Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq4 187 5e-42 seq2 138 2e-27 seq3 95.1 3e-14 seq6 84.2 5e-11 >seq4 Length=4536433 Score = 187 bits (206), Expect = 5e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || | ||||||||||| | ||| ||| || |||||||||||||| | Sbjct 671212 ACCACCACGAAGTCTGAGTACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGA 671271 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||| || || ||||| || || || |||||||| ||||||||||| || Sbjct 671272 AAGAGTTCGGCCGTCTTCGAGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGG 671331 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||||||||||| | ||| ||| | || |||||||| || | ||| || Sbjct 671332 GATACCCTCCTTGTCTTGGATCTTGGATTTCACGTTGTCAATAGTGTCTGACGATTCTAC 671391 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| || || || || | |||||| ||||| || ||||| Sbjct 671392 ATCCAGGGTGATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 671439 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || | || |||| || | ||||| || || || ||||||||||||| Sbjct 670984 ACCACCGCGAAGTCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGA 671043 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| | ||| || |||||||||||||| || |||||||| || Sbjct 671044 TAGAGTGCGGCCATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGG 671103 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| || ||||| | || ||| | || || |||||||| | || || Sbjct 671104 AATGCCTTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCAC 671163 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | |||||||||||| || |||| |||||| || || |||||||| Sbjct 671164 TTCTAAAGTGATCGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211 Score = 152 bits (168), Expect = 1e-31 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTC-AGC 282931 || ||||| || || || || ||||| || ||| |||||| ||||||||||| || | Sbjct 671441 CCGCCACGGAGTCGGAGGACGAGATGCAAGGTGGATTCTTTCTGGATGTTGTAATCGCTC 671500 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| || || ||||| || ||||| ||||||| || || ||||| || Sbjct 671501 AAG-GTGCGGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGG 671559 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||||||||| ||||| | ||| ||| | ||||| || || | |||||| Sbjct 671560 AATGCCTTCCTTGTCTTGAATCTTGGATTTGACGTTGTCGATGGTATCGCTCGATTCGAC 671619 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || || ||||| || || | |||||| ||||| || ||||| Sbjct 671620 CTCGAGCGTAATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 671667 Score = 132 bits (146), Expect = 1e-25 Identities = 154/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTC-AG 282930 ||||||||| || || || |||| |||| || ||| ||||||||||||||||| Sbjct 671668 ACCACCACGGAGACGGAGAACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGCT 671727 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| |||||||| || || ||||| || ||||| ||||||| || || ||||| | Sbjct 671728 CAAG-GTGCGGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAG 671786 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||| || |||||||| |||||||| | ||| || | || || ||||| | ||||| Sbjct 671787 GAATGCCTTCCTTGTCCTGGATCTTGGATTTGACATTGTCAATGGTGTCGCTCGATTCGA 671846 Query 283051 CTTCGAGAGTGATCGTCTTACCCGT 283075 | ||||| ||||| ||||| || || Sbjct 671847 CCTCGAGCGTGATGGTCTTTCCGGT 671871 >seq2 Length=8083196 Score = 138 bits (152), Expect = 2e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 ||||||||||||||||| | |||||||||||||| ||||| || ||||| |||||| Sbjct 5300564 TTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGATC 5300505 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | || || ||||| || || || ||||||||||||||||| | || || | ||| Sbjct 5300504 AGGCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTAACATTGTCG 5300445 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || || ||||| | ||||| || || ||||| ||||| ||||||| ||||| ||||| Sbjct 5300444 ATCGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 5300386 Score = 102 bits (112), Expect = 2e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| |||| | ||| || || || | || || ||||| || | ||||| | Sbjct 3687719 ACCACCTCGCAATCTAAGCACAAGGTGCAGGGTTGACTCCTTTTGAATATCATAGTCGGA 3687778 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || | |||||||||| ||| || || || |||||||| |||||||| || || Sbjct 3687779 AAGAGTTCTACCATCCTCTAATTGCTTTCCTGCGAAGATCAACCGTTGTTGATCTGGTGG 3687838 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||| ||||||||||| | || || | |||| |||||| | |||||| Sbjct 3687839 GATGCCCTCCTTATCTTGGATCTTAGACTTGACATTGTCGACAGTGTCGCTGGATTCGAC 3687898 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || || || || ||||| || || Sbjct 3687899 CTCAAGTGTAATGGTCTTGCCGGT 3687922 >seq3 Length=7540789 Score = 95.1 bits (104), Expect = 3e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||||||||| || ||||| || | || || || |||||||||||||| | Sbjct 3360427 CCACCACGCAGGCGGAGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAG 3360368 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| || || ||||| || ||||| ||||| | ||||| ||||| ||| Sbjct 3360367 AGAGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATGAGGCGTTGCTGGTCTGGCGGG 3360308 Query 282993 ATACCCTCCTTGTCT 283007 || || ||||||||| Sbjct 3360307 ATGCCTTCCTTGTCT 3360293 >seq6 Length=1840879 Score = 84.2 bits (92), Expect = 5e-11 Identities = 168/248 (68%), Gaps = 1/248 (0%) Strand=Plus/Plus Query 230158 AACAAATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTT 230217 |||| ||| |||| |||| || | | || ||||| ||| | ||| ||| |||| Sbjct 490748 AACACATCATCACCGAAGCCGTGGGCATCGAGAAGGAATTCCTGACCGATGCTCTTCCCG 490807 Query 230218 GCCGTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATC 230277 | | || | || ||||| || | || ||| || || ||||| ||||| || || | Sbjct 490808 TCGGCCTGTTGGGAATGAACGCCAAGCTGATGCAACAGTACATCGAGTTCGTCGCCGACC 490867 Query 230278 GTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTA 230337 | | | | || || || || || || || ||| || ||||||||||| | || | Sbjct 490868 GCCTGCTGCTCGCCCTGGGCAACAAGCGCGTCTACAACGCCCAGAACCCCTTCCCCTTCA 490927 Query 230338 TGGAGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTA-T 230396 ||||| ||| || ||| ||| || || || |||||||| || |||||| |||| || | Sbjct 490928 TGGAGAACATCTCGCTCGCGGGCAAGACCAATTTCTTCGAGAAACGTGTCGGCGACTACT 490987 Query 230397 CAAAGGCC 230404 | ||| || Sbjct 490988 CCAAGACC 490995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738703780198