Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq4 127 5e-24
seq2 109 1e-18
seq3 87.8 4e-12
>seq4
Length=4536433
Score = 127 bits (140), Expect = 5e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|||||||| || ||||||||||| || || || ||||||||||| |||| | |||||
Sbjct 671222 AGTCTGAGTACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGG 671281
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|| ||||| || || || |||||||| | | || ||||| | | ||| || |||
Sbjct 671282 CCGTCTTCGAGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGGGATACCCTCC 671341
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| ||||| || || ||| || | || | ||||||| ||||| || || ||
Sbjct 671342 TTGTCTTGGATCTTGGATTTCACGTTGTCAATAGTGTCTGACGATTCTACATCCAGGGTG 671401
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| |||||||| ||||||||||| ||||||| |||||
Sbjct 671402 ATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 671439
Score = 125 bits (138), Expect = 2e-23
Identities = 164/224 (73%), Gaps = 10/224 (4%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||||| |||||| ||||| | || || ||||| ||||||||||||||| || || |
Sbjct 671449 GAGTCGGAGGACGAGATGCAAGGTGGATTCTTTCTGGATGTTGTAATCGCTCAAGGTGCG 671508
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| ||||| || ||||| ||||||||||| || | ||||||||| | | || |||
Sbjct 671509 GCCGTCTTCAAGTTGCTTT--CCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCT 671566
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTC---TCTACTTCA 152060
||||| |||||||| || |||||| | || | | | || ||| || || ||
Sbjct 671567 TCCTTGTCTTGAATCTTGGATTTGACGTTGTCGATGGTATC---GCTCGATTCGACCTCG 671623
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || ||||| || |||||||| ||||||| |||||
Sbjct 671624 AGCGTAATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 671667
Score = 87.8 bits (96), Expect = 4e-12
Identities = 117/161 (73%), Gaps = 4/161 (2%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || | || |||||||| || |||||||||||||| ||| || || |
Sbjct 671677 GAGACGGAGAACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTCAAGGTGCG 671736
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| ||||| || ||||| ||||||||||| || | ||||||||| | | || |||
Sbjct 671737 GCCGTCTTCAAGTTGCTTT--CCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCT 671794
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTC 152044
||||| || || || || ||||||| | || | | ||||
Sbjct 671795 TCCTTGTCCTGGATCTTGGATTTGACATTGTCAATGGTGTC 671835
>seq2
Length=8083196
Score = 109 bits (120), Expect = 1e-18
Identities = 132/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|||||||||||||| ||| ||||| | ||||| || || || |||||||||||
Sbjct 5300564 TTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGATC 5300505
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
|| | ||||||||||| | |||||||||||| ||||| || || || ||| | ||
Sbjct 5300504 AGGCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTAACATTGTCG 5300445
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
| | || || ||| || ||||| || || || |||||||| || ||||| ||||||
Sbjct 5300444 ATCGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAG 5300385
>seq3
Length=7540789
Score = 87.8 bits (96), Expect = 4e-12
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| || || ||||| ||||| || ||||||||||| |||| | ||| | || ||
Sbjct 3360413 GAGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTC 3360354
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
||| || || ||||||||||| || | |||||||| | || ||| |||||||| ||
Sbjct 3360353 TTCGAGTTGCTTGCCGGCGAAGATGAGGCGTTGCTGGTCTGGCGGGATGCCTTCCTTGTC 3360294
Query 152012 T 152012
|
Sbjct 3360293 T 3360293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820253016827
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |