Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq168 118 1e-21 seq133 118 1e-21 seq70 102 8e-17 seq8 102 8e-17 >seq168 Length=68123 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || ||||| ||||| || ||||| | || ||||| | || Sbjct 27749 ATGCAAATCTTTGTCAAGACCCTCACAGGCAAGACAATCACTTTGGAAGTCGAGTCATCC 27690 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | || |||||||| || || | ||||| Sbjct 27689 GACACCATCGACAATGTCAAGTCCAAGATCCAAGATAAAGAGGGTATTCCACCTGACCAA 27630 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||| | |||| ||| ||||||||| |||| || | || || ||| |||||||||| Sbjct 27629 CAGCGATTGATCTTCGCCGGCAAACAGTTGGAAGATGGTCGAACTCTCTCCGACTACAAC 27570 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || ||||||||| | || || ||||| ||| Sbjct 27569 ATTCAGAAGGAGTCAACTCTTCATCTCGTG 27540 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || || ||||| || || || | || |||||| | || Sbjct 27521 ATGCAGATTTTCGTCAAAACCCTAACTGGCAAGACTATTACTCTAGAAGTCGAATCATCC 27462 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | ||||| ||| || | ||||| ||||| ||||| | || ||| Sbjct 27461 GACACGATCGACAATGTCAAGTCAAAGATCCAAGACAAGGAGGGAATCCCACCCGATCAG 27402 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||| | |||| || ||||| || |||| || | || || ||| |||||||||| Sbjct 27401 CAGCGATTGATCTTTGCAGGCAAGCAATTGGAGGATGGTCGAACTCTCTCCGACTACAAC 27342 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 ||||| |||||| ||| |||||| | |||||| Sbjct 27341 ATCCAAAAGGAGAGCACCCTGCATTTGGTGTTG 27309 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| || || ||||||||| |||| || || | | | Sbjct 27977 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACCATCACCCTCGAGGTGGAGTCTAGC 27918 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | | ||| || || | || |||||||| || || | ||||| Sbjct 27917 GATACCATTGACAATGTTAAGTCCAAGATCCAAGATAAAGAGGGTATTCCTCCTGACCAA 27858 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||| | |||| ||| || |||||| |||| || | || || || ||||||||| Sbjct 27857 CAGCGATTGATCTTCGCCGGTAAACAGTTGGAAGATGGTCGAACTCTATCAGACTACAAC 27798 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 |||||||| || |||| || ||||| || ||||| Sbjct 27797 ATCCAGAAAGAATCCACTCTTCATCTTGTCCTGCGC 27762 Score = 89.7 bits (98), Expect = 5e-13 Identities = 133/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772 || || || ||||||||| | || || || ||| ||||| | | |||| ||||| Sbjct 28181 ACCGGAAAGACCATCACCCTTGAGGTGGAGTCCAGCGACACTATTGACAACG-TCAAGTC 28123 Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 || || | || || || ||||| || |||| |||||||| || |||| || ||||| Sbjct 28122 CAAGATCCAGGATAAGGAAGGCATTCCTCCGGATCAGCAACGCCTTATCTTTGCTGGCAA 28063 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 || || || |||| || ||||| | ||| ||||||||||| ||||| | || |||| Sbjct 28062 GCAACTTGAAGACGGCCGTACCCTAAGCGATTACAACATCCAAAAGGAATCTACCTTGCA 28003 Query 40893 TCTAGT 40898 ||| || Sbjct 28002 TCTTGT 27997 >seq133 Length=80503 Score = 118 bits (130), Expect = 1e-21 Identities = 179/251 (71%), Gaps = 8/251 (3%) Strand=Plus/Plus Query 116946 TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCT 117005 |||| ||||||| || || || || ||| || |||||||||| ||||| || | Sbjct 15548 TGTTCGACGCCATTGACACCATTCCCTGCATCCGCAAGAAGGCCGACTGGGCTTTGAAAT 15607 Query 117006 GGATCGCCGGCAGA-GAGGC--CGCC-TTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTC 117061 ||||||| ||| || || || | ||||| |||| ||||| || ||||| || || Sbjct 15608 GGATCGC----AGATGATGCTTCGTCATTCGGTCAGCGTCTGGTAGCATTCGCTGCTGTT 15663 Query 117062 GAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTC 117121 ||||| ||||||| || ||| ||||||||||| || ||| | ||| || ||| Sbjct 15664 GAGGGTATCTTCTTCTCTGGCTCATTCGCCGCCATCTTCTGGTTGAAGGCCAAGGGTCTC 15723 Query 117122 ATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGAC 117181 ||||| || |||| || ||||||| | ||||| | |||||||| |||| |||| Sbjct 15724 ATGCCTGGTTTGACCTTTTCCAACGAGTTGATCTCTCGAGACGAGGGCATGCACACCGAC 15783 Query 117182 TTTGCCTGTTT 117192 |||||||| || Sbjct 15784 TTTGCCTGCTT 15794 Score = 93.3 bits (102), Expect = 4e-14 Identities = 154/222 (69%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 116638 GTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTC 116697 |||| ||||||||| ||||| || || |||||||| | || ||||| |||||||| Sbjct 15097 GTGGAACATGTACAAGCGAGCCGAAGCTTCTTTCTGGACTGCAGAAGAGGTCGACCTGTC 15156 Query 116698 CAAGGACACGAGCGACTGG---GAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCA 116754 ||| || ||||||| | ||| ||||||| | ||| | |||||||| || Sbjct 15157 CAAAGATCTTCACGACTGGCACAACCGCCTGAACGATGATGAGAGATATTTCATCTCCCA 15216 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTT 116814 || ||||| || |||||||| ||| || || || ||||| || ||| ||||| | || Sbjct 15217 TGTTCTGGCTTTCTTCGCCGCTTCCGATGGTATTGTGAACGAAAACCTGATCGAGAGATT 15276 Query 116815 CGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGG 116856 | || || || | | ||||| || |||||||| || Sbjct 15277 CAGCGGTGAAGTTCAAATCCCAGAGGCTCGTTGCTTCTATGG 15318 >seq70 Length=128403 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 || ||| || | ||||| || || ||||||||||| ||||||||| | || || || | Sbjct 69540 AAGAATTCACAGCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTC 69599 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 |||||| | | | | ||||| || |||| ||||| || || || || | || Sbjct 69600 GTCCGACACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCAGA 69659 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| ||| | |||| || || || || || || || | |||||||||| ||| || Sbjct 69660 CCAGCAGCGATTGATCTTTGCCGGAAAGCAACTTGAAGATGGCCGCACCCTCAGCGATTA 69719 Query 40866 CAACATCCAGAAGG 40879 ||||||||| |||| Sbjct 69720 CAACATCCAAAAGG 69733 >seq8 Length=306822 Score = 102 bits (112), Expect = 8e-17 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 40778 TTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGC 40837 |||| ||||| || |||||||| | ||||||||||| || |||| ||| ||||| || | Sbjct 208615 TTCTAGACAAGGAAGGCATCCCACCTGACCAGCAACGTCTGATCTTCGCCGGCAAGCAAC 208556 Query 40838 TGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893 | || |||| || ||||| ||||||||||||||||||||| | || |||||| Sbjct 208555 TCGAGGACGGCCGAACCCTGTCTGACTACAACATCCAGAAGGAGTCGACCCTGCAT 208500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515215934798320