Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq4 161 2e-34
seq2 120 7e-22
seq3 100 7e-16
>seq4
Length=4536433
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||| || || || || ||||||||||| || |||| ||||| |||| | |||
Sbjct 671218 ACGAAGTCTGAGTACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGT 671277
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|| || ||||| || ||||| || |||||||| | |||||||||||| || || |||||
Sbjct 671278 TCGGCCGTCTTCGAGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGGGATACC 671337
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||||||||||||||| ||||| || || |||||||| | ||| || || |
Sbjct 671338 CTCCTTGTCTTGGATCTTGGATTTCACGTTGTCAATAGTGTCTGACGATTCTACATCCAG 671397
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || ||||| || | ||| || | ||| | ||||||
Sbjct 671398 GGTGATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 671439
Score = 140 bits (154), Expect = 8e-28
Identities = 164/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| |||| ||||| || || | ||||||||||| |||| ||||||||| ||| ||
Sbjct 671446 ACGGAGTCGGAGGACGAGATGCAAGGTGGATTCTTTCTGGATGTTGTAATCGCTCAAGGT 671505
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || ||||| || ||||| || |||||||| || || || |||||||| ||||| ||
Sbjct 671506 GCGGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCC 671565
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||||||| ||||| || || |||||||| || | ||| || || |
Sbjct 671566 TTCCTTGTCTTGAATCTTGGATTTGACGTTGTCGATGGTATCGCTCGATTCGACCTCGAG 671625
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| || |||||||| || | ||| || | ||| | ||||||
Sbjct 671626 CGTAATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 671667
Score = 132 bits (146), Expect = 1e-25
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||||||||| || | |||||| ||| || || || | ||||| || | | |||
Sbjct 670991 CGAAGTCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGATAGAGTG 671050
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| ||||| || | ||||| || || ||||| | ||| |||||||| || ||||| |||
Sbjct 671051 CGGCCATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCT 671110
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| || ||||| ||| || || |||||||| |||| ||||| |||||
Sbjct 671111 TCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCACTTCTAAA 671170
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTT 225698
||||||||||| || |||| ||| ||
Sbjct 671171 GTGATCGTCTTTCCAGTCAGAGTCTT 671196
Score = 123 bits (136), Expect = 6e-23
Identities = 140/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| ||||| ||||| ||||||| ||||| ||| ||| || | || |||
Sbjct 671684 AGAACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTCAAGGTGCGGCCGTCT 671743
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| || |||||||| || || || |||||||| ||||| |||||||||||
Sbjct 671744 TCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCC 671803
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| || ||| || |||||||| | ||| || || | |||||| |||
Sbjct 671804 TGGATCTTGGATTTGACATTGTCAATGGTGTCGCTCGATTCGACCTCGAGCGTGATGGTC 671863
Query 225682 TTGCCCGT 225689
|| || ||
Sbjct 671864 TTTCCGGT 671871
>seq2
Length=8083196
Score = 120 bits (132), Expect = 7e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
||||||| ||||| ||| |||||| | ||||| || || ||||| || ||||||||
Sbjct 5300564 TTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGATC 5300505
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
|| || || ||||| || || || |||||||||||||||||||| ||| ||| |||
Sbjct 5300504 AGGCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTAACATTGTCG 5300445
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|| || || || | || || || | ||||| ||||||||||||| || || | |||
Sbjct 5300444 ATCGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 5300386
Score = 113 bits (124), Expect = 1e-19
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||| || |||||||| || || || || ||||| | || || |||| | |||||| ||
Sbjct 3687731 TCTAAGCACAAGGTGCAGGGTTGACTCCTTTTGAATATCATAGTCGGAAAGAGTTCTACC 3687790
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||| |||| ||||| || |||||||| | |||||||| || || || || || |||||
Sbjct 3687791 ATCCTCTAATTGCTTTCCTGCGAAGATCAACCGTTGTTGATCTGGTGGGATGCCCTCCTT 3687850
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||||||||||| ||| ||| |||| ||||| || ||| || || | || ||
Sbjct 3687851 ATCTTGGATCTTAGACTTGACATTGTCGACAGTGTCGCTGGATTCGACCTCAAGTGTAAT 3687910
Query 225678 CGTCTTGCCCGT 225689
|||||||| ||
Sbjct 3687911 GGTCTTGCCGGT 3687922
>seq3
Length=7540789
Score = 100 bits (110), Expect = 7e-16
Identities = 94/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| ||||| || || || |||| ||||| |||| | ||| | || |||
Sbjct 3360412 AGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCT 3360353
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| || |||||||| || ||||| ||||| ||||| || ||||||||||||
Sbjct 3360352 TCGAGTTGCTTGCCGGCGAAGATGAGGCGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 3360293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530634665678
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |