Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq4 156 1e-32
seq2 120 7e-22
seq3 96.9 8e-15
>seq4
Length=4536433
Score = 156 bits (172), Expect = 1e-32
Identities = 163/210 (78%), Gaps = 8/210 (4%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980
||||| ||||| || ||||| || || || || || || |||||||| ||| |||
Sbjct 671664 CAAATCTTCGTCAAGACTCTTACCGGCAAGACCATTACGCTCGAGGTCGAATCGAGC--- 671608
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
|| |||||||| ||||||||| |||||||| ||||| ||||| || ||||| ||||||
Sbjct 671607 GATACCATCGACAACGTCAAATCCAAGATTCAAGACAAGGAAGGCATTCCTCCCGACCAG 671548
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAA 178099
|| || || |||||||||||||| || || ||||| || | || |||| |||||| ||
Sbjct 671547 CAGCGCCTGATCTTCGCCGGAAAGCAACTTGAAGACGGCCGCAC-CTTGAGCGATTACAA 671489
Query 178100 CGTCCAAAAAGAATCAACACTGCATCTTGT 178129
| |||| |||||||| || ||||||| ||
Sbjct 671488 CATCCAGAAAGAATCCACCTTGCATCTCGT 671459
Score = 136 bits (150), Expect = 1e-26
Identities = 149/193 (77%), Gaps = 9/193 (5%)
Strand=Plus/Minus
Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATCGAGAACGTCA 177999
|||| ||||| || ||||| |||||||| ||| ||| |||||||| || || ||||
Sbjct 671873 TCACCGGAAAGACCATCACGCTCGAGGTCGAATCGAGC---GACACCATTGACAATGTCA 671817
Query 178000 AACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCG 178059
|| ||||| |||||||| ||||| || ||||| |||||||| || || ||||||||||
Sbjct 671816 AATCCAAGATCCAGGACAAGGAAGGCATTCCTCCCGACCAGCAGCGCCTGATCTTCGCCG 671757
Query 178060 GAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAAAAAGAATCAACA 178118
|||| || || ||||| || | || |||| ||| || ||| ||||||| ||||| ||
Sbjct 671756 GAAAGCAACTTGAAGACGGCCGCAC-CTTGAGCGACTACAACATCCAAAAGGAATCTACT 671698
Query 178119 CTGCATCTTGTTT 178131
|| || |||| ||
Sbjct 671697 CTACA-CTTGGTT 671686
Score = 114 bits (126), Expect = 3e-20
Identities = 138/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || ||||| || ||||| |||||||| | || ||||| ||| |||
Sbjct 671208 CAGATCTTTGTCAAGACTCTGACTGGAAAGACGATCACTTTAGAAGTGGAGTCCTCGGAC 671149
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| |||||||||||||| ||||| || || || ||||| ||
Sbjct 671148 ACCATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCAACAG 671089
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | ||||| ||||| || || | || ||||| | ||||| | || || ||| |
Sbjct 671088 CGATTGATCTTTGCCGGCAAGCAATTGGAGGATGGCCGCACTCTATCTGACTACAACATT 671029
Query 178104 CAAAAAGA 178111
|| || ||
Sbjct 671028 CAGAAGGA 671021
>seq2
Length=8083196
Score = 120 bits (132), Expect = 7e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || || || || || || || |||||||| ||||| || || || || |||
Sbjct 5300386 TTCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCGGATACGATC 5300445
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || || || ||||| || ||||| ||||||||||| ||||||||||| || ||
Sbjct 5300446 GACAATGTTAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCGGACCAGCAGCGCCTG 5300505
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
||||||||||| || || ||||| ||||| | ||| | ||| || ||| |||||||
Sbjct 5300506 ATCTTCGCCGGCAAGCAACTCGAGGATGGCCGCACTTTGAGCGACTACAACATCCAAAA 5300564
Score = 95.1 bits (104), Expect = 3e-14
Identities = 242/362 (67%), Gaps = 15/362 (4%)
Strand=Plus/Plus
Query 214121 TCCCAAAGTTTTTCTGGTTGCTTTT---GCGGCAAATGGCATCTTTGTATGCGATGAAAG 214177
||||| | || ||||||||||| || | ||| ||||| || || ||| | |
Sbjct 1633004 TCCCAGA-TTCTTCTGGTTGCTCTTCTTGTTGCAC---GCATCCTTATAAAGCATGTATG 1633059
Query 214178 GCATTCCCACCTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGA 214237
|| | || |||| ||||| | |||||| || ||| || | |||||||| | |
Sbjct 1633060 GCGTCCCAGTCTCGGTTTGAGACTCGAGAATGGCATACCACAGCTTCTGGGCCTTGATGG 1633119
Query 214238 CCTTTTTGGCTCTTCCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGT 214297
|| | ||| ||| || || |||||||| || || || | ||| || || |||||
Sbjct 1633120 TCTGTCGACCTCGTCCTTCCTTCTCGTACTTCTCGTAGAGTGCCTCGAACTCGTCACCGT 1633179
Query 214298 AGACATCATCAAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCC 214357
|||||||| ||||||| || ||||||| |||||||| || |||| | | ||| | |
Sbjct 1633180 AGACATCAGCAAGACCAGGGGCCTCGTGTGGGCAGAAGAGTGTCCAGTCTTGATTCTTCT 1633239
Query 214358 TGACTCTTTTCATGAAAAGGTCGGAAGTCCAGATTGCATAAAAAATCTCTCTGGCTCTCA 214417
|| | | |||||| || || | ||||| | || || || | || | ||||
Sbjct 1633240 CAACACGCTGCATGAAGAGATCCGGGGTCCAAAGGGCGTAGAACAAGTCACGTGCTC--- 1633296
Query 214418 TAAGGTCATCACCTCCC--GGTTTTTTCGC--GTCGACAAAGTCAAAGATATCAACGTGC 214473
| | || || | | || |||| |||||| || | ||||||||||| ||| |||||
Sbjct 1633297 TGACTTCTTC-CTTGCCGTGGTTCTTTCGCAGGTTCAAAAAGTCAAAGACGTCAGCGTGC 1633355
Query 214474 CA 214475
||
Sbjct 1633356 CA 1633357
>seq3
Length=7540789
Score = 96.9 bits (106), Expect = 8e-15
Identities = 91/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073
||||| ||||| ||||| || ||||||||||| || ||||||||||| || || ||||||
Sbjct 3360294 GACAAGGAAGGCATCCCGCCAGACCAGCAACGCCTCATCTTCGCCGGCAAGCAACTCGAA 3360353
Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
|| || | ||||| |||| || ||| |||| || || || || ||||| || ||
Sbjct 3360354 GACGGCCGTACTCTCTCCGACTACAACATCCAGAAGGAGTCGACTCTGCACCTGGT 3360409
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730629356178
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |