), Expect = 8e-24
Identities = 139/183 (76%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| |||||||| || || |||||||| || || |||||||| ||||| |||| ||
Sbjct 5300385 CTTCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCGGATACGAT 5300444
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
| ||| | ||| | || || || |||||||| ||||| || || ||||||||||| ||
Sbjct 5300445 CGACAATGTTAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCGGACCAGCAGCGCCT 5300504
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592
|| || || || |||||||||||||||| || || | ||| ||||| || ||||||
Sbjct 5300505 GATCTTCGCCGGCAAGCAACTCGAGGATGGCCGCACTTTGAGC-GACTACAACATCCAAA 5300563
Query 27593 AGG 27595
|||
Sbjct 5300564 AGG 5300566
Score = 100 bits (110), Expect = 3e-16
Identities = 133/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| ||||| |||||||| || || | || | | | ||| | ||| ||
Sbjct 3687922 ACCGGCAAGACCATTACACTTGAGGTCGAATCCAGCGACACTGTCGACAATGTCAAGTCT 3687863
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || || || |||||||| || || ||||| || || || | || || || || |||
Sbjct 3687862 AAGATCCAAGATAAGGAGGGCATCCCACCAGATCAACAACGGTTGATCTTCGCAGGAAAG 3687803
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
||| | ||||||| | | || || | |||||| || | |||||||| || || || ||
Sbjct 3687802 CAATTAGAGGATGGTAGAACTCTTTCCGACTATGATATTCAAAAGGAGTCAACCCTGCAC 3687743
Query 27610 CTAGT 27614
|| ||
Sbjct 3687742 CTTGT 3687738
>seq3
Length=7540789
Score = 98.7 bits (108), Expect = 1e-15
Identities = 289/442 (65%), Gaps = 4/442 (1%)
Strand=Plus/Plus
Query 31963 CGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCC 32022
|| || ||||| ||| | ||||| || |||||| || || ||||| || ||| |
Sbjct 2906686 CGATCAATTCCCTCCGTTGTCGACGGACTGAAGCCTGGCCAACGTAAGGTCATGTACACG 2906745
Query 32023 TGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCA 32082
||| ||||| ||| || || |||||||| || | | || | || | | |
Sbjct 2906746 TGCTTCAAGCGCAACTTGAAGAAGGACATGAAAGTAGTCGAATTGGCTGGTTTGATCGGG 2906805
Query 32083 GAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCT 32142
| | || || |||||||| || || ||||| || ||| || || || || |||
Sbjct 2906806 GGGATGACAGCATATCACCATGGTGACGCGTCACTACAGCAGACGATCGTTGGTCTCGCT 2906865
Query 32143 CAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACC 32202
|||| ||||| || | || ||| | || | || || || ||||| || || || ||
Sbjct 2906866 CAGACTTTTGTGGGATCGAACAACGTTAATCTGCTAGAACCCTCTGGCCAATTCGGAACT 2906925
Query 32203 CGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACCCG--TCTCGCAC 32260
|| ||||| | || || || ||| |||||||||||||||| || | |||| |
Sbjct 2906926 CGTAATCAAGGTGGAAGCGACGCCGCCAGCGCCCGTTACATCTTCACTCGGTTGTCGC-C 2906984
Query 32261 CTTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATG 32320
|| | | |||||| ||||| ||||||| ||||| | | | | |||||| || |
Sbjct 2906985 GTTTG-CTCGCAAGCTTTTCCACCCGTCAGACGAGCCTCTTTTGACGTACAACACCGACG 2907043
Query 32321 ACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACG 32380
| | | || | | ||||| | | | || ||||| | || |||||| | || || |
Sbjct 2907044 ATGATAAGAAGATTGAGCCCGAGGTGTATGTCCCGGTTGTCCCCATGATCCTTGTCAATG 2907103
Query 32381 GTGCAGAAGGCATCGGAACGGG 32402
| || || || ||||| || ||
Sbjct 2907104 GCGCTGATGGTATCGGGACCGG 2907125
Score = 95.1 bits (104), Expect = 1e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
|||||||| || || || ||||||||||| || || || || || || |||||||||||
Sbjct 3360294 GACAAGGAAGGCATCCCGCCAGACCAGCAACGCCTCATCTTCGCCGGCAAGCAACTCGAA 3360353
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|| | ||||| || | ||||| || |||| ||||| || ||||| || || ||| |
Sbjct 3360354 GACGGCCGTACTCTCTCCGACTACAACATCCAGAAGGAGTCGACTCTGCACCTGGTCCTC 3360413
Query 27619 CGTCTTCGCGGTGGA 27633
|| || || ||||||
Sbjct 3360414 CGCCTGCGTGGTGGA 3360428
Score = 82.4 bits (90), Expect = 9e-11
Identities = 138/199 (69%), Gaps = 8/199 (4%)
Strand=Plus/Plus
Query 30355 GAAAAAATCTGGATCCCCGAACTCATTTTTGGGCACCTTTTGACAAGCTCCAACTACAAC 30414
|||||||||| || ||||| | || ||||| ||||| | || | || |||||||||
Sbjct 2904964 GAAAAAATCTACATTCCCGAGATGATCTTTGGACACCTCCTTACCGGTTCAAACTACAAC 2905023
Query 30415 GACGAGGAGCAGCGCGTGACGGGTGGACGAAATGGCTACGGTGCAAAGCTCGCCAACGTT 30474
||| | || ||| | || ||||| |||| || ||||||||||| ||| |||| ||
Sbjct 2905024 GACAACGAACAGAAGATCACAGGTGGTAGAAACGGTTACGGTGCAAAACTCTGCAACATT 2905083
Query 30475 TTCAGTTCCCTATTCAAAATCAAA-------ATTAGTGACGGGAAGAAGATATATGAGCA 30527
||||| || |||| || || ||| || |||||||| ||| ||||
Sbjct 2905084 TTCAGCACCGAGTTCATCCTCGAAACCTCCGATTCCAAAC-AGAAGAAGAAATACAAGCA 2905142
Query 30528 GACTTGGACAGATAACATG 30546
||| ||||| | ||||||
Sbjct 2905143 GACCTGGACCAACAACATG 2905161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310136231440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |