Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq133 125 6e-24 seq168 109 5e-19 seq70 89.7 4e-13 >seq133 Length=80503 Score = 125 bits (138), Expect = 6e-24 Identities = 273/406 (67%), Gaps = 11/406 (3%) Strand=Plus/Plus Query 44786 ATGCCCTGCGTGCGCAGAAAGGCCGAATGGGCGATGAAGTATATTGACGATGAAAAGATA 44845 || |||||| | |||| |||||||| ||||| |||| | || | ||||| Sbjct 15568 ATTCCCTGCATCCGCAAGAAGGCCGACTGGGCTTTGAAATGGATCGCAGATGATGCTTCG 15627 Query 44846 ACTTTGGCCGAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGT 44905 | || | | || |||| |||||||| ||| || || | ||||| || || Sbjct 15628 TCATTCGGTCAGCGTCTGGTAGCATTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCA 15687 Query 44906 TTTGCGGCGATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAAC 44965 || || || || || | |||| ||||||| | ||||| || |||| ||| |||| Sbjct 15688 TTCGCCGCCATCTTCTGGTTGAAGGCCAAGGGTCTCATGCCTGGTTTGACCTTTTCCAAC 15747 Query 44966 GAATTGATTTCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGCCT-CTACTATAATAC 45024 || ||||| || ||||||| || |||||||| ||||||||||| | |||| || || Sbjct 15748 GAGTTGATCTCTCGAGACGAGGGCATGCACACCGACTTTGCCTGCTTATTACTTCAACAC 15807 Query 45025 GAGAGTCGATCAAAAGTTGGACGCGCCCACCGTCAACGA---CATGTTCTCCGAAGCCGT 45081 || | || ||| ||| |||| ||| ||| ||| || | || ||||| Sbjct 15808 ----CTCAACCACAAGCCAGAC---CCCAAGCTCATCGAAGCCATCATCACAGAGGCCGT 15860 Query 45082 GGCCATCGAGATGGAATTTTTTGCTGAGGCTCTGCCCGAATCGTTGGTGGGAATGAACGC 45141 |||||||||| ||||| || | || ||||| ||| | | | || |||||||| Sbjct 15861 TGCCATCGAGAAAGAATTCTTGACCGATGCTCTTCCCTGTGCCCTTCTTGGCATGAACGC 15920 Query 45142 GAATATGATGAGAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTC 45187 || ||||| | |||| || ||||| |||||||| ||||||||| Sbjct 15921 CAAGCTGATGCAACAGTATATCGAGTTCGTCGCCGACCGTCTTCTC 15966 >seq168 Length=68123 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || || | |||||||||||| || | || ||| ||||| |||||||| ||| Sbjct 27294 ACCACCACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGA 27353 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | ||| || |||||| | || || || || |||| | |||||||||||||| || Sbjct 27354 GAGAGTTCGACCATCCTCCAATTGCTTGCCTGCAAAGATCAATCGCTGCTGATCGGGTGG 27413 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGA 118689 || |||||||||||| || ||| || || | |||| ||||| | || | |||| Sbjct 27414 GATTCCCTCCTTGTCTTGGATCTTTGACTTGACATTGTCGATCGTGTCGGATGAT-TCGA 27472 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | || ||||| || || ||||| || ||||||||||| Sbjct 27473 CTTCTAGAGTAATAGTCTTGCCAGTTAGGGTTTTGACGAAAATCTGCAT 27521 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || |||| ||| | ||| | || | || ||||| || ||||||||||| ||| Sbjct 27521 TACCACCTCGTAGTCTAAGCACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGG 27580 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || ||| || | |||||| || ||| |||| | ||||| || || || | Sbjct 27581 AGAGAGTTCGACCATCTTCCAACTGTTTGCCGGCGAAGATCAATCGCTGTTGGTCAGGTG 27640 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || ||||| || ||| || || || || | |||| |||||| | ||||| Sbjct 27641 GAATACCCTCTTTATCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGATGACTCGA 27700 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | || ||||| || || || || ||||| || ||||| Sbjct 27701 CTTCCAAAGTGATTGTCTTGCCTGTGAGGGTCTTGACAAAGATTTGCAT 27749 >seq70 Length=128403 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 ||||| |||||||||||||| | ||||| ||| || || || ||||| || |||| Sbjct 69731 TTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCAAGTTGCTTTCCGGCAAAGATC 69672 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 | |||||||| || ||||| || || ||||||||| ||| || || || | ||| Sbjct 69671 AATCGCTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCG 69612 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729 | |||||| | ||| ||||| | ||| | || ||||| || || || || || || Sbjct 69611 ATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 69553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433827719334844