Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq4 145 5e-30 seq2 84.2 2e-11 >seq4 Length=4536433 Score = 145 bits (160), Expect = 5e-30 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||| ||||| ||| || ||||||||||| || |||||||| || | || ||| Sbjct 670994 AGTCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGATAGAGTGCGG 671053 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || |||| ||||| |||||||||||||| ||||| || |||| || | |||||| Sbjct 671054 CCATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCC 671113 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| |||||| ||| | | | |||||||| | ||| ||||| || | || Sbjct 671114 TTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCACTTCTAAAGTG 671173 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||| || || ||||| || ||||| ||||| Sbjct 671174 ATCGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211 Score = 114 bits (126), Expect = 9e-21 Identities = 167/234 (71%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||||| | ||||| ||||| ||| ||||| ||||||||||| || Sbjct 671209 CATACCACCACGAAGTCTGAGTACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTC 671268 Query 44167 GG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 || ||||| || |||| || || ||||| || || |||||||| || || || ||| Sbjct 671269 GGAAAGAGTT--CGGCCGTCTTCGAGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCT 671326 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | || | ||| ||||| || ||||| |||| | | || ||||| | ||| Sbjct 671327 GGTGGGATACCCTCCTTGTCTTGGATCTTGGATTTCACGTTGTCAATAGTGTCTGACGAT 671386 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || |||| || || || || || ||||| ||||| ||||||||||||||| Sbjct 671387 TCTACATCCAGGGTGATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCATG 671440 Score = 113 bits (124), Expect = 3e-20 Identities = 144/193 (75%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCG-GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 || || ||||||||||||||| | || | ||| |||| || || ||||| ||||| || Sbjct 671477 TCTTTCTGGATGTTGTAATCGCTCAAGGT-GCGGCCGTCTTCAAGTTGCTTTCCGGCGAA 671535 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||||| |||||||| || | ||| | |||||||| || ||||| | || | || Sbjct 671536 GATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCTTGAATCTT-GGATTTGACGT 671594 Query 44266 T-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 | | ||||| ||| ||||| ||||| | |||||| ||||| || || || ||||| | Sbjct 671595 TGTCGATGGTATCGCTCGATTCGACCTCGAGCGTAATGGTCTTGCCGGTAAGAGTCTTGA 671654 Query 44325 CGAAGATTTGCAT 44337 ||||||||||||| Sbjct 671655 CGAAGATTTGCAT 671667 Score = 100 bits (110), Expect = 2e-16 Identities = 139/190 (73%), Gaps = 6/190 (3%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG-GCGAGTTGGCGCTCGTCGTC 44187 |||| ||| || || ||||||||||||||||| ||| | || | ||| |||| || Sbjct 671687 ACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTCAAGGT-GCGGCCGTCTTC 671745 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| ||||| ||||||| |||||||| || | ||| | |||||||| ||| Sbjct 671746 AAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTG 671805 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| || || ||| | ||||||||| ||||| ||||| | ||| || ||| Sbjct 671806 GATCTTGGATTTGACATTGT--CAATGGTGTCGCTCGATTCGACCTCGAGCGTGATGGTC 671863 Query 44306 TTTCCCGTGA 44315 ||||| |||| Sbjct 671864 TTTCCGGTGA 671873 >seq2 Length=8083196 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/184 (71%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||||||||||||||| ||| | ||| | || || || ||||| ||||| |||| Sbjct 5300566 CCTTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGA 5300507 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 ||| |||||||| || | || | |||||||| || ||||| ||| || ||| Sbjct 5300506 TCAGGCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTAACATTGT 5300447 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || || || | || || ||||| | || || ||||| ||||| |||||||| || Sbjct 5300446 --CGATCGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGAC 5300389 Query 44326 GAAG 44329 |||| Sbjct 5300388 GAAG 5300385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990237666829