Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq4 170 4e-37 seq2 120 7e-22 seq3 102 2e-16 >seq4 Length=4536433 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| || || || ||||||||||| || || |||||||| || || | ||| || Sbjct 671218 ACGAAGTCTGAGTACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGT 671277 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || ||||| || ||||||||||||||||| | ||||||||||| || || | || Sbjct 671278 TCGGCCGTCTTCGAGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGGGATACC 671337 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| |||||||| ||||||||| || || ||||| || ||| || || || Sbjct 671338 CTCCTTGTCTTGGATCTTGGATTTCACGTTGTCAATAGTGTCTGACGATTCTACATCCAG 671397 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || ||||||||||| || || | ||||| Sbjct 671398 GGTGATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 671439 Score = 156 bits (172), Expect = 1e-32 Identities = 167/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 |||||||| || || | ||| || ||| ||| || || ||||| || || | || || Sbjct 670991 CGAAGTCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGATAGAGTG 671050 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| |||| |||||||| || ||||| | || |||||||| || |||| ||| Sbjct 671051 CGGCCATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCT 671110 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||| ||||| || ||||| || |||||||| ||| || || || | | Sbjct 671111 TCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCACTTCTAAA 671170 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||||||||| || |||||||| ||||| | |||||| Sbjct 671171 GTGATCGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211 Score = 154 bits (170), Expect = 3e-32 Identities = 172/226 (76%), Gaps = 8/226 (4%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGG 210951 ||| |||| ||||| || || | ||||| ||||| |||||||| ||||| | ||||| Sbjct 671446 ACGGAGTCGGAGGACGAGATGCAAGGTGGATTCTTTCTGGATGTTGTAATCGCTCAAGG- 671504 Query 210952 TCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011 | | || ||||| || ||||| || |||||||| ||||| || ||||| ||||||| | Sbjct 671505 TGCGGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGC 671564 Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCT 211068 |||||||||| || ||||| ||| ||||| |||||||| || ||| ||| |||| Sbjct 671565 CTTCCTTGTCTTGAATCTTGGATTTGACGTTGTCGATGGTATC---GCTCGATTCGACCT 671621 Query 211069 CGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||| || || ||||| || || |||||||| || || | ||||| Sbjct 671622 CGAGCGTAATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 671667 Score = 145 bits (160), Expect = 2e-29 Identities = 151/194 (78%), Gaps = 8/194 (4%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATC 210961 || || | ||| ||||| || || ||||||||||| || || | ||| ||| | || || Sbjct 671684 AGAACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTCAA-GGTGCGGCCGTC 671742 Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 ||| || ||||| || |||||||| ||||| || ||||| ||||||| ||||||||||| Sbjct 671743 TTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTC 671802 Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGAT 211078 ||||||||| ||| || || || |||||||| ||| ||| |||||||| ||||| Sbjct 671803 CTGGATCTTGGATTTGACATTGTCAATGGTGTC---GCTCGATTCGACCTCGAGCGTGAT 671859 Query 211079 CGTCTTTCCCGTGA 211092 |||||||| |||| Sbjct 671860 GGTCTTTCCGGTGA 671873 >seq2 Length=8083196 Score = 120 bits (132), Expect = 7e-22 Identities = 198/283 (70%), Gaps = 6/283 (2%) Strand=Plus/Plus Query 178086 TTCCAAAGTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCA 178145 |||| | ||||| ||||||||||| || ||||| || || ||| | ||| Sbjct 1633003 TTCCCAGATTCTTCTGGTTGCTCTTCTTGTTGCACGCATCCTTATAAAGCATGTATGGCG 1633062 Query 178146 TTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCT 178205 | || ||| | ||||| | |||||||| || ||| |||| |||||| || |||| Sbjct 1633063 TCCCAGTCTCGGTTTGAGACTCGAGAATGGCATACCACAGCTTCTGGGCCTTGATGGTCT 1633122 Query 178206 TTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGA 178265 | || |||||| ||||||||||| | |||||| ||||||| || || |||| Sbjct 1633123 GTCGACCTCGTCCTTCCTTCTCGTACTTCTCGTAGAGTGCCTCGAACTCGTCACCGTAGA 1633182 Query 178266 CATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCA---CTGACCGTCTTCCT 178322 ||||| | ||||| || ||||| | ||||||||||| |||| ||| |||| || Sbjct 1633183 CATCAGCAAGACCAGGGGCCTCGTGTGGGCAGAAGAGTGTCCAGTCTTGA--TTCTT-CT 1633239 Query 178323 TCACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 || || | ||||||||| || | |||||| | ||| ||||| Sbjct 1633240 CAACACGCTGCATGAAGAGATCCGGGGTCCAAAGGGCGTAGAA 1633282 Score = 120 bits (132), Expect = 7e-22 Identities = 136/180 (76%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT 210985 ||||||||||| || || | ||| | | | ||||| || || |||||||| |||||||| Sbjct 5300564 TTTTGGATGTTGTAGTCGCTCAAAG-TGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGAT 5300506 Query 210986 AAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTC 211045 ||||| || ||||| || || | |||||||||||| |||||||| || || || || Sbjct 5300505 CAGGCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTAACATTGTC 5300446 Query 211046 GATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||| || || || || ||||| || ||||| ||||| ||||| || ||||| || || Sbjct 5300445 GATCGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 5300386 Score = 111 bits (122), Expect = 4e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || |||||||| || || ||||| ||||| || | ||| || | ||| || || || Sbjct 3687731 TCTAAGCACAAGGTGCAGGGTTGACTCCTTTTGAATATCATAGTCGGAAAGAGTTCTACC 3687790 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||| || | ||||| ||||||||||| | |||||||| || || || | || ||||| Sbjct 3687791 ATCCTCTAATTGCTTTCCTGCGAAGATCAACCGTTGTTGATCTGGTGGGATGCCCTCCTT 3687850 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || |||||||| || || || |||| ||||| | ||| ||||| || || || Sbjct 3687851 ATCTTGGATCTTAGACTTGACATTGTCGACAGTGTCGCTGGATTCGACCTCAAGTGTAAT 3687910 Query 211079 CGTCTTTCCCGTGA 211092 ||||| || |||| Sbjct 3687911 GGTCTTGCCGGTGA 3687924 >seq3 Length=7540789 Score = 102 bits (112), Expect = 2e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| ||||| ||||| || |||||||| || || | || || | || ||| Sbjct 3360412 AGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCT 3360353 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || || |||||||| |||||||| |||||||| ||||| || || | ||||||||||| Sbjct 3360352 TCGAGTTGCTTGCCGGCGAAGATGAGGCGTTGCTGGTCTGGCGGGATGCCTTCCTTGTC 3360294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151450489505