Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq4 116 3e-21
>seq4
Length=4536433
Score = 116 bits (128), Expect = 3e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || || || || ||||| ||||||||| | ||||| || ||| ||
Sbjct 671211 ATGCAGATCTTTGTCAAGACTCTGACTGGAAAGACGATCACTTTAGAAGTGGAGTCCTCG 671152
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || || ||| ||||| ||||| | || ||||| |||
Sbjct 671151 GACACCATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCAA 671092
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| || || ||||||||||| ||| |||| || | |||||| || || ||||||
Sbjct 671091 CAGCGATTGATCTTTGCCGGCAAGCAATTGGAGGATGGCCGCACTCTATCTGACTACAAC 671032
Query 23791 ATACAAAAAGAG 23802
|| || || |||
Sbjct 671031 ATTCAGAAGGAG 671020
Score = 98.7 bits (108), Expect = 7e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| || || || || || || || || || ||||| || || || |
Sbjct 671667 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATTACGCTCGAGGTCGAATCGAGC 671608
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || | || | | ||| || ||| ||||| ||||| | || || || ||
Sbjct 671607 GATACCATCGACAACGTCAAATCCAAGATTCAAGACAAGGAAGGCATTCCTCCCGACCAG 671548
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || || ||||| || ||||| ||||||| ||||| || |||||||||||
Sbjct 671547 CAGCGCCTGATCTTCGCCGGAAAGCAACTTGAAGACGGCCGCACCTTGAGCGATTACAAC 671488
Query 23791 ATACAAAAAGAGTCCACATTACAT 23814
|| || ||||| ||||| || |||
Sbjct 671487 ATCCAGAAAGAATCCACCTTGCAT 671464
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009447578796
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |