Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2 170 3e-37 >seq2 Length=8083196 Score = 170 bits (188), Expect = 3e-37 Identities = 628/971 (65%), Gaps = 36/971 (4%) Strand=Plus/Plus Query 77685 GATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACAT 77744 || || ||||| || ||||| ||||||| || || |||| | ||||| || || Sbjct 1632924 GAGGCAAGATTGCAGACTGCAACCTCATCAGGTGCGGTGTATTCGACAATCTCTGTGCAC 1632983 Query 77745 AGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCC 77804 | || || ||| || |||||||| | ||||||||||| || ||||| | ||| Sbjct 1632984 AAGTTGGAACTCCGGATTGTTCCCAGATTCTTCTGGTTGCTCTTCTTGTTGCACGCATCC 1633043 Query 77805 TTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACG 77864 |||||||| || | || ||||| || || | || || |||| ||| | | ||| | | Sbjct 1633044 TTATAAAGCATGTATGGCGTCCCAGTCTCGGTTTGAGACTCGAGAATGGCATACCACA-G 1633102 Query 77865 ACTCTAG-CTTTTATCATAGATTTGTA----TCGCCTCTCTCTTTCATATTGA--GTATA 77917 ||| | | || || | | ||| ||| | || | || || | ||| | Sbjct 1633103 CTTCTGGGCCTTGAT----GGTCTGTCGACCTCGTCCTTCCTTCTCGTACTTCTCGTAGA 1633158 Query 77918 TAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACAT 77977 ||| || || || || || | |||||| | | |||||| || | |||||| | Sbjct 1633159 GTGCC--TCGAACTCGTCACCGTAGACATCAGCAAGACCAGGGGCCTCGTGTGGGCAGAA 1633216 Query 77978 CAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGC 78037 | || |||||| || | || ||| || | ||| |||||||| || |||| || || Sbjct 1633217 GAGTGTCCAGTCTTGATTCTTCTCAACACGCTGCATGAAGAGATCCGGGGTCCAAAGGGC 1633276 Query 78038 AATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAA 78097 || | || || | ||| |||||| || || |||||| || | | ||| Sbjct 1633277 GTAGAACAAGTCACGTGCTCTGACTTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAAAA 1633336 Query 78098 CTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATT 78157 || | | |||| ||||||||||| || || || || | | | || || || || || Sbjct 1633337 GTCAAAGACGTCAGCGTGCCATGGTTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTT 1633396 Query 78158 ACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 78217 || || || || | ||||| ||||||||| || |||| | || ||| ||||| | ||| Sbjct 1633397 GCCACCTTGGTCGACATATCGGGCGGTGTTGTTGAAAACACGCAGCATGGGAATGAGACC 1633456 Query 78218 GTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT--ATTACTAATG 78275 ||| || || ||||| || || | ||| ||| || |||| || || | | || Sbjct 1633457 GTTGGAGGTACCATTGGTGCCGGCAATGTAAGAACCGGTTGCCCGGATGCAGTGAGCATT 1633516 Query 78276 GATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAG 78335 | | || || || || || |||| || || | || || || | || |||||| Sbjct 1633517 G--AGTCCAATGCCGCCAGCAGTCTTGGAGATCATGGCACAGATCTTGAGAGTGTCGTAG 1633574 Query 78336 ATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGA 78395 |||||||| || || || ||| |||||| || | || || |||| ||| ||| Sbjct 1633575 ATACCCTCAATGCTATCTTCCTTCATGTCAATCAAGAAGCATGAGGACAGTTGGGCTTGA 1633634 Query 78396 ACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGA 78455 || || || || || | ||||| || || || ||||| || || | ||| | || Sbjct 1633635 GGTGTGCCGGCGTTGAAGAGAGTCGGGGAAGCGTGTGTAAAACACTTCTGAGACATGAGG 1633694 Query 78456 TTGTATGTTTCAATAGCTGATTCT----AT-GTC-CCATTGATGAATTCCTACCGCTACA 78509 ||||| || | |||||| |||| || ||| || | |||| || || | ||| Sbjct 1633695 TTGTACGTCTGAATAGC--CTTCTCGACATCGTCGCCGTGGATG----CCAACGGACACA 1633748 Query 78510 CGCATCAACATATGCTGAGGTCTTT---CAACCGTCTTATTATTTATTTTCAACAAGTAT 78566 ||||| | ||||||||| |||| || |||| ||| | || || | || |||| Sbjct 1633749 CGCATGAGCATATGCTGTGGTCGTTCCGCAACTTGCTTGCCA---ATCTTGAGCAGGTAT 1633805 Query 78567 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATA 78626 ||| |||||| || || || ||||| || | ||| ||||||| || || | |||| Sbjct 1633806 GATCTTTCCAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCATAGACAATA 1633865 Query 78627 ACAGAATTTAG 78637 | || || || Sbjct 1633866 GCCGAGTTCAG 1633876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668478715680