Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq4 187 5e-42
seq2 138 2e-27
seq3 95.1 3e-14
seq6 84.2 5e-11
>seq4
Length=4536433
Score = 187 bits (206), Expect = 5e-42
Identities = 178/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || | ||||||||||| | ||| ||| || |||||||||||||| |
Sbjct 671212 ACCACCACGAAGTCTGAGTACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGA 671271
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||| || || ||||| || || || |||||||| ||||||||||| ||
Sbjct 671272 AAGAGTTCGGCCGTCTTCGAGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCTGGTGG 671331
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||||||||||||||| | ||| ||| | || |||||||| || | ||| ||
Sbjct 671332 GATACCCTCCTTGTCTTGGATCTTGGATTTCACGTTGTCAATAGTGTCTGACGATTCTAC 671391
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| || || || || | |||||| ||||| || |||||
Sbjct 671392 ATCCAGGGTGATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 671439
Score = 178 bits (196), Expect = 3e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || | || |||| || | ||||| || || || |||||||||||||
Sbjct 670984 ACCACCGCGAAGTCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGA 671043
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| | ||| || |||||||||||||| || |||||||| ||
Sbjct 671044 TAGAGTGCGGCCATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGG 671103
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || |||||||| || ||||| | || ||| | || || |||||||| | || ||
Sbjct 671104 AATGCCTTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCAC 671163
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| | |||||||||||| || |||| |||||| || || ||||||||
Sbjct 671164 TTCTAAAGTGATCGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211
Score = 152 bits (168), Expect = 1e-31
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTC-AGC 282931
|| ||||| || || || || ||||| || ||| |||||| ||||||||||| || |
Sbjct 671441 CCGCCACGGAGTCGGAGGACGAGATGCAAGGTGGATTCTTTCTGGATGTTGTAATCGCTC 671500
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||| || || ||||| || ||||| ||||||| || || ||||| ||
Sbjct 671501 AAG-GTGCGGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGG 671559
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || ||||||||||| ||||| | ||| ||| | ||||| || || | ||||||
Sbjct 671560 AATGCCTTCCTTGTCTTGAATCTTGGATTTGACGTTGTCGATGGTATCGCTCGATTCGAC 671619
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| || || ||||| || || | |||||| ||||| || |||||
Sbjct 671620 CTCGAGCGTAATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 671667
Score = 132 bits (146), Expect = 1e-25
Identities = 154/205 (75%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTC-AG 282930
||||||||| || || || |||| |||| || ||| |||||||||||||||||
Sbjct 671668 ACCACCACGGAGACGGAGAACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGCT 671727
Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990
|||| |||||||| || || ||||| || ||||| ||||||| || || ||||| |
Sbjct 671728 CAAG-GTGCGGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAG 671786
Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
|||| || |||||||| |||||||| | ||| || | || || ||||| | |||||
Sbjct 671787 GAATGCCTTCCTTGTCCTGGATCTTGGATTTGACATTGTCAATGGTGTCGCTCGATTCGA 671846
Query 283051 CTTCGAGAGTGATCGTCTTACCCGT 283075
| ||||| ||||| ||||| || ||
Sbjct 671847 CCTCGAGCGTGATGGTCTTTCCGGT 671871
>seq2
Length=8083196
Score = 138 bits (152), Expect = 2e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
||||||||||||||||| | |||||||||||||| ||||| || ||||| ||||||
Sbjct 5300564 TTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGATC 5300505
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| || || ||||| || || || ||||||||||||||||| | || || | |||
Sbjct 5300504 AGGCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTAACATTGTCG 5300445
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| || ||||| | ||||| || || ||||| ||||| ||||||| ||||| |||||
Sbjct 5300444 ATCGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 5300386
Score = 102 bits (112), Expect = 2e-16
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| |||| | ||| || || || | || || ||||| || | ||||| |
Sbjct 3687719 ACCACCTCGCAATCTAAGCACAAGGTGCAGGGTTGACTCCTTTTGAATATCATAGTCGGA 3687778
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || | |||||||||| ||| || || || |||||||| |||||||| || ||
Sbjct 3687779 AAGAGTTCTACCATCCTCTAATTGCTTTCCTGCGAAGATCAACCGTTGTTGATCTGGTGG 3687838
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| |||||||| ||||||||||| | || || | |||| |||||| | ||||||
Sbjct 3687839 GATGCCCTCCTTATCTTGGATCTTAGACTTGACATTGTCGACAGTGTCGCTGGATTCGAC 3687898
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
|| || || || ||||| || ||
Sbjct 3687899 CTCAAGTGTAATGGTCTTGCCGGT 3687922
>seq3
Length=7540789
Score = 95.1 bits (104), Expect = 3e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||||||||| || ||||| || | || || || |||||||||||||| |
Sbjct 3360427 CCACCACGCAGGCGGAGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAG 3360368
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || ||||| || || ||||| || ||||| ||||| | ||||| ||||| |||
Sbjct 3360367 AGAGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATGAGGCGTTGCTGGTCTGGCGGG 3360308
Query 282993 ATACCCTCCTTGTCT 283007
|| || |||||||||
Sbjct 3360307 ATGCCTTCCTTGTCT 3360293
>seq6
Length=1840879
Score = 84.2 bits (92), Expect = 5e-11
Identities = 168/248 (68%), Gaps = 1/248 (0%)
Strand=Plus/Plus
Query 230158 AACAAATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTT 230217
|||| ||| |||| |||| || | | || ||||| ||| | ||| ||| ||||
Sbjct 490748 AACACATCATCACCGAAGCCGTGGGCATCGAGAAGGAATTCCTGACCGATGCTCTTCCCG 490807
Query 230218 GCCGTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATC 230277
| | || | || ||||| || | || ||| || || ||||| ||||| || || |
Sbjct 490808 TCGGCCTGTTGGGAATGAACGCCAAGCTGATGCAACAGTACATCGAGTTCGTCGCCGACC 490867
Query 230278 GTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTA 230337
| | | | || || || || || || || ||| || ||||||||||| | || |
Sbjct 490868 GCCTGCTGCTCGCCCTGGGCAACAAGCGCGTCTACAACGCCCAGAACCCCTTCCCCTTCA 490927
Query 230338 TGGAGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTA-T 230396
||||| ||| || ||| ||| || || || |||||||| || |||||| |||| || |
Sbjct 490928 TGGAGAACATCTCGCTCGCGGGCAAGACCAATTTCTTCGAGAAACGTGTCGGCGACTACT 490987
Query 230397 CAAAGGCC 230404
| ||| ||
Sbjct 490988 CCAAGACC 490995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738703780198
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |