Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq72 89.7 1e-12 seq120 86.0 1e-11 >seq72 Length=126438 Score = 89.7 bits (98), Expect = 1e-12 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || || || ||||||||||| ||||| || ||||||||||| || || |||||| Sbjct 92998 CCGCCGGCGGTCTTGGAGATCATTGCACAGGTTTTGAGAGTATCATAGATGCCTTCAATG 92939 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACT-GTTCCACA 94910 || ||| | | | | | | |||||| || || | |||||| ||| || ||| Sbjct 92938 CTGTCAGACTTCATGTCAATCAAGAAGCAAGATGACAACTGGGGT-TGAGGAGTGCCAGC 92880 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 || || || || || || ||||| ||||| | | | |||||||| | ||||| || Sbjct 92879 GTTGAAGAGGGTTGGCGAGGCATGAGTAAAGCACTTCTGGGACATGAGGTTGTATGTCTC 92820 Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCAT 95018 |||| | || || ||| ||||||||||| || ||||||||||| Sbjct 92819 AATGGCCTTTTCGACGTCGTTGCCGTGAATGCCCACGGCCACACGCAT 92772 >seq120 Length=88359 Score = 86.0 bits (94), Expect = 1e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 35327 ATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGAT 35386 || ||||||||| ||| || ||||| || || ||| | |||| ||| || ||| Sbjct 36870 ATCCACATCTGGGACGGCAACGGGTCACGCGAGTTTCTTGACAAATTAGGATTCACCGAG 36929 Query 35387 AGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAA 35446 ||| |||||| |||||||| || |||||||| ||||||||||| ||||| || || || Sbjct 36930 CGAGAAGAGGGTGATTTGGGTCCAGTATACGGGTTCCAATGGCGACATTTCGGCGCCGAG 36989 Query 35447 TA 35448 || Sbjct 36990 TA 36991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989577571724185