Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq168 140 2e-28 >seq168 Length=68123 Score = 140 bits (154), Expect = 2e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||||||||| ||||||||||| | |||||||||||||| | ||||| ||||| Sbjct 27295 CCACCACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAG 27354 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || || | || |||||||| ||||| ||||| ||||||||||| ||||||| || Sbjct 27355 AGAGTTCGACCATCCTCCAATTGCTTGCCTGCAAAGATCAATCGCTGCTGATCGGGTGGG 27414 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | || || || || |||| ||||| || | | |||||| | ||||| Sbjct 27415 ATTCCCTCCTTGTCTTGGATCTTTGACTTGACATTGTCGATCGTGTCGGATGATTCGACT 27474 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || ||||| || || ||||| ||||| || ||||| ||||| Sbjct 27475 TCTAGAGTAATAGTCTTGCCAGTTAGGGTTTTGACGAAAATCTGCAT 27521 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || || ||||| | ||| | ||| | ||| |||||| || | ||||| ||||| Sbjct 27523 CCACCTCGTAGTCTAAGCACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGAG 27582 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || || | || ||||| ||||||||||| || |||||||||||||| || | || Sbjct 27583 AGAGTTCGACCATCTTCCAACTGTTTGCCGGCGAAGATCAATCGCTGTTGGTCAGGTGGA 27642 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||| ||||| || |||| ||||| || | | |||||| | |||||| Sbjct 27643 ATACCCTCTTTATCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGATGACTCGACT 27702 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || || || || || || || ||||| |||||||| Sbjct 27703 TCCAAAGTGATTGTCTTGCCTGTGAGGGTCTTGACAAAGATTTGCAT 27749 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | | || | ||| | |||| || || || | ||||| || || Sbjct 27751 CCACCACGGAGGCGCAGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCTGAT 27810 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || || | || ||||| ||||| ||||| || |||||||||||||| || | || Sbjct 27811 AGAGTTCGACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCAGGAGGA 27870 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||| ||||| || |||| || || || ||| || |||| || ||| || Sbjct 27871 ATACCCTCTTTATCTTGGATCTTGGACTTAACATTGTCAATGGTATCGCTAGACTCCACC 27930 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || |||||||| ||||| || || || |||||||| Sbjct 27931 TCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 27977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381367243493406