Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq4 116 2e-21
>seq4
Length=4536433
Score = 116 bits (128), Expect = 2e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | ||| | || |||||| ||||| ||||||||||| |||||||| || || ||
Sbjct 670985 CCACCGCGAAGTCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAT 671044
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | || || | ||| || |||||||| || || ||||||||||| || ||
Sbjct 671045 AGAGTGCGGCCATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGA 671104
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || |||||||| ||| || | || ||| | ||| ||||| | ||||||
Sbjct 671105 ATGCCTTCCTTGTC-CTGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCAC 671163
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | || ||||| || || || | || || ||||| ||||||||
Sbjct 671164 TTCTAAAGTGATCGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211
Score = 116 bits (128), Expect = 2e-21
Identities = 156/212 (74%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
|||| ||| |||||| ||||| || ||||| || || ||||| ||||| |||||||
Sbjct 671231 ACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCTTCG 671290
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
||||| || || || || || || || |||||||| || || | |||||||||||| |
Sbjct 671291 AGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGGGATACCCTCCTTGTCTTGG 671350
Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCT-TCGCTCTCCACTTCCACGGTTATCGTTT 34675
||| || | ||| ||| | ||| |||||| || | || || |||| ||| || ||||
Sbjct 671351 ATC-TTGGATTTCACGTTGTCAATAGTGTCTGACGAT-TCTACATCCAGGGTGATGGTTT 671408
Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
| ||||| | || || || || || ||||||
Sbjct 671409 TGCCGGTGAGAGTCTTGACGAAGATTTGCATG 671440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729458076621
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |