Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01]
37 sequences; 36,366,738 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq4 134 1e-26
seq3 102 8e-17
seq2 91.5 1e-13
>seq4
Length=4536433
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| || | | ||||| || || |||||||||||||||||||| ||||| ||
Sbjct 670985 CCACCGCGAAGTCTCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAT 671044
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || | ||||||||||| || |||| ||||||||||| | ||||
Sbjct 671045 AGAGTGCGGCCATCCTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGA 671104
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || ||||||||| ||| | || | | ||| | | | ||||| ||||||||
Sbjct 671105 ATGCCTTCCTTGTCC-TGAATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCCAC 671163
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | || ||||| || || ||||| ||||| || || ||||||||
Sbjct 671164 TTCTAAAGTGATCGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 671211
Score = 122 bits (134), Expect = 8e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
|||||| || || || | || ||||||| ||| || ||||| ||||| || |||
Sbjct 671440 GCCGCCACGGAGTCGGAGGACGAGATGCAAGGTGGATTCTTTCTGGATGTTGTAATCGCT 671499
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
| |||||| |||| || || ||||| |||||||| ||||||||||| ||||| | ||
Sbjct 671500 CAAGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGG 671559
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
|| || ||||||| | ||| | || | || ||| | | | || |||||||| || |
Sbjct 671560 AATGCCTTCCTTGT-CTTGAATCTTGGATTTGACGTTGTCGATGGTATCGCTCGATTCGA 671618
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | ||| || || || || || || ||||| ||||| || |||||
Sbjct 671619 CCTCGAGCGTAATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 671667
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || || ||||| || ||||| ||||||
Sbjct 671669 CCACCACGGAGACGGAGAACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTC 671728
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| |||||| |||| || || ||||| |||||||| ||||||||||| ||||| | |||
Sbjct 671729 AAGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGA 671788
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || ||||||||| || | || | || || | | | ||||||||||| || ||
Sbjct 671789 ATGCCTTCCTTGTCC-TGGATCTTGGATTTGACATTGTCAATGGTGTCGCTCGATTCGAC 671847
Query 41815 CTCCACCGTTATCGTTTTACCCGT 41838
||| | ||| || || || || ||
Sbjct 671848 CTCGAGCGTGATGGTCTTTCCGGT 671871
>seq3
Length=7540789
Score = 102 bits (112), Expect = 8e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||||| ||||| || ||||||||| ||||| |||||||||
Sbjct 3360427 CCACCACGCAGGCGGAGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAG 3360368
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| ||||| |||||||||||||| || ||||| || ||||| | ||
Sbjct 3360367 AGAGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATGAGGCGTTGCTGGTCTGGCGGG 3360308
Query 41756 ACGCTCTCCTTGTC 41769
| || ||||||||
Sbjct 3360307 ATGCCTTCCTTGTC 3360294
>seq2
Length=8083196
Score = 91.5 bits (100), Expect = 1e-13
Identities = 131/182 (72%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
|||| || ||||| |||||| | ||||| | || ||||| |||||||||||||| |
Sbjct 5300566 CCTTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGA 5300507
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792
|||||||||| ||||||| || | | |||||||| ||| || ||| ||| |
Sbjct 5300506 TCAGGCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTT-AACATTG 5300448
Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851
| | || || |||||| ||||| | || || || || |||||||| ||||| |||
Sbjct 5300447 TCGATCGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACG 5300388
Query 41852 AA 41853
||
Sbjct 5300387 AA 5300386
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303786184400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |