Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq4 170 4e-37
seq2 120 7e-22
seq3 102 2e-16
>seq4
Length=4536433
Score = 170 bits (188), Expect = 4e-37
Identities = 171/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||||||||| || || || ||||||||||| || || |||||||| || || | ||| ||
Sbjct 671218 ACGAAGTCTGAGTACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGT 671277
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || ||||| || ||||||||||||||||| | ||||||||||| || || | ||
Sbjct 671278 TCGGCCGTCTTCGAGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGGGATACC 671337
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||| |||||||| ||||||||| || || ||||| || ||| || || ||
Sbjct 671338 CTCCTTGTCTTGGATCTTGGATTTCACGTTGTCAATAGTGTCTGACGATTCTACATCCAG 671397
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || || ||||||||||| || || | |||||
Sbjct 671398 GGTGATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 671439
Score = 156 bits (172), Expect = 1e-32
Identities = 167/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
|||||||| || || | ||| || ||| ||| || || ||||| || || | || ||
Sbjct 670991 CGAAGTCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGATAGAGTG 671050
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| ||||| |||| |||||||| || ||||| | || |||||||| || |||| |||
Sbjct 671051 CGGCCATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCT 671110
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||||||||| ||||| || ||||| || |||||||| ||| || || || | |
Sbjct 671111 TCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCACTTCTAAA 671170
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||||||||| || |||||||| ||||| | ||||||
Sbjct 671171 GTGATCGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211
Score = 154 bits (170), Expect = 3e-32
Identities = 172/226 (76%), Gaps = 8/226 (4%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGG 210951
||| |||| ||||| || || | ||||| ||||| |||||||| ||||| | |||||
Sbjct 671446 ACGGAGTCGGAGGACGAGATGCAAGGTGGATTCTTTCTGGATGTTGTAATCGCTCAAGG- 671504
Query 210952 TCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011
| | || ||||| || ||||| || |||||||| ||||| || ||||| ||||||| |
Sbjct 671505 TGCGGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGC 671564
Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCT 211068
|||||||||| || ||||| ||| ||||| |||||||| || ||| ||| ||||
Sbjct 671565 CTTCCTTGTCTTGAATCTTGGATTTGACGTTGTCGATGGTATC---GCTCGATTCGACCT 671621
Query 211069 CGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||| || || ||||| || || |||||||| || || | |||||
Sbjct 671622 CGAGCGTAATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 671667
Score = 145 bits (160), Expect = 2e-29
Identities = 151/194 (78%), Gaps = 8/194 (4%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATC 210961
|| || | ||| ||||| || || ||||||||||| || || | ||| ||| | || ||
Sbjct 671684 AGAACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTCAA-GGTGCGGCCGTC 671742
Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
||| || ||||| || |||||||| ||||| || ||||| ||||||| |||||||||||
Sbjct 671743 TTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTC 671802
Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGAT 211078
||||||||| ||| || || || |||||||| ||| ||| |||||||| |||||
Sbjct 671803 CTGGATCTTGGATTTGACATTGTCAATGGTGTC---GCTCGATTCGACCTCGAGCGTGAT 671859
Query 211079 CGTCTTTCCCGTGA 211092
|||||||| ||||
Sbjct 671860 GGTCTTTCCGGTGA 671873
>seq2
Length=8083196
Score = 120 bits (132), Expect = 7e-22
Identities = 198/283 (70%), Gaps = 6/283 (2%)
Strand=Plus/Plus
Query 178086 TTCCAAAGTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCA 178145
|||| | ||||| ||||||||||| || ||||| || || ||| | |||
Sbjct 1633003 TTCCCAGATTCTTCTGGTTGCTCTTCTTGTTGCACGCATCCTTATAAAGCATGTATGGCG 1633062
Query 178146 TTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCT 178205
| || ||| | ||||| | |||||||| || ||| |||| |||||| || ||||
Sbjct 1633063 TCCCAGTCTCGGTTTGAGACTCGAGAATGGCATACCACAGCTTCTGGGCCTTGATGGTCT 1633122
Query 178206 TTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGA 178265
| || |||||| ||||||||||| | |||||| ||||||| || || ||||
Sbjct 1633123 GTCGACCTCGTCCTTCCTTCTCGTACTTCTCGTAGAGTGCCTCGAACTCGTCACCGTAGA 1633182
Query 178266 CATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCA---CTGACCGTCTTCCT 178322
||||| | ||||| || ||||| | ||||||||||| |||| ||| |||| ||
Sbjct 1633183 CATCAGCAAGACCAGGGGCCTCGTGTGGGCAGAAGAGTGTCCAGTCTTGA--TTCTT-CT 1633239
Query 178323 TCACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365
|| || | ||||||||| || | |||||| | ||| |||||
Sbjct 1633240 CAACACGCTGCATGAAGAGATCCGGGGTCCAAAGGGCGTAGAA 1633282
Score = 120 bits (132), Expect = 7e-22
Identities = 136/180 (76%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT 210985
||||||||||| || || | ||| | | | ||||| || || |||||||| ||||||||
Sbjct 5300564 TTTTGGATGTTGTAGTCGCTCAAAG-TGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGAT 5300506
Query 210986 AAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTC 211045
||||| || ||||| || || | |||||||||||| |||||||| || || || ||
Sbjct 5300505 CAGGCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTAACATTGTC 5300446
Query 211046 GATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||| || || || || ||||| || ||||| ||||| ||||| || ||||| || ||
Sbjct 5300445 GATCGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 5300386
Score = 111 bits (122), Expect = 4e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| || |||||||| || || ||||| ||||| || | ||| || | ||| || || ||
Sbjct 3687731 TCTAAGCACAAGGTGCAGGGTTGACTCCTTTTGAATATCATAGTCGGAAAGAGTTCTACC 3687790
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||| || | ||||| ||||||||||| | |||||||| || || || | || |||||
Sbjct 3687791 ATCCTCTAATTGCTTTCCTGCGAAGATCAACCGTTGTTGATCTGGTGGGATGCCCTCCTT 3687850
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|| |||||||| || || || |||| ||||| | ||| ||||| || || ||
Sbjct 3687851 ATCTTGGATCTTAGACTTGACATTGTCGACAGTGTCGCTGGATTCGACCTCAAGTGTAAT 3687910
Query 211079 CGTCTTTCCCGTGA 211092
||||| || ||||
Sbjct 3687911 GGTCTTGCCGGTGA 3687924
>seq3
Length=7540789
Score = 102 bits (112), Expect = 2e-16
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| ||||| ||||| || |||||||| || || | || || | || |||
Sbjct 3360412 AGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCT 3360353
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| || |||||||| |||||||| |||||||| ||||| || || | |||||||||||
Sbjct 3360352 TCGAGTTGCTTGCCGGCGAAGATGAGGCGTTGCTGGTCTGGCGGGATGCCTTCCTTGTC 3360294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151450489505
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |