Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq4 145 5e-30
seq2 84.2 2e-11
>seq4
Length=4536433
Score = 145 bits (160), Expect = 5e-30
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||||| ||||| ||| || ||||||||||| || |||||||| || | || |||
Sbjct 670994 AGTCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGATAGAGTGCGG 671053
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || |||| ||||| |||||||||||||| ||||| || |||| || | ||||||
Sbjct 671054 CCATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGAATGCCTTCC 671113
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| |||||| ||| | | | |||||||| | ||| ||||| || | ||
Sbjct 671114 TTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCACTTCTAAAGTG 671173
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||||| || || ||||| || ||||| |||||
Sbjct 671174 ATCGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211
Score = 114 bits (126), Expect = 9e-21
Identities = 167/234 (71%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||||| | ||||| ||||| ||| ||||| ||||||||||| ||
Sbjct 671209 CATACCACCACGAAGTCTGAGTACCAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTC 671268
Query 44167 GG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
|| ||||| || |||| || || ||||| || || |||||||| || || || |||
Sbjct 671269 GGAAAGAGTT--CGGCCGTCTTCGAGTTGCTTGCCTGCGAAGATCAATCGTTGTTGGTCT 671326
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284
| || | ||| ||||| || ||||| |||| | | || ||||| | |||
Sbjct 671327 GGTGGGATACCCTCCTTGTCTTGGATCTTGGATTTCACGTTGTCAATAGTGTCTGACGAT 671386
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| || |||| || || || || || ||||| ||||| |||||||||||||||
Sbjct 671387 TCTACATCCAGGGTGATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCATG 671440
Score = 113 bits (124), Expect = 3e-20
Identities = 144/193 (75%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 44147 TCCTTTTGGATGTTGTAATCG-GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|| || ||||||||||||||| | || | ||| |||| || || ||||| ||||| ||
Sbjct 671477 TCTTTCTGGATGTTGTAATCGCTCAAGGT-GCGGCCGTCTTCAAGTTGCTTTCCGGCGAA 671535
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
||||| |||||||| || | ||| | |||||||| || ||||| | || | ||
Sbjct 671536 GATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCTTGAATCTT-GGATTTGACGT 671594
Query 44266 T-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324
| | ||||| ||| ||||| ||||| | |||||| ||||| || || || ||||| |
Sbjct 671595 TGTCGATGGTATCGCTCGATTCGACCTCGAGCGTAATGGTCTTGCCGGTAAGAGTCTTGA 671654
Query 44325 CGAAGATTTGCAT 44337
|||||||||||||
Sbjct 671655 CGAAGATTTGCAT 671667
Score = 100 bits (110), Expect = 2e-16
Identities = 139/190 (73%), Gaps = 6/190 (3%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG-GCGAGTTGGCGCTCGTCGTC 44187
|||| ||| || || ||||||||||||||||| ||| | || | ||| |||| ||
Sbjct 671687 ACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTCAAGGT-GCGGCCGTCTTC 671745
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|| ||||| ||||| ||||||| |||||||| || | ||| | |||||||| |||
Sbjct 671746 AAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTG 671805
Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| || || ||| | ||||||||| ||||| ||||| | ||| || |||
Sbjct 671806 GATCTTGGATTTGACATTGT--CAATGGTGTCGCTCGATTCGACCTCGAGCGTGATGGTC 671863
Query 44306 TTTCCCGTGA 44315
||||| ||||
Sbjct 671864 TTTCCGGTGA 671873
>seq2
Length=8083196
Score = 84.2 bits (92), Expect = 2e-11
Identities = 130/184 (71%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||||||||||||||| ||| | ||| | || || || ||||| ||||| ||||
Sbjct 5300566 CCTTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGA 5300507
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
||| |||||||| || | || | |||||||| || ||||| ||| || |||
Sbjct 5300506 TCAGGCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTAACATTGT 5300447
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| || || || | || || ||||| | || || ||||| ||||| |||||||| ||
Sbjct 5300446 --CGATCGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGAC 5300389
Query 44326 GAAG 44329
||||
Sbjct 5300388 GAAG 5300385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990237666829
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |